Standard name | |
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Human Ortholog | |
Description | ATP binding cassette protein; cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 4 | 23 | 16 | 17 | 18 | 12 | 24 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 3 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 2 | 0 | 1 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 13 | 2 | 0 | 3 | 12 | 19 | 39 | 28 | 24 | 46 | 30 | 50 | 0 | 1 | 4 | 1 | 4 | 7 | 1 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 548 | 46 | 207 | 240 | 380 | 383 | 452 | 419 | 214 | 240 | 215 | 238 | 146 | 234 | 259 | 260 | 265 | 347 | 526 | 62 | 198 | 116 | 245 | 208 |
Endoplasmic Reticulum | 5 | 0 | 0 | 2 | 17 | 9 | 83 | 72 | 34 | 59 | 48 | 41 | 6 | 3 | 3 | 7 | 17 | 13 | 5 | 0 | 4 | 4 | 6 | 14 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Golgi | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 4 | 6 | 15 | 19 | 34 | 51 | 54 | 70 | 0 | 0 | 2 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 1 | 2 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 7 | 1 | 1 | 3 | 5 | 0 | 0 | 0 | 2 | 2 | 3 | 1 | 0 | 2 | 1 | 1 | 0 |
Unique Cell Count | 552 | 46 | 207 | 242 | 401 | 402 | 568 | 528 | 285 | 350 | 319 | 351 | 148 | 237 | 264 | 263 | 268 | 352 | 541 | 66 | 213 | 126 | 258 | 233 |
Labelled Cell Count | 566 | 48 | 207 | 246 | 416 | 422 | 620 | 565 | 328 | 421 | 367 | 433 | 152 | 239 | 270 | 272 | 290 | 372 | 541 | 66 | 213 | 126 | 258 | 233 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 59.8 | 48.9 | 31.8 | 31.6 | 26.6 | 22.3 | 19.8 | 18.6 | 16.2 | 15.4 | 14.2 | 13.5 | 49.3 | 47.4 | 40.1 | 50.2 | 62.0 | 65.7 | 51.6 | 52.8 | 53.5 |
Std Deviation (1e-4) | 12.5 | 7.8 | 7.4 | 7.9 | 5.4 | 4.2 | 3.9 | 3.6 | 3.2 | 3.1 | 3.1 | 2.9 | 11.6 | 10.2 | 9.2 | 19.2 | 21.1 | 19.7 | 14.0 | 11.7 | 15.7 |
Intensity Change (Log2) | – | – | – | -0.01 | -0.26 | -0.51 | -0.68 | -0.77 | -0.97 | -1.05 | -1.16 | -1.23 | 0.63 | 0.58 | 0.34 | 0.66 | 0.96 | 1.05 | 0.7 | 0.73 | 0.75 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 2.9 | 0 | 3.6 | 3.3 | 0 | 3.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 3.2 | 3.9 | 3.4 | 4.3 | 5.4 | 4.5 | 5.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.3 | -3.4 | -3.2 | -7.1 | -7.1 | -7.8 | -9.0 | -9.2 | -9.1 | -1.7 | -1.6 | -2.0 | -1.5 | -1.5 | -1.7 |
Endoplasmic Reticulum | 0 | 3.0 | 0 | 5.8 | 5.6 | 5.2 | 6.2 | 5.9 | 5.1 | 0 | 0 | 0 | 0 | 3.7 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 2.8 | 5.2 | 5.8 | 6.2 | 6.9 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 45.7716 | 58.8505 | 52.7011 | 51.4057 | 50.3663 | 56.8541 | 43.6632 | 62.3244 | 55.4563 | 52.2335 | 52.3719 | 58.6429 | 35.0818 | 54.1758 | 45.7768 | 48.8726 | 40.5035 | 44.6703 |
Actin | 0.0018 | 0.0016 | 0.0021 | 0.0023 | 0.0009 | 0.001 | 0.0152 | 0.0005 | 0.0104 | 0.0008 | 0.0037 | 0.0004 | 0.0183 | 0.0004 | 0.0018 | 0.0002 | 0.036 | 0.0026 |
Bud | 0.0013 | 0.0014 | 0.0018 | 0.0022 | 0.0014 | 0.0016 | 0.001 | 0.0006 | 0.001 | 0.0011 | 0.0007 | 0.0003 | 0.0019 | 0.0004 | 0.0007 | 0.001 | 0.0003 | 0.0011 |
Bud Neck | 0.0015 | 0.0022 | 0.0013 | 0.0056 | 0.0013 | 0.0026 | 0.0019 | 0.0013 | 0.0012 | 0.0008 | 0.0009 | 0.0013 | 0.001 | 0.0003 | 0.0014 | 0.0004 | 0.0008 | 0.0012 |
Bud Periphery | 0.0016 | 0.0013 | 0.0016 | 0.0021 | 0.0004 | 0.0009 | 0.0015 | 0.0003 | 0.0013 | 0.0004 | 0.0006 | 0.0002 | 0.0019 | 0.0004 | 0.0002 | 0.0002 | 0.0002 | 0.0005 |
Bud Site | 0.0006 | 0.002 | 0.0012 | 0.0009 | 0.0002 | 0.0004 | 0.0032 | 0.0005 | 0.0024 | 0.0006 | 0.0003 | 0.0001 | 0.0022 | 0.0004 | 0.0012 | 0.0001 | 0.0005 | 0.0002 |
Cell Periphery | 0.0119 | 0.016 | 0.0081 | 0.0225 | 0.0003 | 0.0027 | 0.0074 | 0.0034 | 0.0037 | 0.0015 | 0.0045 | 0.0002 | 0.0019 | 0.0025 | 0.0007 | 0.0005 | 0.0001 | 0.0005 |
Cytoplasm | 0.5737 | 0.8421 | 0.7537 | 0.5328 | 0.9242 | 0.8459 | 0.795 | 0.9612 | 0.9007 | 0.8842 | 0.8633 | 0.9156 | 0.7247 | 0.9596 | 0.9128 | 0.8211 | 0.8249 | 0.9093 |
Cytoplasmic Foci | 0.0015 | 0.001 | 0.0017 | 0.0017 | 0.0053 | 0.004 | 0.0062 | 0.0009 | 0.0021 | 0.0084 | 0.0036 | 0.002 | 0.0121 | 0.0011 | 0.0159 | 0.0035 | 0.0125 | 0.0065 |
Eisosomes | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0009 | 0 | 0.0002 | 0 | 0 | 0 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.172 | 0.0465 | 0.0547 | 0.1098 | 0.0026 | 0.0891 | 0.0458 | 0.0062 | 0.0156 | 0.0029 | 0.0453 | 0.0331 | 0.0582 | 0.0182 | 0.0051 | 0.0217 | 0.0013 | 0.0344 |
Endosome | 0.0073 | 0.0032 | 0.0066 | 0.0104 | 0.0166 | 0.0136 | 0.0159 | 0.0034 | 0.0068 | 0.0161 | 0.0057 | 0.0024 | 0.0365 | 0.0012 | 0.0174 | 0.0126 | 0.0213 | 0.0193 |
Golgi | 0.0008 | 0.0008 | 0.0006 | 0.0009 | 0.0006 | 0.0017 | 0.0032 | 0.0003 | 0.001 | 0.0008 | 0.0015 | 0.0002 | 0.0097 | 0.0003 | 0.0068 | 0.0004 | 0.0251 | 0.0028 |
Lipid Particles | 0.0009 | 0.0006 | 0.0005 | 0.0012 | 0.0001 | 0.0003 | 0.0045 | 0.0003 | 0.0008 | 0.0012 | 0.0011 | 0.0002 | 0.0145 | 0.0001 | 0.0072 | 0.0001 | 0.0124 | 0.0001 |
Mitochondria | 0.0021 | 0.0009 | 0.0108 | 0.0023 | 0.0006 | 0.0061 | 0.0169 | 0.0015 | 0.0055 | 0.0006 | 0.0052 | 0.0028 | 0.025 | 0.0001 | 0.0014 | 0.0002 | 0.0431 | 0.0014 |
None | 0.0006 | 0.0002 | 0.0003 | 0.0003 | 0.0003 | 0.0003 | 0.0022 | 0.0001 | 0.0004 | 0.0009 | 0.0011 | 0.0012 | 0.0061 | 0.0001 | 0.0005 | 0.0002 | 0.0002 | 0.0002 |
Nuclear Periphery | 0.0456 | 0.0161 | 0.0156 | 0.028 | 0.0086 | 0.0059 | 0.0188 | 0.0028 | 0.0058 | 0.0036 | 0.0087 | 0.0073 | 0.0235 | 0.0013 | 0.0021 | 0.0038 | 0.0008 | 0.0022 |
Nucleolus | 0.0002 | 0.0001 | 0.0004 | 0.0006 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0038 | 0.0012 | 0 | 0.0002 | 0 | 0 | 0 |
Nucleus | 0.0112 | 0.0043 | 0.0052 | 0.0101 | 0.0085 | 0.0032 | 0.0076 | 0.0022 | 0.0033 | 0.0042 | 0.0021 | 0.0213 | 0.0077 | 0.0008 | 0.0012 | 0.0016 | 0.0007 | 0.0011 |
Peroxisomes | 0 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.001 | 0 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0039 | 0 | 0.0014 | 0 | 0.0047 | 0.0001 |
Punctate Nuclear | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0003 | 0.0001 | 0.0017 | 0.0001 | 0.0003 | 0.0004 | 0.0001 | 0.0009 | 0.0027 | 0 | 0.0003 | 0 | 0.0002 | 0 |
Vacuole | 0.1297 | 0.0519 | 0.1122 | 0.2041 | 0.0214 | 0.0141 | 0.0449 | 0.0125 | 0.0317 | 0.062 | 0.0462 | 0.0046 | 0.0364 | 0.0121 | 0.0184 | 0.1064 | 0.0119 | 0.0128 |
Vacuole Periphery | 0.0355 | 0.0077 | 0.0214 | 0.062 | 0.0061 | 0.0061 | 0.0054 | 0.0016 | 0.0049 | 0.0092 | 0.0041 | 0.0021 | 0.0105 | 0.0007 | 0.0032 | 0.0256 | 0.0029 | 0.0037 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 168.8445 | 177.9927 | 172.6393 | 160.4704 | 141.2286 | 143.7225 | 143.7246 | 140.5861 | 126.6622 | 147.3015 |
Translational Efficiency | 1.1278 | 1.1387 | 1.0411 | 0.9892 | 1.1013 | 1.0848 | 1.0403 | 0.8411 | 1.0119 | 1.045 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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