Standard name | |
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Human Ortholog | |
Description | Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 3 | 5 |
Bud | 3 | 1 | 0 | 0 | 0 | 1 | 0 | – | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 16 | 24 |
Bud Neck | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 2 | 1 | 0 | 4 | 1 | – | 4 | 2 | 4 | 1 | 1 | 1 | 2 | 8 | 8 | 7 | 0 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 116 | 211 | 202 | 152 | 231 | 179 | 179 | – | 146 | 204 | 92 | 135 | 430 | 589 | 704 | 589 | 387 | 431 | 130 | 214 | 194 | 354 | 492 | 707 |
Endoplasmic Reticulum | 0 | 0 | 2 | 0 | 1 | 1 | 0 | – | 0 | 5 | 4 | 0 | 3 | 2 | 2 | 26 | 13 | 15 | 0 | 1 | 0 | 1 | 6 | 5 |
Endosome | 0 | 0 | 2 | 0 | 0 | 0 | 1 | – | 1 | 0 | 1 | 1 | 0 | 2 | 0 | 2 | 0 | 1 | 0 | 1 | 1 | 3 | 3 | 4 |
Golgi | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
Mitochondria | 1 | 10 | 0 | 1 | 0 | 9 | 17 | – | 35 | 49 | 36 | 56 | 0 | 0 | 0 | 6 | 3 | 4 | 0 | 6 | 1 | 1 | 5 | 3 |
Nucleus | 2 | 1 | 1 | 0 | 1 | 0 | 7 | – | 4 | 17 | 3 | 10 | 2 | 3 | 1 | 12 | 19 | 16 | 0 | 1 | 0 | 4 | 0 | 4 |
Nuclear Periphery | 1 | 1 | 0 | 0 | 0 | 0 | 0 | – | 2 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 |
Nucleolus | 1 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 5 | 5 | 11 |
Vac/Vac Membrane | 0 | 0 | 2 | 1 | 7 | 18 | 29 | – | 44 | 47 | 30 | 43 | 2 | 2 | 11 | 21 | 13 | 37 | 4 | 2 | 0 | 2 | 1 | 6 |
Unique Cell Count | 121 | 219 | 208 | 152 | 240 | 201 | 222 | 214 | 292 | 150 | 214 | 436 | 595 | 710 | 618 | 408 | 470 | 142 | 236 | 207 | 381 | 546 | 791 | |
Labelled Cell Count | 124 | 225 | 213 | 155 | 241 | 212 | 234 | 238 | 326 | 171 | 252 | 438 | 600 | 721 | 664 | 445 | 512 | 142 | 236 | 207 | 381 | 546 | 791 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.0 | 5.1 | 6.8 | 6.1 | 7.4 | 7.3 | 7.3 | – | 7.8 | 7.6 | 7.2 | 7.8 | 6.9 | 7.3 | 7.2 | 9.8 | 12.2 | 13.2 | 7.4 | 8.0 | 8.0 |
Std Deviation (1e-4) | 0.8 | 1.5 | 1.2 | 0.9 | 1.4 | 1.7 | 1.5 | – | 2.3 | 2.0 | 2.3 | 2.5 | 1.3 | 1.3 | 1.3 | 2.1 | 2.2 | 2.5 | 2.0 | 2.3 | 2.3 |
Intensity Change (Log2) | – | – | – | -0.17 | 0.13 | 0.1 | 0.1 | – | 0.21 | 0.16 | 0.09 | 0.19 | 0.03 | 0.1 | 0.08 | 0.53 | 0.84 | 0.96 | 0.13 | 0.24 | 0.23 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2.1 | -0.5 | -3.2 | -5.4 | – | -7.8 | -7.7 | -8.7 | -8.7 | 1.3 | 1.9 | 2.3 | -1.1 | -1.3 | -2.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.2 | 1.7 | 1.7 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 4.1 | – | 6.1 | 6.2 | 7.4 | 7.9 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 3.2 | 0 | 2.7 | 0 | 0 | 0 | 0 | 2.8 | 2.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 3.7 | 4.8 | – | 6.5 | 5.6 | 6.2 | 6.4 | 0 | 0 | 0 | 1.8 | 1.7 | 3.6 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.1788 | 2.3015 | 2.041 | 1.9573 | 2.5564 | 2.1829 | 5.3604 | 5.5845 | 5.3931 | 4.6624 | 5.1323 | 5.2056 | 3.1643 | 3.2048 | 3.0946 | 2.9889 | 2.6353 | 3.2057 |
Actin | 0.0248 | 0.0008 | 0.0184 | 0.0006 | 0.0426 | 0.0009 | 0.0466 | 0.0025 | 0.0056 | 0.0011 | 0.0409 | 0.0091 | 0.0651 | 0.0105 | 0.0044 | 0.0176 | 0.0059 | 0.0051 |
Bud | 0.0003 | 0.0021 | 0.0002 | 0.0002 | 0.0023 | 0.0001 | 0.001 | 0.0005 | 0.0006 | 0.0005 | 0.0011 | 0.0004 | 0.0005 | 0.0014 | 0.0004 | 0.0004 | 0.0013 | 0.0001 |
Bud Neck | 0.005 | 0.0003 | 0.0005 | 0.0003 | 0.0121 | 0.0007 | 0.0054 | 0.0002 | 0.0028 | 0.0008 | 0.0013 | 0.0013 | 0.0083 | 0.0005 | 0.003 | 0.0008 | 0.0023 | 0.0013 |
Bud Periphery | 0.0004 | 0.0015 | 0.0002 | 0.0001 | 0.0039 | 0.0001 | 0.0024 | 0.0002 | 0.0004 | 0.0004 | 0.0015 | 0.0003 | 0.0006 | 0.001 | 0.0004 | 0.0003 | 0.0014 | 0.0001 |
Bud Site | 0.0015 | 0.0047 | 0.0005 | 0.0002 | 0.0095 | 0.0001 | 0.0029 | 0.0021 | 0.004 | 0.0002 | 0.0005 | 0.0004 | 0.0014 | 0.0121 | 0.0018 | 0.0005 | 0.0074 | 0.0001 |
Cell Periphery | 0.0003 | 0.0002 | 0.0001 | 0 | 0.0007 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0002 | 0 |
Cytoplasm | 0.6894 | 0.7571 | 0.8026 | 0.7494 | 0.8558 | 0.8634 | 0.5228 | 0.7581 | 0.7392 | 0.7219 | 0.6672 | 0.7738 | 0.7042 | 0.746 | 0.8242 | 0.7853 | 0.7982 | 0.8627 |
Cytoplasmic Foci | 0.0264 | 0.006 | 0.0093 | 0.0196 | 0.0139 | 0.0089 | 0.0217 | 0.0075 | 0.0134 | 0.0069 | 0.0119 | 0.0129 | 0.0146 | 0.0067 | 0.0065 | 0.0112 | 0.0119 | 0.005 |
Eisosomes | 0.0003 | 0.0001 | 0.0002 | 0 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0054 | 0.004 | 0.0047 | 0.0048 | 0.0042 | 0.0029 | 0.0069 | 0.0027 | 0.0023 | 0.0028 | 0.0027 | 0.0021 | 0.003 | 0.0033 | 0.0036 | 0.0049 | 0.003 | 0.0023 |
Endosome | 0.0149 | 0.0042 | 0.0079 | 0.0057 | 0.0109 | 0.0048 | 0.0199 | 0.0033 | 0.0051 | 0.0021 | 0.0129 | 0.0071 | 0.0207 | 0.0024 | 0.002 | 0.0135 | 0.0141 | 0.0025 |
Golgi | 0.0048 | 0.0003 | 0.0016 | 0.0009 | 0.0028 | 0.0002 | 0.0085 | 0.0004 | 0.0042 | 0.0002 | 0.0057 | 0.0012 | 0.005 | 0.0011 | 0.0003 | 0.0018 | 0.0023 | 0.001 |
Lipid Particles | 0.0032 | 0.0003 | 0.0015 | 0.0118 | 0.0003 | 0.0001 | 0.0057 | 0.0002 | 0.0017 | 0.0001 | 0.0164 | 0.0022 | 0.008 | 0.001 | 0.0001 | 0.0009 | 0.0008 | 0.0004 |
Mitochondria | 0.001 | 0.0004 | 0.0013 | 0.0005 | 0.0022 | 0.0003 | 0.002 | 0.0002 | 0.0015 | 0.0003 | 0.0047 | 0.0031 | 0.0019 | 0.0005 | 0.0003 | 0.0014 | 0.0014 | 0.0003 |
None | 0.1843 | 0.2055 | 0.1303 | 0.1533 | 0.0254 | 0.0977 | 0.2869 | 0.2133 | 0.1942 | 0.2566 | 0.1715 | 0.1704 | 0.1215 | 0.1938 | 0.1385 | 0.1351 | 0.1219 | 0.1064 |
Nuclear Periphery | 0.0048 | 0.0023 | 0.0032 | 0.0031 | 0.0043 | 0.0084 | 0.0124 | 0.0015 | 0.0037 | 0.0012 | 0.0104 | 0.0011 | 0.0104 | 0.0014 | 0.0022 | 0.0097 | 0.0031 | 0.0019 |
Nucleolus | 0.0013 | 0.0002 | 0.0002 | 0.0002 | 0.0004 | 0.0001 | 0.0013 | 0.0001 | 0.0005 | 0.0001 | 0.0012 | 0.0001 | 0.0008 | 0.0004 | 0.0002 | 0.0003 | 0.0015 | 0.0001 |
Nucleus | 0.0136 | 0.0063 | 0.0119 | 0.0068 | 0.0044 | 0.0086 | 0.0343 | 0.0033 | 0.0061 | 0.0029 | 0.0058 | 0.0051 | 0.0158 | 0.0113 | 0.0079 | 0.0072 | 0.0129 | 0.009 |
Peroxisomes | 0.0055 | 0.0001 | 0.0012 | 0.0371 | 0.0011 | 0.0001 | 0.0034 | 0.0006 | 0.0105 | 0.0002 | 0.0195 | 0.0066 | 0.0068 | 0.0008 | 0.0003 | 0.0012 | 0.001 | 0.0001 |
Punctate Nuclear | 0.0105 | 0.0015 | 0.0019 | 0.0033 | 0.001 | 0.001 | 0.0133 | 0.0023 | 0.0025 | 0.001 | 0.0228 | 0.0014 | 0.0077 | 0.0035 | 0.0026 | 0.0059 | 0.0051 | 0.001 |
Vacuole | 0.0018 | 0.0019 | 0.0017 | 0.0018 | 0.0013 | 0.0013 | 0.0016 | 0.0008 | 0.0013 | 0.0007 | 0.0009 | 0.0011 | 0.0022 | 0.0016 | 0.0009 | 0.0012 | 0.0037 | 0.0003 |
Vacuole Periphery | 0.0005 | 0.0003 | 0.0004 | 0.0003 | 0.0004 | 0.0003 | 0.0006 | 0.0001 | 0.0002 | 0.0001 | 0.0009 | 0.0002 | 0.0009 | 0.0002 | 0.0001 | 0.0006 | 0.0006 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 39.0092 | 32.381 | 35.118 | 30.9785 | 44.255 | 40.3801 | 34.3145 | 31.4466 | 47.47 | 35.1827 |
Translational Efficiency | 0.9902 | 0.9461 | 1.0446 | 1.8543 | 1.1821 | 1.241 | 0.9885 | 1.5864 | 1.1878 | 1.2103 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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