Standard name | |
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Human Ortholog | |
Description | Ribosomal stalk protein P1 alpha; involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 1 | 0 | 0 | 0 | – | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 0 | 0 | 2 | 0 | – | 7 | 10 | 8 | 3 | 6 | 0 | 0 | 2 | 0 | 5 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
Cytoplasm | 124 | 66 | 72 | 170 | 153 | 135 | – | 212 | 130 | 141 | 115 | 122 | 118 | 177 | 173 | 35 | 63 | 23 | 129 | 86 | 60 | 52 | 118 | 137 |
Endoplasmic Reticulum | 1 | 0 | 0 | 0 | 2 | 3 | – | 12 | 6 | 23 | 10 | 14 | 0 | 2 | 0 | 1 | 7 | 1 | 0 | 0 | 1 | 0 | 1 | 3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 1 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 1 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 1 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 1 | 1 | 0 | – | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 1 | 1 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 |
Unique Cell Count | 125 | 67 | 76 | 172 | 159 | 138 | 229 | 145 | 169 | 128 | 146 | 118 | 182 | 174 | 35 | 66 | 23 | 135 | 92 | 72 | 56 | 125 | 146 | |
Labelled Cell Count | 126 | 67 | 76 | 172 | 161 | 138 | 235 | 151 | 172 | 130 | 146 | 118 | 183 | 175 | 38 | 76 | 24 | 135 | 92 | 72 | 56 | 125 | 146 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 294.8 | 311.4 | 188.4 | 272.8 | 237.9 | 191.8 | – | 153.5 | 133.7 | 128.4 | 111.2 | 109.1 | 306.0 | 300.3 | 287.5 | 318.8 | 302.9 | 292.7 | 294.2 | 339.1 | 336.0 |
Std Deviation (1e-4) | 59.5 | 103.5 | 79.6 | 72.6 | 76.3 | 59.2 | – | 42.5 | 35.1 | 33.2 | 31.6 | 32.5 | 67.1 | 73.4 | 56.7 | 126.2 | 109.0 | 106.1 | 82.2 | 85.3 | 85.0 |
Intensity Change (Log2) | – | – | – | 0.53 | 0.34 | 0.03 | – | -0.3 | -0.5 | -0.55 | -0.76 | -0.79 | 0.7 | 0.67 | 0.61 | 0.76 | 0.68 | 0.64 | 0.64 | 0.85 | 0.83 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.9 | 0.5 | 1.2 | – | -0.6 | -1.3 | -2.4 | -1.2 | -2.4 | 2.5 | 1.0 | 2.4 | 1.4 | 0.2 | 1.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 3.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 221.8363 | 341.0973 | 298.6163 | 234.3487 | 224.3048 | 213.1921 | 198.6183 | 343.4382 | 281.3251 | 281.6279 | 266.4788 | 310.0589 | 263.0425 | 414.4092 | 359.8285 | 366.6771 | 308.5747 | 394.2698 |
Actin | 0.013 | 0.0015 | 0.0039 | 0.0691 | 0.0084 | 0.0239 | 0.0278 | 0.0007 | 0.0084 | 0.001 | 0.0104 | 0.0035 | 0.0398 | 0.0006 | 0.0051 | 0.0006 | 0.011 | 0.0111 |
Bud | 0.0044 | 0.0049 | 0.0083 | 0.0044 | 0.006 | 0.0173 | 0.0044 | 0.0029 | 0.0051 | 0.0059 | 0.0114 | 0.0052 | 0.0059 | 0.0032 | 0.0038 | 0.0038 | 0.0074 | 0.0051 |
Bud Neck | 0.0011 | 0.0011 | 0.0028 | 0.0012 | 0.0016 | 0.0026 | 0.0019 | 0.0006 | 0.0011 | 0.0018 | 0.0023 | 0.0015 | 0.0024 | 0.0006 | 0.0012 | 0.0016 | 0.001 | 0.0019 |
Bud Periphery | 0.0044 | 0.0025 | 0.0057 | 0.003 | 0.0082 | 0.0103 | 0.0056 | 0.001 | 0.003 | 0.0027 | 0.0103 | 0.0023 | 0.0046 | 0.0011 | 0.0015 | 0.0011 | 0.0026 | 0.0036 |
Bud Site | 0.0014 | 0.0031 | 0.0127 | 0.0068 | 0.002 | 0.0044 | 0.006 | 0.0019 | 0.003 | 0.0019 | 0.0013 | 0.0012 | 0.011 | 0.0022 | 0.0022 | 0.0004 | 0.001 | 0.0012 |
Cell Periphery | 0.0532 | 0.0247 | 0.0501 | 0.0304 | 0.007 | 0.007 | 0.0344 | 0.0188 | 0.0498 | 0.0562 | 0.0075 | 0.0313 | 0.0582 | 0.0234 | 0.0206 | 0.0092 | 0.0058 | 0.0038 |
Cytoplasm | 0.4262 | 0.7685 | 0.613 | 0.3524 | 0.3248 | 0.3932 | 0.4399 | 0.8478 | 0.5694 | 0.5163 | 0.456 | 0.5817 | 0.5004 | 0.8394 | 0.7859 | 0.6286 | 0.6098 | 0.6272 |
Cytoplasmic Foci | 0.0424 | 0.0025 | 0.0033 | 0.0078 | 0.0558 | 0.0789 | 0.0034 | 0.0013 | 0.0143 | 0.0027 | 0.0063 | 0.0075 | 0.004 | 0.0008 | 0.0029 | 0.0012 | 0.0118 | 0.0069 |
Eisosomes | 0.0036 | 0.0002 | 0.0004 | 0.0079 | 0.0007 | 0.0016 | 0.0248 | 0.0004 | 0.0049 | 0.0008 | 0.0001 | 0.0004 | 0.0093 | 0.0001 | 0.0075 | 0 | 0.0018 | 0.0006 |
Endoplasmic Reticulum | 0.0199 | 0.0024 | 0.0049 | 0.0058 | 0.0372 | 0.0063 | 0.024 | 0.0017 | 0.0029 | 0.0018 | 0.0081 | 0.0035 | 0.006 | 0.0022 | 0.0012 | 0.0003 | 0.004 | 0.0088 |
Endosome | 0.0094 | 0.002 | 0.0053 | 0.0142 | 0.0787 | 0.0739 | 0.014 | 0.0018 | 0.0058 | 0.0057 | 0.0321 | 0.0073 | 0.004 | 0.0009 | 0.0025 | 0.0021 | 0.0088 | 0.004 |
Golgi | 0.0037 | 0.0004 | 0.0017 | 0.0169 | 0.0442 | 0.0157 | 0.0029 | 0.0003 | 0.0027 | 0.0003 | 0.0058 | 0.0013 | 0.002 | 0.0001 | 0.0014 | 0.0001 | 0.0039 | 0.0011 |
Lipid Particles | 0.0104 | 0.0009 | 0.0028 | 0.0059 | 0.0114 | 0.015 | 0.004 | 0.0008 | 0.0059 | 0.0026 | 0.0014 | 0.0025 | 0.0046 | 0.0005 | 0.0026 | 0.0006 | 0.0057 | 0.0016 |
Mitochondria | 0.0802 | 0.0149 | 0.0184 | 0.0943 | 0.0272 | 0.0675 | 0.0676 | 0.0079 | 0.0601 | 0.0091 | 0.0801 | 0.1376 | 0.0793 | 0.0027 | 0.0188 | 0.0019 | 0.0868 | 0.1322 |
None | 0.0094 | 0.0018 | 0.0025 | 0.0088 | 0.0098 | 0.0455 | 0.0087 | 0.0012 | 0.0077 | 0.0022 | 0.0037 | 0.0042 | 0.0088 | 0.0014 | 0.0033 | 0.001 | 0.0128 | 0.0084 |
Nuclear Periphery | 0.0468 | 0.0061 | 0.0154 | 0.0205 | 0.0277 | 0.0301 | 0.0706 | 0.0063 | 0.0068 | 0.0127 | 0.0254 | 0.0322 | 0.0662 | 0.008 | 0.0089 | 0.0128 | 0.0123 | 0.0327 |
Nucleolus | 0.0314 | 0.0092 | 0.0189 | 0.0703 | 0.0093 | 0.0114 | 0.0142 | 0.0024 | 0.0146 | 0.0278 | 0.002 | 0.0208 | 0.0492 | 0.0021 | 0.0085 | 0.0055 | 0.0071 | 0.0096 |
Nucleus | 0.0502 | 0.0238 | 0.0303 | 0.0377 | 0.0261 | 0.0279 | 0.0386 | 0.0136 | 0.0171 | 0.03 | 0.015 | 0.0406 | 0.0459 | 0.0172 | 0.0203 | 0.057 | 0.0259 | 0.0293 |
Peroxisomes | 0.0099 | 0.0005 | 0.0009 | 0.0047 | 0.0061 | 0.0032 | 0.0013 | 0.0003 | 0.0015 | 0.0008 | 0.0007 | 0.0022 | 0.0016 | 0.0002 | 0.0005 | 0.0002 | 0.0011 | 0.0014 |
Punctate Nuclear | 0.0014 | 0.0001 | 0.0002 | 0.0004 | 0.0013 | 0.0024 | 0.002 | 0.0001 | 0.0006 | 0.0001 | 0.002 | 0.0005 | 0.0009 | 0.0001 | 0.0002 | 0.0001 | 0.0011 | 0.0007 |
Vacuole | 0.124 | 0.0982 | 0.1449 | 0.1495 | 0.1737 | 0.0595 | 0.1273 | 0.0705 | 0.1547 | 0.2496 | 0.1722 | 0.0534 | 0.0575 | 0.077 | 0.0765 | 0.1694 | 0.0883 | 0.059 |
Vacuole Periphery | 0.0536 | 0.0307 | 0.0535 | 0.0879 | 0.1329 | 0.1024 | 0.0764 | 0.0176 | 0.0604 | 0.0679 | 0.1457 | 0.0591 | 0.0387 | 0.0162 | 0.0247 | 0.1024 | 0.09 | 0.0498 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3229.4345 | 3917.8493 | 5191.9408 | 2420.0662 | 3638.9245 | 4624.175 | 2846.7229 | 2401.0273 | 3508.7395 | 1984.2905 |
Translational Efficiency | 1.3409 | 1.2719 | 1.0769 | 3.5519 | 1.7141 | 0.8789 | 1.4058 | 2.7938 | 1.3226 | 1.9647 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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