Standard name | |
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Human Ortholog | |
Description | Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; essential for the integrity and function of EGO; gene exhibits synthetic genetic interaction with MSS4 |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 2 | 1 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 3 | 0 | 0 | 0 | – | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 1 | 0 | 1 | 0 | 1 | – | 4 | 3 | 3 | 12 | 11 | 0 | 0 | 2 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 22 | 24 | 1 | 4 | 8 | 20 | – | 37 | 22 | 16 | 38 | 37 | 2 | 12 | 5 | 12 | 12 | 3 | 3 | 1 | 0 | 0 | 1 | 0 |
Endoplasmic Reticulum | 0 | 1 | 0 | 0 | 1 | 11 | – | 8 | 12 | 10 | 18 | 18 | 1 | 2 | 3 | 10 | 8 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 9 | 8 | 0 | 0 | 1 | 2 | – | 1 | 0 | 0 | 0 | 0 | 4 | 9 | 8 | 4 | 3 | 2 | 27 | 30 | 6 | 10 | 21 | 28 |
Golgi | 7 | 16 | 3 | 0 | 6 | 3 | – | 2 | 1 | 1 | 4 | 0 | 1 | 3 | 0 | 10 | 13 | 7 | 3 | 2 | 0 | 0 | 2 | 1 |
Mitochondria | 12 | 12 | 24 | 13 | 35 | 58 | – | 88 | 61 | 50 | 69 | 59 | 4 | 2 | 4 | 3 | 6 | 3 | 5 | 5 | 2 | 3 | 4 | 2 |
Nucleus | 25 | 21 | 4 | 0 | 2 | 1 | – | 2 | 1 | 2 | 0 | 0 | 2 | 2 | 1 | 4 | 2 | 0 | 30 | 9 | 2 | 2 | 5 | 6 |
Nuclear Periphery | 19 | 24 | 12 | 7 | 7 | 24 | – | 12 | 13 | 6 | 7 | 17 | 19 | 33 | 29 | 20 | 19 | 12 | 11 | 12 | 6 | 5 | 13 | 5 |
Nucleolus | 31 | 29 | 10 | 1 | 2 | 4 | – | 0 | 0 | 2 | 0 | 0 | 11 | 10 | 12 | 13 | 6 | 7 | 8 | 9 | 0 | 6 | 4 | 8 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 2 | 2 | 0 | 1 | 2 | 0 | 0 | 1 | 4 |
Vac/Vac Membrane | 394 | 391 | 50 | 28 | 81 | 76 | – | 87 | 45 | 32 | 29 | 30 | 110 | 159 | 170 | 135 | 102 | 63 | 383 | 409 | 58 | 101 | 99 | 94 |
Unique Cell Count | 456 | 459 | 69 | 40 | 113 | 148 | 194 | 117 | 96 | 134 | 133 | 127 | 185 | 193 | 159 | 127 | 71 | 484 | 489 | 81 | 135 | 158 | 155 | |
Labelled Cell Count | 520 | 527 | 108 | 54 | 143 | 200 | 241 | 161 | 123 | 181 | 173 | 156 | 234 | 234 | 219 | 173 | 101 | 484 | 489 | 81 | 135 | 158 | 155 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 13.3 | 15.9 | 8.0 | 9.9 | 10.4 | 9.3 | – | 8.8 | 8.2 | 8.1 | 8.0 | 7.9 | 12.6 | 13.3 | 13.7 | 17.8 | 17.0 | 17.0 | 14.2 | 14.4 | 14.4 |
Std Deviation (1e-4) | 3.3 | 3.6 | 2.3 | 1.8 | 2.7 | 2.4 | – | 2.1 | 1.9 | 1.9 | 1.9 | 1.6 | 3.2 | 3.2 | 3.2 | 4.8 | 4.7 | 4.6 | 4.6 | 4.4 | 4.2 |
Intensity Change (Log2) | – | – | – | 0.3 | 0.37 | 0.21 | – | 0.13 | 0.03 | 0.02 | -0.0 | -0.02 | 0.65 | 0.73 | 0.76 | 1.15 | 1.08 | 1.08 | 0.82 | 0.84 | 0.84 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 2.8 | – | 3.6 | 3.5 | 3.2 | 4.6 | 4.5 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 3.2 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.4 | 0 |
Mitochondria | -0.2 | -0.5 | 0.6 | – | 1.5 | 2.3 | 2.2 | 2.3 | 1.3 | -6.0 | -7.9 | -7.5 | -7.1 | -5.6 | -4.6 |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | -2.4 | -0.2 | – | -2.8 | -1.2 | -2.3 | -2.8 | -0.9 | -0.4 | 0.1 | -0.5 | -1.0 | -0.4 | -0.1 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | -3.0 | 0 | 0 | -1.3 | -2.4 | -2.1 | -1.5 | -2.4 | -0.8 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -0.3 | -0.1 | -2.9 | – | -3.9 | -4.5 | -5.0 | -7.0 | -6.9 | 2.4 | 2.5 | 3.0 | 2.2 | 1.3 | 2.4 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 9.7264 | 12.4438 | 10.0168 | 10.0374 | 9.9696 | 11.3878 | 8.1441 | 11.1474 | 10.0228 | 8.9603 | 8.4745 | 10.0778 | 9.7222 | 10.9078 | 9.8643 | 8.9156 | 9.6331 | 9.5494 |
Actin | 0.0202 | 0 | 0.0211 | 0.0166 | 0.0095 | 0 | 0.0207 | 0 | 0.0048 | 0.0026 | 0.0027 | 0 | 0.0004 | 0.0008 | 0.0002 | 0.0001 | 0 | 0.0014 |
Bud | 0.0008 | 0.0002 | 0.0014 | 0.0001 | 0.0003 | 0.0007 | 0.0005 | 0.0004 | 0.0009 | 0.0003 | 0.0017 | 0.0002 | 0.0013 | 0.0018 | 0.0018 | 0.0021 | 0.0006 | 0.0014 |
Bud Neck | 0.0005 | 0.0003 | 0.0004 | 0.0001 | 0.0008 | 0.0004 | 0.0012 | 0.0002 | 0.0005 | 0.0001 | 0.0011 | 0.0004 | 0.0007 | 0.0004 | 0.0008 | 0.0005 | 0.0005 | 0.0013 |
Bud Periphery | 0.0012 | 0.0002 | 0.0011 | 0.0001 | 0.0004 | 0.0005 | 0.0009 | 0.0003 | 0.0012 | 0.0003 | 0.0013 | 0.0002 | 0.0006 | 0.0006 | 0.0008 | 0.0006 | 0.0006 | 0.0006 |
Bud Site | 0.0009 | 0.0003 | 0.0016 | 0.0003 | 0.0008 | 0.0001 | 0.002 | 0.0006 | 0.0019 | 0.0005 | 0.0035 | 0.0002 | 0.0019 | 0.0038 | 0.0017 | 0.0005 | 0.0002 | 0.0006 |
Cell Periphery | 0.0008 | 0.0006 | 0.0004 | 0.0002 | 0.0004 | 0.0004 | 0.0009 | 0.0004 | 0.0007 | 0.0001 | 0.0007 | 0.0002 | 0.0004 | 0.0003 | 0.0004 | 0.0002 | 0.0002 | 0.0001 |
Cytoplasm | 0.0153 | 0.0759 | 0.1156 | 0.1172 | 0.0262 | 0.0787 | 0.0382 | 0.0535 | 0.0616 | 0.0035 | 0.016 | 0.0446 | 0.2517 | 0.3293 | 0.3763 | 0.1145 | 0.1598 | 0.3046 |
Cytoplasmic Foci | 0.0045 | 0.0057 | 0.0117 | 0.0097 | 0.0089 | 0.007 | 0.0108 | 0.0022 | 0.0037 | 0.0163 | 0.0066 | 0.0055 | 0.0084 | 0.0105 | 0.0147 | 0.0129 | 0.0034 | 0.0163 |
Eisosomes | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0007 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0016 | 0.0017 | 0.0029 | 0.0004 | 0.0012 | 0.001 | 0.0055 | 0.0016 | 0.0024 | 0.0009 | 0.0034 | 0.0016 | 0.003 | 0.0073 | 0.0037 | 0.0017 | 0.0085 | 0.0052 |
Endosome | 0.0478 | 0.0293 | 0.0509 | 0.0421 | 0.0483 | 0.0292 | 0.0784 | 0.0328 | 0.0547 | 0.0864 | 0.0582 | 0.0573 | 0.0721 | 0.0492 | 0.0954 | 0.1353 | 0.0994 | 0.0929 |
Golgi | 0.0057 | 0.0011 | 0.0062 | 0.0018 | 0.0064 | 0.0003 | 0.0062 | 0.0006 | 0.0032 | 0.0055 | 0.0024 | 0.0008 | 0.0008 | 0.0019 | 0.0014 | 0.0007 | 0.0004 | 0.001 |
Lipid Particles | 0.0087 | 0.0078 | 0.0066 | 0.013 | 0.0196 | 0.0002 | 0.0113 | 0.0004 | 0.005 | 0.0206 | 0.009 | 0.0002 | 0.0005 | 0.0015 | 0.0017 | 0.0002 | 0.0001 | 0.0014 |
Mitochondria | 0.0155 | 0.0006 | 0.0152 | 0.0026 | 0.0098 | 0.0004 | 0.0147 | 0.0011 | 0.0121 | 0.0021 | 0.009 | 0.0006 | 0.0006 | 0.0017 | 0.001 | 0.0002 | 0.0003 | 0.0011 |
None | 0.0008 | 0.0001 | 0.0009 | 0.0002 | 0.0004 | 0.0011 | 0.0026 | 0.0001 | 0.0008 | 0.0005 | 0.0012 | 0.0001 | 0.0008 | 0.0006 | 0.0008 | 0.0007 | 0.0002 | 0.0011 |
Nuclear Periphery | 0.021 | 0.0103 | 0.0196 | 0.0077 | 0.0113 | 0.015 | 0.0267 | 0.0178 | 0.0131 | 0.0014 | 0.009 | 0.0188 | 0.0326 | 0.027 | 0.0103 | 0.0069 | 0.018 | 0.0257 |
Nucleolus | 0.0048 | 0.0076 | 0.0004 | 0.0002 | 0.0015 | 0.0116 | 0.0053 | 0.0005 | 0.0008 | 0.0002 | 0.0007 | 0.0004 | 0.0007 | 0.0005 | 0.0025 | 0.0002 | 0.0003 | 0.0009 |
Nucleus | 0.0159 | 0.0055 | 0.0065 | 0.0015 | 0.0025 | 0.0075 | 0.011 | 0.0046 | 0.0055 | 0.0006 | 0.0037 | 0.0035 | 0.0463 | 0.0176 | 0.0157 | 0.0044 | 0.0215 | 0.0342 |
Peroxisomes | 0.0017 | 0.0002 | 0.0083 | 0.048 | 0.011 | 0.0001 | 0.0045 | 0 | 0.0004 | 0.0241 | 0.0064 | 0.0002 | 0.0002 | 0.0008 | 0.0002 | 0.0002 | 0 | 0.0021 |
Punctate Nuclear | 0.0056 | 0.0001 | 0.0007 | 0.0006 | 0.0006 | 0.0059 | 0.0056 | 0 | 0.0006 | 0.001 | 0.0038 | 0.0001 | 0.0005 | 0.0005 | 0.0005 | 0.0002 | 0.0001 | 0.0012 |
Vacuole | 0.3614 | 0.3474 | 0.3259 | 0.3416 | 0.3343 | 0.3085 | 0.3936 | 0.4077 | 0.4371 | 0.38 | 0.3624 | 0.3299 | 0.4112 | 0.3697 | 0.336 | 0.5653 | 0.5072 | 0.3614 |
Vacuole Periphery | 0.4653 | 0.5053 | 0.4025 | 0.3959 | 0.5057 | 0.5312 | 0.3587 | 0.4752 | 0.3891 | 0.453 | 0.497 | 0.5352 | 0.1654 | 0.1745 | 0.1341 | 0.1527 | 0.179 | 0.1455 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 23.6927 | 24.2056 | 25.4455 | 32.841 | 17.5535 | 31.5728 | 38.7508 | 30.9721 | 33.7714 | 38.7484 |
Translational Efficiency | 1.4359 | 1.9692 | 1.2802 | 1.6774 | 2.7132 | 1.3759 | 1.4701 | 1.8325 | 1.7531 | 1.8243 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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