Standard name | |
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Human Ortholog | |
Description | Mitochondrial protein, regulator of COB mRNA stability and translation; interacts with the 5'-untranslated region of the COB mRNA; found in a complex at the inner membrane along with Pet309p; localizes to mitochondrial foci upon DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 1 | 2 | 3 | 2 | 2 | 1 | 1 | 2 | 0 | 2 | 1 | 3 | 4 | 4 | 2 | 0 | 0 | 3 | 8 | 6 | 3 | 7 | 15 |
Bud | 6 | 11 | 5 | 14 | 5 | 7 | 20 | 9 | 13 | 21 | 25 | 16 | 2 | 4 | 2 | 7 | 8 | 8 | 1 | 3 | 6 | 1 | 3 | 6 |
Bud Neck | 0 | 2 | 14 | 6 | 9 | 8 | 9 | 6 | 1 | 5 | 0 | 2 | 1 | 3 | 3 | 6 | 12 | 2 | 2 | 2 | 5 | 1 | 5 | 8 |
Bud Site | 4 | 1 | 0 | 1 | 0 | 5 | 2 | 3 | 6 | 3 | 7 | 5 | 1 | 0 | 0 | 3 | 3 | 5 | – | – | – | – | – | – |
Cell Periphery | 0 | 7 | 3 | 2 | 2 | 0 | 2 | 0 | 3 | 3 | 1 | 2 | 2 | 1 | 3 | 6 | 9 | 6 | 0 | 0 | 1 | 0 | 0 | 1 |
Cytoplasm | 33 | 42 | 120 | 81 | 111 | 59 | 74 | 54 | 24 | 40 | 45 | 30 | 62 | 100 | 119 | 84 | 65 | 67 | 7 | 8 | 15 | 12 | 6 | 9 |
Endoplasmic Reticulum | 4 | 2 | 1 | 1 | 2 | 7 | 0 | 2 | 3 | 1 | 1 | 2 | 1 | 5 | 1 | 13 | 7 | 7 | 0 | 1 | 6 | 1 | 1 | 3 |
Endosome | 8 | 63 | 12 | 27 | 21 | 7 | 22 | 12 | 7 | 14 | 1 | 1 | 39 | 44 | 41 | 32 | 49 | 51 | 33 | 54 | 54 | 16 | 29 | 52 |
Golgi | 1 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 5 | 1 | 2 | 6 | 5 | 1 | 3 | 6 |
Mitochondria | 124 | 68 | 6 | 78 | 64 | 179 | 219 | 161 | 230 | 313 | 404 | 351 | 15 | 11 | 3 | 29 | 14 | 15 | 128 | 182 | 165 | 132 | 152 | 270 |
Nucleus | 2 | 1 | 1 | 0 | 9 | 9 | 5 | 14 | 3 | 5 | 10 | 7 | 1 | 0 | 1 | 4 | 2 | 2 | 0 | 0 | 0 | 1 | 2 | 2 |
Nuclear Periphery | 0 | 3 | 0 | 0 | 0 | 0 | 4 | 1 | 4 | 1 | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 3 | 1 | 1 | 0 | 4 |
Nucleolus | 1 | 0 | 0 | 1 | 0 | 2 | 1 | 2 | 1 | 1 | 0 | 3 | 0 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 2 |
Peroxisomes | 2 | 24 | 4 | 23 | 6 | 7 | 8 | 4 | 2 | 19 | 2 | 2 | 13 | 20 | 5 | 24 | 17 | 18 | 7 | 10 | 17 | 5 | 13 | 24 |
SpindlePole | 23 | 35 | 72 | 52 | 59 | 42 | 70 | 60 | 36 | 52 | 18 | 30 | 29 | 47 | 67 | 93 | 93 | 78 | 18 | 26 | 41 | 12 | 22 | 33 |
Vac/Vac Membrane | 19 | 54 | 20 | 11 | 17 | 13 | 15 | 13 | 13 | 15 | 6 | 11 | 15 | 12 | 13 | 14 | 23 | 19 | 15 | 14 | 8 | 9 | 15 | 24 |
Unique Cell Count | 183 | 256 | 230 | 246 | 268 | 289 | 362 | 291 | 276 | 394 | 445 | 398 | 152 | 213 | 233 | 252 | 243 | 212 | 232 | 334 | 349 | 207 | 274 | 475 |
Labelled Cell Count | 228 | 316 | 262 | 301 | 307 | 347 | 452 | 342 | 348 | 493 | 526 | 466 | 184 | 253 | 263 | 321 | 308 | 282 | 232 | 334 | 349 | 207 | 274 | 475 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.1 | 5.1 | 5.4 | 4.9 | 5.3 | 4.3 | 4.4 | 4.9 | 3.8 | 4.1 | 3.7 | 3.8 | 5.4 | 5.4 | 5.3 | 6.1 | 6.7 | 6.0 | 5.4 | 5.4 | 5.5 |
Std Deviation (1e-4) | 0.7 | 1.1 | 1.4 | 1.4 | 1.7 | 1.1 | 1.3 | 1.5 | 0.8 | 1.0 | 1.1 | 0.9 | 0.7 | 0.9 | 0.9 | 1.5 | 2.3 | 1.7 | 1.1 | 1.2 | 1.0 |
Intensity Change (Log2) | – | – | – | -0.13 | -0.03 | -0.33 | -0.28 | -0.13 | -0.49 | -0.38 | -0.56 | -0.51 | 0.01 | -0.01 | -0.02 | 0.19 | 0.31 | 0.14 | -0.0 | 0.0 | 0.03 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 2.0 | 0 | 0 | 0 | 0.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.4 | 0.7 | 1.0 |
Bud Neck | -2.0 | -1.4 | 0 | 0 | -2.4 | 0 | 0 | 0 | 0 | -2.7 | -2.6 | -2.7 | -2.0 | -0.5 | -2.9 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.7 | 0 |
Cytoplasm | -4.2 | -2.4 | -7.6 | -8.0 | -8.1 | -10.8 | -11.6 | -12.1 | -12.6 | -2.2 | -1.1 | -0.2 | -4.2 | -5.7 | -4.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.1 | 0 | 0 |
Endosome | 2.3 | 1.2 | 0 | 0 | -0.6 | 0 | 0 | 0 | 0 | 5.7 | 4.9 | 4.2 | 2.8 | 4.8 | 5.7 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 8.3 | 6.8 | 0 | 0 | 12.8 | 0 | 0 | 0 | 0 | 3.0 | 1.4 | 0 | 3.8 | 1.7 | 2.2 |
Nucleus | 0 | 0 | 0 | 0 | 3.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 3.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.2 | 3.6 | 0 | 3.6 | 2.8 | 3.3 |
SpindlePole | -2.5 | -2.3 | 0 | 0 | -2.8 | 0 | 0 | 0 | 0 | -2.7 | -2.2 | -0.6 | 1.3 | 1.6 | 1.2 |
Vacuole | -1.9 | -1.0 | -1.9 | -2.3 | -2.0 | -1.8 | -2.6 | -4.7 | -3.3 | 0.4 | -1.2 | -1.3 | -1.3 | 0.3 | 0.1 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasmic Foci | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Eisosomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Lipid Particles | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
None | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Punctate Nuclear | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 8.9845 | 10.0395 | 11.9195 | 11.6788 | 9.8286 | 7.2958 | 12.1811 | 11.647 | 11.8016 | 16.4195 |
Translational Efficiency | 0.2973 | 0.2261 | 0.1879 | 0.1881 | 0.2672 | 0.3331 | 0.3507 | 0.2241 | 0.2546 | 0.1956 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | – |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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