Standard name
Human Ortholog
Description Probable mitochondrial seryl-tRNA synthetase; mutant displays increased invasive and pseudohyphal growth
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 – 0 0 – 0 0 0 0 0 0 0 0.05 0 0 – – – 0 0.08 0 0.05 0 0
Bud 0 – 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0
Bud Neck 0 – 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0.05
Bud Site 0 – 0 0 – 0 0 0.08 0 0 0 0 0 0 0 – – – – – – – – –
Cell Periphery 0 – 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0
Cytoplasm 0.42 – 0.25 0.41 – 0.14 0 0 0.15 0.11 0.05 0.08 0.84 0.74 0.58 – – – 0.06 0.23 0 0.17 0.2 0.15
Endoplasmic Reticulum 0 – 0 0.06 – 0.1 0 0 0 0 0 0 0.05 0 0 – – – 0 0 0 0 0 0
Endosome 0 – 0 0 – 0 0 0 0 0 0 0 0 0.13 0.24 – – – 0.09 0.05 0.11 0.08 0.11 0
Golgi 0 – 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0
Mitochondria 0.7 – 0.5 0.71 – 0.9 0.91 0.9 0.91 0.84 0.96 0.9 0 0 0 – – – 0.58 0.49 0.68 0.43 0.39 0.46
Nucleus 0 – 0 0.06 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0
Nuclear Periphery 0 – 0 0.06 – 0 0 0 0 0 0 0 0 0 0 – – – 0 0 0 0 0 0
Nucleolus 0 – 0 0 – 0 0 0 0 0.05 0 0 0 0 0 – – – 0 0 0 0 0 0
Peroxisomes 0 – 0 0 – 0.05 0 0 0 0 0 0 0 0 0.09 – – – 0.05 0 0.06 0 0 0
SpindlePole 0 – 0.19 0.06 – 0.05 0 0.15 0.09 0.11 0 0.12 0 0.05 0 – – – 0.06 0 0 0 0.06 0
Vac/Vac Membrane 0 – 0.06 0 – 0.05 0 0.05 0 0 0 0 0.05 0.11 0.15 – – – 0 0 0 0.15 0.12 0.16
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 – 0 0 – 0 0 0 0 0 0 0 1 0 0 – – – 1 3 1 2 0 1
Bud 2 – 0 0 – 0 1 1 1 1 2 2 0 0 0 – – – 1 0 0 1 1 1
Bud Neck 0 – 0 0 – 0 0 0 1 0 0 1 0 0 1 – – – 0 1 0 0 1 5
Bud Site 0 – 0 0 – 0 0 5 0 1 1 1 0 0 0 – – – – – – – – –
Cell Periphery 0 – 0 0 – 0 0 0 0 0 0 0 0 1 0 – – – 0 0 0 0 0 0
Cytoplasm 22 – 4 7 – 3 1 2 5 4 3 4 16 28 60 – – – 5 9 0 8 18 16
Endoplasmic Reticulum 0 – 0 1 – 2 0 0 0 0 0 0 1 1 1 – – – 1 0 0 0 0 2
Endosome 0 – 0 0 – 0 0 0 0 1 0 0 0 5 25 – – – 8 1 6 4 9 4
Golgi 0 – 0 0 – 0 0 0 0 0 0 0 0 1 1 – – – 2 0 0 0 0 0
Mitochondria 37 – 8 12 – 19 21 56 30 32 54 45 0 0 4 – – – 53 20 42 21 35 50
Nucleus 1 – 0 1 – 0 0 0 1 1 2 1 0 0 0 – – – 0 0 0 0 1 0
Nuclear Periphery 0 – 0 1 – 0 0 0 0 0 0 1 0 0 0 – – – 0 0 0 0 0 0
Nucleolus 0 – 0 0 – 0 0 0 0 2 0 0 0 0 0 – – – 0 0 0 0 0 1
Peroxisomes 0 – 0 0 – 1 0 2 0 0 1 1 0 0 9 – – – 4 0 3 0 0 0
SpindlePole 1 – 3 1 – 1 1 9 3 4 0 6 0 2 4 – – – 5 1 2 0 5 4
Vac/Vac Membrane 0 – 1 0 – 1 1 3 1 1 0 0 1 4 15 – – – 3 1 1 7 10 17
Unique Cell Count 53 16 17 21 23 62 33 38 56 50 19 38 103 93 41 63 49 90 111
Labelled Cell Count 63 16 23 27 25 78 42 47 63 62 19 42 120 93 41 63 49 90 111


Mitochondria, Punctate Nuclear

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.0 – 3.9 3.3 – 3.2 3.4 3.3 3.2 3.6 2.6 2.8 5.3 5.3 5.4 – – – – 5.7 5.7
Std Deviation (1e-4) 0.7 – 0.6 0.6 – 0.6 0.7 1.4 1.2 2.4 0.5 0.7 1.1 1.1 1.3 – – – – 2.4 1.9
Intensity Change (Log2) – – – -0.24 – -0.28 -0.21 -0.23 -0.31 -0.13 -0.59 -0.5 0.44 0.45 0.46 – – – – 0.54 0.55


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud 0 – – – – – – – – 0 0 0 – – –
Bud Neck 0 – – – – – – – – 0 0 0 – – –
Bud Site 0 – – – – – – – – 0 0 0 – – –
Cell Periphery 0 – – – – – – – – 0 0 0 – – –
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum 0 – – – – – – – – 0 0 0 – – –
Endosome 0 – – – – – – – – 0 0 0 – – –
Golgi 0 – – – – – – – – 0 0 0 – – –
Mitochondria 0 – – – – – – – – 0 0 0 – – –
Nuclear Periphery 0 – – – – – – – – 0 0 0 – – –
Nuc – – – – – – – – – – – – – – –
Nucleolus 0 – – – – – – – – 0 0 0 – – –
Peroxisomes 0 – – – – – – – – 0 0 0 – – –
SpindlePole 0 – – – – – – – – 0 0 0 – – –
Vac – – – – – – – – – – – – – – –
Cortical Patches 0 – – – – – – – – 0 0 0 – – –
Cytoplasm 1.0 – – – – – – – – 3.5 3.3 2.5 – – –
Nucleus 0 – – – – – – – – 0 0 0 – – –
Vacuole 0 – – – – – – – – 0 0 0 – – –

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration – – – – – – – – – – – – – – – – – –
Actin – – – – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – – – – – – –
Bud Neck – – – – – – – – – – – – – – – – – –
Bud Periphery – – – – – – – – – – – – – – – – – –
Bud Site – – – – – – – – – – – – – – – – – –
Cell Periphery – – – – – – – – – – – – – – – – – –
Cytoplasm – – – – – – – – – – – – – – – – – –
Cytoplasmic Foci – – – – – – – – – – – – – – – – – –
Eisosomes – – – – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – – – – – – –
Endosome – – – – – – – – – – – – – – – – – –
Golgi – – – – – – – – – – – – – – – – – –
Lipid Particles – – – – – – – – – – – – – – – – – –
Mitochondria – – – – – – – – – – – – – – – – – –
None – – – – – – – – – – – – – – – – – –
Nuclear Periphery – – – – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – – – – – – –
Nucleus – – – – – – – – – – – – – – – – – –
Peroxisomes – – – – – – – – – – – – – – – – – –
Punctate Nuclear – – – – – – – – – – – – – – – – – –
Vacuole – – – – – – – – – – – – – – – – – –
Vacuole Periphery – – – – – – – – – – – – – – – – – –

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 5.7598 1.4711 4.3665 7.9098 3.2005 5.7566 7.4372 7.0274 8.7776 9.3178
Translational Efficiency – – – – – – – – – –

Hit Data

Dataset Hit
Protein Concentration –
Protein Localization –
Gene Expression ✘
Translational Efficiency –

No result is found for the queried gene(s). Please try another query.


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Dia4-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available