Standard name | |
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Human Ortholog | |
Description | F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | – | 0 | 0 | 0 | 0 | – | 0 | 0 | – | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 3 | 5 | 5 |
Bud | 0 | 0 | – | 1 | 0 | 0 | 0 | – | 1 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 2 | 3 |
Bud Neck | 1 | 0 | – | 0 | 0 | 0 | 3 | – | 0 | 3 | – | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 2 | 1 | 4 |
Bud Site | 0 | 0 | – | 0 | 0 | 0 | 0 | – | 1 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | – | 1 | 0 | 0 | 0 | – | 0 | 0 | – | 0 | 1 | 1 | 1 | 2 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 103 | 190 | – | 10 | 60 | 31 | 76 | – | 37 | 48 | – | 33 | 68 | 137 | 193 | 106 | 78 | 94 | 85 | 170 | 22 | 106 | 160 | 183 |
Endoplasmic Reticulum | 1 | 3 | – | 0 | 0 | 0 | 0 | – | 1 | 0 | – | 0 | 0 | 0 | 2 | 15 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 7 | – | 1 | 0 | 0 | 1 | – | 0 | 0 | – | 0 | 2 | 6 | 2 | 2 | 1 | 2 | 0 | 4 | 2 | 3 | 2 | 4 |
Golgi | 0 | 0 | – | 1 | 1 | 0 | 0 | – | 0 | 0 | – | 0 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 34 | 4 | – | 2 | 0 | 9 | 10 | – | 37 | 32 | – | 37 | 1 | 3 | 1 | 10 | 2 | 3 | 13 | 10 | 9 | 4 | 8 | 9 |
Nucleus | 12 | 8 | – | 0 | 2 | 1 | 4 | – | 6 | 5 | – | 3 | 28 | 3 | 3 | 0 | 1 | 1 | 26 | 31 | 5 | 6 | 6 | 7 |
Nuclear Periphery | 0 | 0 | – | 0 | 0 | 0 | 0 | – | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 1 | 0 | – | 0 | 0 | 0 | 0 | – | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | – | 0 | 0 | 1 | 0 | – | 0 | 0 | – | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
SpindlePole | 0 | 0 | – | 0 | 0 | 0 | 0 | – | 1 | 2 | – | 1 | 0 | 2 | 0 | 1 | 0 | 1 | 5 | 6 | 3 | 8 | 8 | 10 |
Vac/Vac Membrane | 22 | 61 | – | 2 | 1 | 0 | 2 | – | 1 | 3 | – | 2 | 13 | 20 | 5 | 7 | 7 | 6 | 31 | 44 | 13 | 11 | 6 | 12 |
Unique Cell Count | 151 | 253 | 16 | 63 | 38 | 89 | 68 | 78 | 60 | 105 | 161 | 204 | 117 | 83 | 100 | 181 | 287 | 67 | 157 | 216 | 252 | |||
Labelled Cell Count | 174 | 273 | 18 | 64 | 42 | 96 | 87 | 93 | 78 | 114 | 173 | 210 | 146 | 96 | 115 | 181 | 287 | 67 | 157 | 216 | 252 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.5 | 4.4 | – | 5.9 | 6.1 | 4.8 | 5.2 | – | 3.8 | 3.7 | – | 4.2 | 5.5 | 5.9 | 5.5 | 6.7 | 6.6 | 7.2 | 4.8 | 5.2 | 5.4 |
Std Deviation (1e-4) | 0.8 | 1.0 | – | 2.0 | 2.7 | 1.8 | 2.3 | – | 1.3 | 1.0 | – | 2.3 | 1.1 | 1.9 | 1.6 | 3.3 | 3.2 | 4.7 | 0.7 | 1.4 | 1.3 |
Intensity Change (Log2) | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasmic Foci | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Eisosomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Lipid Particles | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
None | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Punctate Nuclear | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 20.9435 | 14.3622 | 20.5535 | 24.2286 | 18.2267 | 16.0573 | 23.9866 | 23.8027 | 29.3262 | 23.1233 |
Translational Efficiency | 0.4619 | 0.735 | 0.6052 | 0.5606 | 0.559 | 0.5848 | 0.3872 | 0.4248 | 0.3726 | 0.3785 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | – |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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