Standard name
Human Ortholog
Description Subunit d of the V0 integral membrane domain of V-ATPase; part of the electrogenic proton pump found in the endomembrane system; required for V1 domain assembly on the vacuolar membrane; the V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) has five subunits

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0
Bud 0 0 0 0 0
Bud Neck 0 0 0 0 0
Bud Site
Cell Periphery 0 0 0 0 0
Cytoplasm 0.82 0 0 0.27 0
Endoplasmic Reticulum 0 0 0 0 0
Endosome 0 0 0 0 0
Golgi 0 0.1 0.29 0 0.51
Mitochondria 0 0 0 0 0
Nucleus 0 0 0 0 0
Nuclear Periphery 0 0 0.15 0.07 0
Nucleolus 0 0.06 0 0.16 0.29
Peroxisomes 0 0 0 0 0
SpindlePole 0 0 0 0 0
Vac/Vac Membrane 0.06 0.71 0.53 0.43 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0
Bud 0 1 0 0 0
Bud Neck 0 0 0 0 0
Bud Site
Cell Periphery 0 0 0 0 0
Cytoplasm 1 0 0 1 0
Endoplasmic Reticulum 0 0 0 0 0
Endosome 0 0 0 0 0
Golgi 0 3 0 0 1
Mitochondria 0 0 0 0 0
Nucleus 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0
Nucleolus 0 1 0 1 0
Peroxisomes 0 0 0 0 0
SpindlePole 0 0 0 0 0
Vac/Vac Membrane 0 21 1 3 0
Unique Cell Count 2 31 2 7 3
Labelled Cell Count 2 31 2 7 3


Vacuole Periphery

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4)
Std Deviation (1e-4)
Intensity Change (Log2)


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration
Actin
Bud
Bud Neck
Bud Periphery
Bud Site
Cell Periphery
Cytoplasm
Cytoplasmic Foci
Eisosomes
Endoplasmic Reticulum
Endosome
Golgi
Lipid Particles
Mitochondria
None
Nuclear Periphery
Nucleolus
Nucleus
Peroxisomes
Punctate Nuclear
Vacuole
Vacuole Periphery

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 246.6183 210.0088 198.1439 261.8189 211.5597 202.9225 253.1742 246.7482 241.1837 243.6923
Translational Efficiency 0.9834 1.204 1.2126 0.8993 1.0168 1.1813 1.1536 0.8598 1.0143 0.9921

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

No result is found for the queried gene(s). Please try another query.


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Vma6-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available