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Endocytosis

  • Legend
    • actin: Actin patch
    • coat: Cortical patch
    • LE: Late endosome
    • vac: Vacuole
    • gw: Genome wide screen
    • secondary: secondary screen
    • SMF: Single mutant fitness
    • SD: Standard deviation
  • Columns
    • A-G: strain information
    • H-AM: p-value, penetrance, cell count and well count data for each marker and screen type
    • AN-BG: total cell count, total well count, combined mean penetrance, penetrance SD data for each marker
    • BH-DE: data on phenotype fractions for each phenotype and screen type
    • DF-GK: combined phenotype fraction, and phenotype fraction SD, (stringent) SPM calls for each phenotype

Cell Cycle Omics

  • Legend
    • GE: Gene Expression
    • TE: Translational Efficiency
    • PA: Protein Abundance
    • Loc: Protein Localization
    • R1, R2 and R3: Biological replicate 1, 2 and 3
  • Columns
    • A-B: Gene information
    • C-O: Gene Expression data for each cell cycle phase across two biological replicates
    • P-AB: Translational Efficiency for each cell cycle phase data across two biological replicates
    • AC-AW: Protein Abundance data for each cell cycle phase across three biological replicates
    • AX-QF: Protein Localization data for each compartment and cell cycle phase across three biological replicates
    • QG-QU: Cell count data for each cell cycle phase across three biological replicates

CYCLoPs

  • Sheets
    • LOCscore_ensLOC: quantitative measurement of localization in each ensLOC screen
    • LOCscore_DeepLoc: quantitative measurement of localization in each DeepLoc screen
    • Zscore: quantitative localization changes in sub-cellular compartments
    • Abundance: GFP intensity measures of the protein in each screen
        Columns
      • [screen]_Mean - Mean Cell GFP Intensity (1e-4)
      • [screen]_Stdev - Standard Deviation (1e-4)
      • [screen]_Change - Intensity Change (Log2)
  • Notes
    • strains with signal below threshold were not filtered from the dataset
    • ensLOC and DeepLoc scores that are less than 0.05 are rounded-down to 0