Standard name | |
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Human Ortholog | |
Description | Ribosomal 60S subunit protein L12B; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12B has a paralog, RPL12A, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 2 | 3 | 2 | 4 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 0 | 1 | 0 | – | 1 | 3 | 10 | 6 | 1 | 1 | 0 | 3 | 4 | 2 | 9 | 0 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 198 | 292 | 121 | 58 | 92 | 65 | – | 85 | 73 | 60 | 50 | 30 | 231 | 226 | 254 | 337 | 334 | 399 | 180 | 278 | 117 | 181 | 280 | 299 |
Endoplasmic Reticulum | 0 | 3 | 0 | 0 | 1 | 0 | – | 12 | 8 | 15 | 6 | 7 | 5 | 2 | 5 | 18 | 22 | 23 | 0 | 5 | 6 | 5 | 13 | 9 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 5 | 2 | 2 | 3 | 5 | 0 | 0 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 1 | 1 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | – | 2 | 5 | 4 | 10 | 8 | 0 | 0 | 0 | 0 | 5 | 12 | 0 | 0 | 0 | 1 | 1 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | – | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 3 | 9 | 1 | 5 | 0 | 5 | 5 | 5 |
Unique Cell Count | 198 | 296 | 122 | 58 | 93 | 66 | 105 | 88 | 85 | 69 | 47 | 233 | 229 | 260 | 344 | 346 | 425 | 191 | 301 | 132 | 203 | 317 | 331 | |
Labelled Cell Count | 198 | 296 | 122 | 58 | 94 | 66 | 109 | 94 | 93 | 80 | 53 | 237 | 229 | 264 | 360 | 368 | 457 | 191 | 301 | 132 | 203 | 317 | 331 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 221.9 | 253.4 | 118.6 | 134.0 | 114.5 | 103.4 | – | 83.8 | 71.4 | 72.6 | 68.6 | 62.9 | 191.3 | 180.5 | 170.8 | 228.5 | 219.3 | 216.0 | 190.5 | 195.6 | 204.6 |
Std Deviation (1e-4) | 52.3 | 64.5 | 39.3 | 38.0 | 38.6 | 37.9 | – | 27.7 | 22.7 | 22.2 | 23.8 | 20.3 | 54.9 | 62.3 | 54.2 | 77.4 | 71.5 | 76.9 | 67.5 | 70.6 | 73.4 |
Intensity Change (Log2) | – | – | – | 0.18 | -0.05 | -0.2 | – | -0.5 | -0.73 | -0.71 | -0.79 | -0.92 | 0.69 | 0.61 | 0.53 | 0.95 | 0.89 | 0.86 | 0.68 | 0.72 | 0.79 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.7 | -0.2 | -0.4 | – | -4.7 | -4.4 | -6.1 | -5.8 | -6.7 | 0 | -0.4 | -1.0 | -0.9 | -1.5 | -2.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 3.8 | 0 | 4.8 | 0 | 0 | 0 | 0 | 0 | 0 | 2.9 | 2.6 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 227.9761 | 294.6392 | 259.552 | 290.7605 | 240.0931 | 263.6969 | 200.4166 | 270.073 | 231.7443 | 262.815 | 226.7108 | 216.0426 | 171.8682 | 315.3212 | 269.5141 | 225.5476 | 153.1848 | 244.6882 |
Actin | 0.0127 | 0.0012 | 0.0119 | 0.0008 | 0.0006 | 0.0343 | 0.0135 | 0.0008 | 0.0107 | 0.0008 | 0.0017 | 0.0054 | 0.0171 | 0.0012 | 0.0055 | 0.0013 | 0.0111 | 0.0065 |
Bud | 0.007 | 0.0039 | 0.0079 | 0.0027 | 0.0033 | 0.0086 | 0.0055 | 0.0037 | 0.0051 | 0.0034 | 0.0064 | 0.0163 | 0.0056 | 0.0032 | 0.0084 | 0.0035 | 0.0115 | 0.0191 |
Bud Neck | 0.0013 | 0.0017 | 0.0018 | 0.0013 | 0.0022 | 0.006 | 0.0015 | 0.0009 | 0.0018 | 0.001 | 0.0012 | 0.0026 | 0.0011 | 0.0007 | 0.0018 | 0.0015 | 0.0026 | 0.0031 |
Bud Periphery | 0.0081 | 0.0024 | 0.0068 | 0.002 | 0.0015 | 0.0075 | 0.0078 | 0.0026 | 0.0045 | 0.0018 | 0.0057 | 0.0347 | 0.0071 | 0.0019 | 0.008 | 0.0028 | 0.0278 | 0.0185 |
Bud Site | 0.0036 | 0.003 | 0.0048 | 0.0008 | 0.0004 | 0.0019 | 0.0031 | 0.002 | 0.0026 | 0.0005 | 0.0007 | 0.0015 | 0.0035 | 0.0031 | 0.0035 | 0.0021 | 0.0014 | 0.0038 |
Cell Periphery | 0.0774 | 0.0617 | 0.0535 | 0.1009 | 0.0339 | 0.035 | 0.0865 | 0.0505 | 0.0465 | 0.0641 | 0.0169 | 0.0163 | 0.0663 | 0.0271 | 0.0537 | 0.0506 | 0.0155 | 0.0552 |
Cytoplasm | 0.3839 | 0.6335 | 0.5427 | 0.2026 | 0.5403 | 0.5366 | 0.398 | 0.7288 | 0.5023 | 0.3425 | 0.5455 | 0.3589 | 0.3655 | 0.7797 | 0.6353 | 0.3267 | 0.4126 | 0.5896 |
Cytoplasmic Foci | 0.0068 | 0.0013 | 0.0109 | 0.001 | 0.0039 | 0.0106 | 0.0084 | 0.0013 | 0.0062 | 0.0015 | 0.0022 | 0.0072 | 0.0115 | 0.0019 | 0.0046 | 0.0135 | 0.02 | 0.0023 |
Eisosomes | 0.0023 | 0.0005 | 0.0008 | 0.0001 | 0.0015 | 0.002 | 0.0019 | 0 | 0.0006 | 0 | 0.0001 | 0.0001 | 0.0036 | 0.0004 | 0.0006 | 0.0011 | 0.0007 | 0.0004 |
Endoplasmic Reticulum | 0.0394 | 0.0136 | 0.0245 | 0.0014 | 0.018 | 0.0241 | 0.0364 | 0.0066 | 0.0101 | 0.0017 | 0.002 | 0.0149 | 0.0355 | 0.0068 | 0.0055 | 0.0103 | 0.0044 | 0.0053 |
Endosome | 0.0086 | 0.0035 | 0.0077 | 0.0036 | 0.0133 | 0.0273 | 0.008 | 0.0022 | 0.0154 | 0.0062 | 0.0099 | 0.0375 | 0.0243 | 0.0031 | 0.0074 | 0.0175 | 0.0131 | 0.0065 |
Golgi | 0.0025 | 0.0005 | 0.004 | 0.0003 | 0.0009 | 0.024 | 0.0068 | 0.0004 | 0.0097 | 0.0008 | 0.0005 | 0.0067 | 0.0043 | 0.0005 | 0.0022 | 0.0022 | 0.0047 | 0.0022 |
Lipid Particles | 0.0034 | 0.0012 | 0.0025 | 0.0035 | 0.0107 | 0.0065 | 0.0035 | 0.0013 | 0.0093 | 0.0015 | 0.0012 | 0.0025 | 0.0091 | 0.0014 | 0.0034 | 0.0193 | 0.0037 | 0.0066 |
Mitochondria | 0.0606 | 0.0113 | 0.0213 | 0.0028 | 0.0039 | 0.0459 | 0.0366 | 0.0034 | 0.0132 | 0.0029 | 0.0162 | 0.0477 | 0.0588 | 0.0124 | 0.0144 | 0.0144 | 0.0804 | 0.0833 |
None | 0.0106 | 0.0009 | 0.0071 | 0.0007 | 0.0094 | 0.0056 | 0.0055 | 0.0007 | 0.0029 | 0.0009 | 0.0008 | 0.0022 | 0.0181 | 0.002 | 0.0043 | 0.023 | 0.0423 | 0.0028 |
Nuclear Periphery | 0.0573 | 0.0148 | 0.014 | 0.0279 | 0.0145 | 0.0301 | 0.0651 | 0.0052 | 0.0125 | 0.0082 | 0.0223 | 0.0246 | 0.1048 | 0.01 | 0.0156 | 0.0301 | 0.0261 | 0.0357 |
Nucleolus | 0.0087 | 0.0029 | 0.0072 | 0.015 | 0.0031 | 0.0073 | 0.0087 | 0.0015 | 0.0122 | 0.0053 | 0.0026 | 0.0066 | 0.021 | 0.0071 | 0.008 | 0.0363 | 0.0089 | 0.004 |
Nucleus | 0.0324 | 0.0178 | 0.0169 | 0.0269 | 0.0146 | 0.0146 | 0.0348 | 0.006 | 0.0122 | 0.0166 | 0.0144 | 0.0586 | 0.0343 | 0.0117 | 0.0183 | 0.0385 | 0.0379 | 0.0311 |
Peroxisomes | 0.0006 | 0.0003 | 0.0008 | 0.0003 | 0.0003 | 0.0021 | 0.0006 | 0.0002 | 0.0009 | 0.0002 | 0.0002 | 0.0013 | 0.0012 | 0.0003 | 0.0006 | 0.001 | 0.0016 | 0.0006 |
Punctate Nuclear | 0.0004 | 0.0001 | 0.0009 | 0.0001 | 0.0002 | 0.0004 | 0.0006 | 0 | 0.0004 | 0.0001 | 0.0001 | 0.0006 | 0.0028 | 0.0001 | 0.0003 | 0.0021 | 0.0006 | 0.0003 |
Vacuole | 0.1924 | 0.1854 | 0.1862 | 0.3624 | 0.2231 | 0.0972 | 0.207 | 0.16 | 0.2573 | 0.4147 | 0.2255 | 0.2125 | 0.1383 | 0.104 | 0.1588 | 0.2844 | 0.1924 | 0.0827 |
Vacuole Periphery | 0.08 | 0.0386 | 0.0657 | 0.2429 | 0.1003 | 0.0724 | 0.0602 | 0.0219 | 0.0637 | 0.1253 | 0.1238 | 0.1414 | 0.0662 | 0.0215 | 0.0397 | 0.1177 | 0.0807 | 0.0406 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 2512.5716 | 2606.5684 | 3105.574 | 2528.541 | 2723.3339 | 2347.3117 | 2363.6377 | 2146.4353 | 2333.624 | 2204.555 |
Translational Efficiency | 1.4016 | 1.3947 | 1.2056 | 1.4002 | 1.5806 | 1.5314 | 1.3839 | 1.4737 | 1.4159 | 1.481 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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