Standard name
Description Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.25 0.53 0.59 0.67 0.77 0.65 0.73 0.53 0.63 0.51 0.56 0.42 0.65 0.69 0.22 0.19 0.12 0.15 0.34 0.26 0.27 0.31 0.29
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0.08 0 0 0 0 0 0 0 0 0 0.07 0 0.05 0 0 0 0.06 0 0 0 0 0.05
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.56 0.12 0 0 0 0.24 0.09 0.4 0.26 0.47 0.38 0.05 0 0 0.05 0 0 0.15 0.07 0.12 0.09 0.07 0
Nucleus 0.25 0.18 0.32 0.25 0.14 0.18 0.15 0.17 0.18 0.21 0.16 0.35 0.26 0.15 0.72 0.81 0.76 0.23 0.24 0.21 0.24 0.2 0.17
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0.12 0 0 0 0.06 0.11 0.09
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0.06 0.09 0.07 0.07 0.1
Vac/Vac Membrane 0.12 0.21 0.06 0 0 0 0 0 0 0 0 0.17 0.05 0.15 0 0 0.06 0.19 0.17 0.16 0.13 0.15 0.17
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0
Bud 0 0 0 0 2 0 0 3 2 5 0 0 0 0 0 0 0 0 3 0 1 2 2
Bud Neck 0 0 1 1 5 5 5 3 7 4 4 0 0 0 0 0 0 0 0 0 1 1 1
Bud Site 0 0 0 0 0 1 1 1 0 12 4 0 0 0 1 0 0
Cell Periphery 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 4 59 40 149 266 150 228 124 153 140 176 17 92 119 13 5 2 10 48 28 22 44 43
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 2 1 0 2
Endosome 0 9 1 6 8 4 7 1 4 1 2 3 6 8 0 0 0 4 3 3 1 4 7
Golgi 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
Mitochondria 9 13 0 8 6 56 28 92 62 129 120 2 4 1 3 0 0 10 10 12 7 10 6
Nucleus 4 20 22 55 49 42 47 40 43 59 50 14 37 26 42 21 13 16 34 22 20 28 24
Nuclear Periphery 0 0 0 0 0 0 0 1 1 2 3 0 0 1 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 2 1 0 0 0 1 1 4 0 1 0 4 0 2 2 3 4 5 15 13
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 5 9 14 1 12 3 3 11 8 0 3 3 0 0 0 5 8 9 5 10 15
Vac/Vac Membrane 2 23 4 3 13 6 13 10 4 6 3 7 7 26 0 0 1 12 24 17 10 20 25
Unique Cell Count 16 112 68 222 347 232 313 232 243 275 315 40 141 173 58 26 17 70 144 109 83 142 149
Labelled Cell Count 19 124 73 233 364 266 341 280 280 370 374 43 150 185 66 26 18 70 144 109 83 142 149


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.2 4.4 4.9 4.7 5.0 3.8 4.4 3.8 3.8 3.7 3.6 4.6 4.9 4.9 8.5 8.8 8.3 4.7 4.5 4.7
Std Deviation (1e-4) 0.3 1.1 1.0 1.6 1.4 1.6 1.8 1.6 1.2 1.4 0.8 1.3 1.2 1.4 2.1 2.2 3.0 2.3 1.7 2.0
Intensity Change (Log2) -0.05 0.04 -0.36 -0.17 -0.37 -0.37 -0.42 -0.45 -0.1 0.0 -0.01 0.79 0.84 0.75 -0.07 -0.13 -0.06


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Yaf9-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available