Standard name | |
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Human Ortholog | |
Description | Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays elevated frequency of mitochondrial genome loss |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 0 | 3 | 1 | 1 | 1 | 7 | 1 | 1 | 1 | 1 | – | 2 | 2 | – | – | – | 0 | 5 | 1 | 0 | 6 | 2 |
Bud | 1 | 1 | 2 | 1 | 1 | 3 | 5 | 6 | 12 | 7 | 11 | 5 | – | 0 | 0 | – | – | – | 0 | 1 | 0 | 0 | 1 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – | 0 | 1 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | – | 0 | 0 | – | – | – | – | – | – | – | – | – |
Cell Periphery | 1 | 12 | 4 | 8 | 5 | 4 | 4 | 6 | 2 | 8 | 3 | 8 | – | 1 | 7 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1 | 3 | 1 | 0 | 5 | 4 | 7 | 3 | 2 | 4 | 4 | 6 | – | 8 | 6 | – | – | – | 0 | 0 | 0 | 1 | 0 | 1 |
Endoplasmic Reticulum | 0 | 0 | 1 | 0 | 1 | 1 | 4 | 2 | 1 | 2 | 0 | 5 | – | 1 | 2 | – | – | – | 0 | 1 | 0 | 0 | 0 | 0 |
Endosome | 0 | 8 | 2 | 8 | 13 | 17 | 23 | 16 | 7 | 11 | 0 | 7 | – | 5 | 3 | – | – | – | 2 | 15 | 6 | 1 | 1 | 2 |
Golgi | 0 | 34 | 22 | 43 | 65 | 18 | 15 | 25 | 9 | 19 | 2 | 13 | – | 54 | 65 | – | – | – | 3 | 21 | 3 | 0 | 13 | 16 |
Mitochondria | 105 | 234 | 60 | 144 | 167 | 230 | 324 | 348 | 252 | 345 | 338 | 404 | – | 95 | 100 | – | – | – | 96 | 235 | 91 | 27 | 76 | 99 |
Nucleus | 1 | 1 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 2 | 0 | 0 | – | 0 | 0 | – | – | – | 0 | 0 | 0 | 1 | 0 | 0 |
Nuclear Periphery | 8 | 6 | 0 | 3 | 10 | 29 | 53 | 51 | 32 | 38 | 27 | 41 | – | 2 | 4 | – | – | – | 0 | 2 | 0 | 0 | 1 | 0 |
Nucleolus | 11 | 7 | 1 | 5 | 11 | 21 | 53 | 42 | 37 | 29 | 23 | 25 | – | 2 | 1 | – | – | – | 0 | 1 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 7 | 4 | 8 | 7 | 8 | 8 | 8 | 12 | 3 | 0 | 2 | – | 2 | 1 | – | – | – | 3 | 6 | 6 | 1 | 4 | 4 |
SpindlePole | 0 | 0 | 2 | 5 | 2 | 5 | 4 | 7 | 8 | 7 | 1 | 8 | – | 1 | 1 | – | – | – | 0 | 2 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 11 | 58 | 23 | 14 | 40 | 25 | 22 | 18 | 20 | 32 | 14 | 13 | – | 18 | 14 | – | – | – | 1 | 17 | 4 | 0 | 1 | 8 |
Unique Cell Count | 113 | 279 | 81 | 167 | 240 | 297 | 425 | 436 | 308 | 406 | 352 | 444 | 130 | 140 | 110 | 314 | 116 | 34 | 109 | 142 | ||||
Labelled Cell Count | 139 | 372 | 122 | 242 | 328 | 367 | 525 | 542 | 399 | 509 | 424 | 538 | 191 | 206 | 110 | 314 | 116 | 34 | 109 | 142 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.0 | 9.0 | 8.8 | 9.2 | 11.2 | 10.5 | 10.3 | 10.1 | 8.9 | 9.3 | 8.2 | 8.9 | – | 10.3 | 10.3 | – | – | – | – | 10.2 | 11.2 |
Std Deviation (1e-4) | 1.4 | 1.8 | 2.1 | 1.9 | 2.1 | 2.8 | 2.7 | 2.3 | 2.5 | 2.2 | 2.3 | 2.5 | – | 1.9 | 2.0 | – | – | – | – | 1.8 | 2.3 |
Intensity Change (Log2) | – | – | – | 0.06 | 0.35 | 0.25 | 0.22 | 0.19 | 0.02 | 0.08 | -0.11 | 0.01 | – | 0.23 | 0.22 | – | – | – | – | 0.21 | 0.34 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Golgi | -0.2 | 0 | -5.5 | -7.5 | -6.2 | -7.2 | -6.7 | 0 | -8.0 | – | 2.1 | 2.8 | – | – | – |
Mitochondria | 2.3 | -0.8 | 0.6 | 0.4 | 1.2 | 1.6 | 2.4 | 6.5 | 4.4 | – | -0.2 | -0.4 | – | – | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Nuclear Periphery | 0 | 0 | 2.9 | 3.4 | 3.2 | 3.0 | 2.9 | 2.6 | 2.8 | – | 0 | 0 | – | – | – |
Nucleolus | 0 | 0 | 0 | 3.0 | 2.5 | 2.9 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – |
Vacuole | -4.1 | -2.3 | -4.8 | -6.7 | -7.4 | -5.6 | -5.3 | -7.1 | -8.3 | – | -2.6 | -3.5 | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.232 | 7.8407 | 7.0653 | 5.7748 | 7.0644 | 7.5114 | 10.6347 | 10.151 | 9.8126 | 9.4347 | 9.0122 | 9.7958 | 6.7382 | 7.9698 | 7.2513 | 6.2413 | 5.8207 | 7.1173 |
Actin | 0.0328 | 0.0012 | 0.014 | 0.0405 | 0.0001 | 0.0013 | 0.001 | 0.0016 | 0.0003 | 0 | 0.0001 | 0.0002 | 0.028 | 0.0012 | 0.0016 | 0.0597 | 0.0193 | 0.0005 |
Bud | 0.0002 | 0.0008 | 0.0003 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0006 | 0.0001 | 0.0003 | 0.0004 | 0.0005 | 0 |
Bud Neck | 0.0028 | 0.0002 | 0.0003 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0004 | 0.0004 | 0.0006 | 0 |
Bud Periphery | 0.0003 | 0.0016 | 0.0007 | 0.0002 | 0 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0011 | 0.0001 | 0.0004 | 0.0004 | 0.0011 | 0.0002 |
Bud Site | 0.0015 | 0.0021 | 0.0018 | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0013 | 0.0002 | 0.0017 | 0.0017 | 0.0007 | 0 |
Cell Periphery | 0.0002 | 0.0008 | 0.0016 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0001 |
Cytoplasm | 0.0015 | 0.0001 | 0.0026 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0022 | 0 | 0.0028 | 0.0084 | 0.0003 | 0 |
Cytoplasmic Foci | 0.028 | 0.0015 | 0.005 | 0.0029 | 0 | 0.0003 | 0.0007 | 0.0009 | 0.0017 | 0 | 0 | 0.0001 | 0.0187 | 0.0009 | 0.0162 | 0.0295 | 0.0105 | 0.0003 |
Eisosomes | 0.0004 | 0.0002 | 0.0017 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0001 |
Endoplasmic Reticulum | 0.0015 | 0.0001 | 0.002 | 0.0002 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0011 | 0 | 0.0001 | 0.0139 | 0.0007 | 0 |
Endosome | 0.0215 | 0.0094 | 0.0083 | 0.0066 | 0.0002 | 0.0026 | 0.0022 | 0.0014 | 0.0024 | 0.0005 | 0.0002 | 0.0009 | 0.0147 | 0.0034 | 0.0048 | 0.0375 | 0.0369 | 0.0015 |
Golgi | 0.0157 | 0.0222 | 0.0114 | 0.0139 | 0.0004 | 0.0052 | 0.0092 | 0.0195 | 0.0049 | 0.0014 | 0.0006 | 0.0045 | 0.0222 | 0.0063 | 0.005 | 0.0127 | 0.0413 | 0.0017 |
Lipid Particles | 0.026 | 0.0128 | 0.0053 | 0.0194 | 0.0001 | 0.0095 | 0.0034 | 0.0004 | 0.0017 | 0 | 0.0005 | 0.0006 | 0.0293 | 0.0131 | 0.0048 | 0.0116 | 0.0138 | 0.006 |
Mitochondria | 0.8239 | 0.9176 | 0.9259 | 0.9091 | 0.9985 | 0.9604 | 0.9723 | 0.969 | 0.9811 | 0.9974 | 0.9969 | 0.9896 | 0.8221 | 0.9552 | 0.9404 | 0.7907 | 0.863 | 0.9736 |
None | 0.0033 | 0.0001 | 0.0016 | 0.0002 | 0 | 0.0005 | 0 | 0 | 0 | 0 | 0 | 0 | 0.024 | 0 | 0.0001 | 0.0019 | 0.0001 | 0 |
Nuclear Periphery | 0.0084 | 0.0001 | 0.0011 | 0.0002 | 0 | 0.007 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0022 | 0 | 0.0002 | 0.0065 | 0.0006 | 0.0002 |
Nucleolus | 0.0009 | 0.0004 | 0.001 | 0.0001 | 0 | 0.0006 | 0.0001 | 0 | 0.0011 | 0 | 0 | 0 | 0.0026 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0001 |
Nucleus | 0.001 | 0.0002 | 0.0006 | 0 | 0 | 0.0015 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0001 | 0.0008 | 0.0002 | 0.0001 |
Peroxisomes | 0.013 | 0.0045 | 0.0059 | 0.003 | 0.0003 | 0.0011 | 0.0066 | 0.0061 | 0.0011 | 0.0001 | 0.0002 | 0.0022 | 0.0147 | 0.0046 | 0.0089 | 0.0158 | 0.003 | 0.0053 |
Punctate Nuclear | 0.0077 | 0 | 0.0033 | 0.0002 | 0 | 0.0026 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0.002 | 0 | 0.0006 | 0.0049 | 0.0005 | 0 |
Vacuole | 0.0029 | 0.012 | 0.002 | 0.0005 | 0.0001 | 0.0008 | 0.0006 | 0.0001 | 0.0017 | 0 | 0.0002 | 0.0001 | 0.0036 | 0.0053 | 0.0048 | 0.0015 | 0.0019 | 0.002 |
Vacuole Periphery | 0.0064 | 0.0119 | 0.0037 | 0.002 | 0.0003 | 0.0056 | 0.0034 | 0.0007 | 0.0029 | 0.0004 | 0.0013 | 0.0015 | 0.008 | 0.0086 | 0.0063 | 0.0011 | 0.0046 | 0.0083 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 56.5173 | 44.5021 | 43.512 | 56.8005 | 51.256 | 43.901 | 49.7603 | 51.2705 | 55.9501 | 55.3619 |
Translational Efficiency | 0.9982 | 1.0304 | 1.1399 | 0.8979 | 0.8808 | 1.1845 | 0.935 | 0.9341 | 1.0125 | 1.0044 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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