Standard name | |
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Human Ortholog | |
Description | Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C) |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
Bud | 0 | 0 | 0 | 0 | 1 | 1 | 1 | – | 0 | 3 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 1 | 0 | 4 | 7 |
Bud Neck | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 2 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 2 |
Bud Site | 0 | 0 | 1 | 1 | 2 | 2 | 8 | – | 13 | 12 | 10 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 8 | 5 | 12 | 6 | 10 | 15 | – | 12 | 12 | 7 | 3 | 22 | 31 | 52 | 20 | 18 | 15 | 0 | 0 | 1 | 0 | 1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 2 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 1 | 3 | 0 | 0 | 0 | 2 | 4 | 1 |
Endosome | 0 | 4 | 0 | 0 | 1 | 0 | 3 | – | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 0 | 1 | 3 | 2 | 2 | 1 | 8 |
Golgi | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 2 | 2 | 1 |
Mitochondria | 7 | 5 | 4 | 8 | 3 | 14 | 30 | – | 66 | 75 | 104 | 50 | 20 | 6 | 16 | 8 | 1 | 3 | 0 | 2 | 0 | 4 | 3 | 8 |
Nucleus | 210 | 345 | 294 | 204 | 216 | 142 | 211 | – | 187 | 238 | 260 | 284 | 211 | 274 | 273 | 170 | 93 | 101 | 212 | 336 | 281 | 204 | 201 | 223 |
Nuclear Periphery | 0 | 2 | 1 | 4 | 2 | 6 | 6 | – | 3 | 6 | 6 | 6 | 3 | 4 | 16 | 4 | 0 | 2 | 0 | 1 | 1 | 1 | 0 | 1 |
Nucleolus | 16 | 36 | 6 | 27 | 26 | 21 | 53 | – | 88 | 96 | 122 | 101 | 50 | 65 | 99 | 14 | 4 | 7 | 3 | 17 | 11 | 44 | 63 | 64 |
Peroxisomes | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | 2 | 2 | 3 | 1 | 2 | – | 0 | 3 | 1 | 10 | 0 | 1 | 4 | 0 | 1 | 1 | 0 | 4 | 2 | 2 | 5 | 7 |
Vac/Vac Membrane | 0 | 4 | 2 | 0 | 1 | 0 | 1 | – | 1 | 2 | 1 | 1 | 2 | 2 | 0 | 8 | 5 | 6 | 4 | 16 | 9 | 22 | 32 | 33 |
Unique Cell Count | 223 | 366 | 303 | 224 | 238 | 170 | 264 | 255 | 325 | 385 | 363 | 254 | 340 | 376 | 210 | 118 | 125 | 231 | 393 | 317 | 293 | 328 | 370 | |
Labelled Cell Count | 237 | 405 | 316 | 258 | 261 | 197 | 332 | 373 | 448 | 516 | 484 | 308 | 383 | 462 | 233 | 124 | 139 | 231 | 393 | 317 | 293 | 328 | 370 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.9 | 8.1 | 7.1 | 6.7 | 7.2 | 5.6 | 6.1 | – | 5.2 | 5.0 | 5.0 | 5.7 | 7.0 | 6.8 | 6.5 | 10.4 | 10.7 | 9.8 | 6.4 | 6.4 | 6.6 |
Std Deviation (1e-4) | 1.0 | 1.8 | 1.2 | 1.4 | 1.5 | 1.4 | 2.1 | – | 1.3 | 1.0 | 1.0 | 1.1 | 1.6 | 1.4 | 1.5 | 2.8 | 3.1 | 2.7 | 1.2 | 1.5 | 1.4 |
Intensity Change (Log2) | – | – | – | -0.08 | 0.01 | -0.34 | -0.22 | – | -0.45 | -0.51 | -0.51 | -0.33 | -0.03 | -0.07 | -0.14 | 0.55 | 0.59 | 0.46 | -0.16 | -0.15 | -0.11 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 3.6 | 3.0 | 0 | 4.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2.4 | 0 | 2.5 | 2.6 | – | 2.1 | 1.6 | 0.2 | 0 | 3.8 | 4.1 | 5.7 | 4.1 | 5.5 | 4.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1.7 | 0 | 3.8 | 5.0 | – | 8.7 | 8.2 | 9.2 | 5.9 | 3.8 | 0 | 2.2 | 0 | 0 | 0 |
Nucleus | -3.0 | -3.1 | -5.2 | -6.5 | – | -8.1 | -8.3 | -9.7 | -7.1 | -5.6 | -6.5 | -8.5 | -6.1 | -6.2 | -5.7 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 3.3 | 0 | 0 | 0 |
Nucleolus | 4.7 | 4.4 | 4.7 | 7.0 | – | 10.2 | 9.4 | 9.9 | 9.0 | 6.9 | 6.9 | 8.7 | 2.7 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 2.0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.8271 | 3.5026 | 3.0612 | 2.8451 | 2.7282 | 3.3137 | 5.2433 | 5.2092 | 4.7439 | 4.2588 | 4.3008 | 4.8637 | 4.5319 | 4.2769 | 4.2921 | 4.5523 | 4.3442 | 4.2991 |
Actin | 0.0381 | 0 | 0.0001 | 0 | 0 | 0.0037 | 0.0326 | 0 | 0.0041 | 0.0008 | 0.0007 | 0.0001 | 0.0381 | 0.0022 | 0.0026 | 0.0317 | 0.0475 | 0.0059 |
Bud | 0.0003 | 0 | 0 | 0 | 0 | 0.0001 | 0.0011 | 0.0001 | 0.0005 | 0.0003 | 0.0014 | 0.0001 | 0.0009 | 0 | 0 | 0.0001 | 0.0003 | 0.0003 |
Bud Neck | 0.0074 | 0 | 0 | 0 | 0.0001 | 0.0004 | 0.0018 | 0.0001 | 0.0005 | 0.0003 | 0.0011 | 0.0005 | 0.0021 | 0.0003 | 0 | 0.0002 | 0.0013 | 0.0009 |
Bud Periphery | 0.0003 | 0 | 0 | 0 | 0 | 0.0002 | 0.0013 | 0.0001 | 0.0008 | 0.0012 | 0.0041 | 0.0002 | 0.0016 | 0 | 0 | 0.0002 | 0.0006 | 0.0009 |
Bud Site | 0.0034 | 0 | 0.0001 | 0 | 0.0001 | 0.0003 | 0.0121 | 0.0004 | 0.0022 | 0.0008 | 0.0029 | 0.0003 | 0.0042 | 0.0014 | 0.0001 | 0.0004 | 0.0025 | 0.0016 |
Cell Periphery | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0005 | 0.0012 | 0.0001 | 0.0005 | 0 | 0 | 0 | 0.0002 | 0.0002 |
Cytoplasm | 0.0069 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0072 | 0.0009 | 0.0038 | 0.0003 | 0.001 | 0.0001 | 0.0116 | 0.0003 | 0.0002 | 0.0149 | 0.0002 | 0.0007 |
Cytoplasmic Foci | 0.0066 | 0 | 0 | 0 | 0 | 0.0005 | 0.0159 | 0.0008 | 0.0106 | 0.0005 | 0.0138 | 0.0041 | 0.0095 | 0.0025 | 0.0031 | 0.0096 | 0.0005 | 0.0034 |
Eisosomes | 0.0003 | 0 | 0 | 0 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0004 | 0 | 0 | 0.0001 | 0.0006 | 0.0001 |
Endoplasmic Reticulum | 0.0073 | 0.0007 | 0 | 0 | 0 | 0.0001 | 0.0037 | 0.0001 | 0.0019 | 0.0008 | 0.0011 | 0 | 0.0048 | 0 | 0.0008 | 0.0032 | 0.0007 | 0.0019 |
Endosome | 0.0184 | 0.0004 | 0.0001 | 0 | 0 | 0.0016 | 0.0186 | 0.0017 | 0.0164 | 0.0012 | 0.0466 | 0.0028 | 0.0236 | 0.0002 | 0.0042 | 0.006 | 0.0021 | 0.0098 |
Golgi | 0.0053 | 0 | 0 | 0 | 0 | 0.0022 | 0.0085 | 0.0001 | 0.0047 | 0.0003 | 0.0163 | 0.0009 | 0.0081 | 0.0007 | 0.0011 | 0.003 | 0.0024 | 0.0036 |
Lipid Particles | 0.0047 | 0 | 0 | 0 | 0 | 0.0024 | 0.0389 | 0.0008 | 0.0097 | 0.0037 | 0.0069 | 0.001 | 0.0238 | 0.0001 | 0.0071 | 0.0046 | 0.0009 | 0.0107 |
Mitochondria | 0.0027 | 0.0003 | 0.0002 | 0.0001 | 0.0002 | 0.0074 | 0.0114 | 0.0002 | 0.0102 | 0.0138 | 0.0152 | 0.0074 | 0.0165 | 0.0002 | 0.001 | 0.0011 | 0.0029 | 0.0072 |
None | 0.0067 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0.0098 | 0 | 0.0018 | 0.0003 | 0.0003 | 0 | 0.0123 | 0 | 0.0005 | 0.001 | 0.0006 | 0.0005 |
Nuclear Periphery | 0.0355 | 0.01 | 0.0026 | 0.0003 | 0.0003 | 0.0003 | 0.0236 | 0.0019 | 0.0127 | 0.0143 | 0.0042 | 0.0003 | 0.0225 | 0.0009 | 0.0049 | 0.0018 | 0.004 | 0.0084 |
Nucleolus | 0.0599 | 0.0432 | 0.051 | 0.0102 | 0.1429 | 0.1094 | 0.0434 | 0.0386 | 0.0289 | 0.0477 | 0.1507 | 0.0769 | 0.0239 | 0.0323 | 0.0206 | 0.0104 | 0.1879 | 0.0584 |
Nucleus | 0.7612 | 0.9437 | 0.9436 | 0.9893 | 0.8537 | 0.8697 | 0.7224 | 0.9507 | 0.8764 | 0.9048 | 0.6916 | 0.901 | 0.7766 | 0.9567 | 0.9489 | 0.9031 | 0.7416 | 0.8749 |
Peroxisomes | 0.006 | 0 | 0 | 0 | 0 | 0.0009 | 0.0071 | 0 | 0.0046 | 0.0003 | 0.0098 | 0.0015 | 0.0022 | 0.0014 | 0.0037 | 0.0049 | 0.0004 | 0.0046 |
Punctate Nuclear | 0.0262 | 0.0003 | 0.0019 | 0 | 0.0025 | 0.0003 | 0.0358 | 0.0007 | 0.0062 | 0.0015 | 0.0011 | 0.0007 | 0.008 | 0.0004 | 0.0005 | 0.0036 | 0.0017 | 0.0027 |
Vacuole | 0.0012 | 0.0004 | 0.0001 | 0 | 0 | 0.0002 | 0.0021 | 0.0023 | 0.0021 | 0.0035 | 0.0198 | 0.0017 | 0.0051 | 0.0003 | 0.0002 | 0.0001 | 0.0004 | 0.0022 |
Vacuole Periphery | 0.0014 | 0.0008 | 0.0001 | 0 | 0 | 0.0002 | 0.0022 | 0.0003 | 0.0017 | 0.003 | 0.0099 | 0.0004 | 0.0036 | 0.0001 | 0.0004 | 0.0001 | 0.0005 | 0.0013 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 12.2281 | 16.7182 | 16.859 | 18.9344 | 14.6108 | 18.6914 | 19.396 | 17.991 | 14.8884 | 19.8346 |
Translational Efficiency | 1.1529 | 0.9574 | 0.9999 | 0.7155 | 1.0224 | 0.6005 | 0.6619 | 0.8458 | 0.8471 | 0.8148 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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