| Standard name | |
|---|---|
| Human Ortholog | |
| Description (SGD) | Alpha subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins |
| ensLOC | DeepLoc | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
| Cortical Patches | 1 | 1 | 2 | 5 | 0 | 1 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | 4 | 2 | 1 | 2 | 3 | 7 | 4 | 5 | 2 | 14 | 37 |
| Bud | 2 | 0 | 0 | 1 | 6 | 6 | 7 | 8 | 8 | 8 | 4 | 9 | 1 | 0 | 3 | 2 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 3 |
| Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
| Cell Periphery | 2 | 2 | 0 | 2 | 3 | 2 | 2 | 1 | 1 | 2 | 1 | 0 | 1 | 3 | 3 | 0 | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 0 |
| Cytoplasm | 2 | 0 | 1 | 7 | 12 | 11 | 13 | 15 | 8 | 4 | 5 | 8 | 0 | 6 | 4 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Endoplasmic Reticulum | 0 | 2 | 2 | 0 | 1 | 1 | 0 | 1 | 3 | 0 | 1 | 1 | 0 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| Endosome | 0 | 0 | 0 | 0 | 6 | 2 | 2 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 5 | 2 |
| Golgi | 1 | 0 | 2 | 6 | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 2 | 0 | 9 | 16 | 4 | 19 | 22 | 11 | 10 | 15 | 5 | 9 | 31 |
| Mitochondria | 241 | 96 | 171 | 189 | 242 | 257 | 359 | 406 | 275 | 364 | 301 | 312 | 64 | 145 | 217 | 6 | 7 | 6 | 228 | 77 | 144 | 70 | 149 | 203 |
| Nucleus | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Nuclear Periphery | 7 | 4 | 8 | 5 | 7 | 13 | 25 | 31 | 36 | 29 | 22 | 24 | 3 | 5 | 7 | 2 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 1 |
| Nucleolus | 22 | 6 | 9 | 14 | 30 | 40 | 51 | 67 | 56 | 41 | 30 | 37 | 4 | 7 | 7 | 6 | 6 | 5 | 1 | 2 | 0 | 0 | 1 | 1 |
| Peroxisomes | 4 | 0 | 2 | 6 | 2 | 4 | 10 | 11 | 2 | 7 | 3 | 2 | 1 | 4 | 7 | 9 | 3 | 2 | 8 | 1 | 11 | 6 | 23 | 29 |
| SpindlePole | 0 | 0 | 0 | 1 | 2 | 2 | 3 | 6 | 0 | 5 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| Vac/Vac Membrane | 16 | 7 | 7 | 5 | 8 | 1 | 12 | 11 | 8 | 8 | 6 | 9 | 3 | 11 | 14 | 5 | 4 | 8 | 1 | 3 | 2 | 0 | 1 | 6 |
| Unique Cell Count | 258 | 100 | 180 | 201 | 273 | 281 | 407 | 479 | 297 | 386 | 321 | 338 | 65 | 163 | 236 | 36 | 42 | 52 | 262 | 104 | 184 | 88 | 212 | 326 |
| Labelled Cell Count | 298 | 118 | 204 | 241 | 323 | 342 | 489 | 564 | 402 | 472 | 376 | 412 | 78 | 195 | 281 | 42 | 49 | 59 | 262 | 104 | 184 | 88 | 212 | 326 |
| Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Mean Cell GFP Intensity (1e-4) | 16.9 | 16.3 | 15.0 | 17.7 | 17.1 | 14.4 | 14.0 | 12.9 | 12.6 | 11.9 | 11.3 | 12.4 | 18.8 | 19.5 | 18.2 | 16.1 | 18.6 | 20.7 | 17.5 | 17.3 | 18.5 |
| Std Deviation (1e-4) | 4.4 | 3.9 | 4.4 | 5.1 | 4.5 | 4.1 | 3.8 | 3.9 | 3.7 | 3.5 | 3.0 | 3.7 | 4.3 | 9.5 | 4.0 | 4.7 | 6.2 | 5.6 | 5.0 | 4.6 | 4.8 |
| Intensity Change (Log2) | – | – | – | 0.24 | 0.19 | -0.06 | -0.1 | -0.22 | -0.25 | -0.33 | -0.41 | -0.27 | 0.32 | 0.38 | 0.28 | 0.1 | 0.31 | 0.46 | 0.22 | 0.21 | 0.3 |
| Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Cytoplasm | 0 | 2.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.3 | 2.8 | 0 | 0 | 8.6 |
| Mitochondria | -0.4 | -2.3 | -1.4 | -2.6 | -3.5 | -1.0 | -0.3 | -0.6 | -1.2 | 1.2 | -2.1 | -1.2 | -11.2 | -11.5 | -12.5 |
| Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Nuclear Periphery | -1.1 | -1.1 | 0.1 | 0.8 | 1.0 | 2.8 | 1.4 | 1.1 | 1.2 | 0 | -0.7 | -0.8 | 0 | 0 | 0 |
| Nucleolus | 0.8 | 2.2 | 3.1 | 2.8 | 3.2 | 4.3 | 2.2 | 1.7 | 2.3 | 0 | -0.3 | -1.1 | 0 | 0 | 0 |
| Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Vacuole | -0.8 | -0.6 | 0 | -0.6 | 0 | -0.7 | 0 | 0 | -0.8 | 0 | 1.2 | 0.9 | 0 | 0 | 0 |
| R1 | R2 | R3 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
| Concentration | 25.1233 | 26.6518 | 25.9525 | 24.7636 | 23.2103 | 26.1643 | 23.641 | 26.0834 | 23.0875 | 23.736 | 21.6066 | 23.6813 | 27.3441 | 30.1366 | 28.1674 | 24.9279 | 22.2337 | 26.479 |
| Actin | 0.0112 | 0.0005 | 0.003 | 0.0001 | 0.0145 | 0.0106 | 0.0335 | 0.0013 | 0.0023 | 0.0005 | 0.0087 | 0.0002 | 0.0095 | 0.0056 | 0.009 | 0.0007 | 0.0229 | 0.0004 |
| Bud | 0.0002 | 0 | 0.0001 | 0 | 0.0005 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0006 | 0 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 |
| Bud Neck | 0.0001 | 0 | 0.0001 | 0 | 0.0027 | 0.0001 | 0.001 | 0 | 0 | 0 | 0.0004 | 0 | 0.0015 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 |
| Bud Periphery | 0.0003 | 0 | 0.0002 | 0 | 0.0006 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0 | 0.0007 | 0 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 |
| Bud Site | 0.0003 | 0 | 0.0004 | 0 | 0.0073 | 0.0001 | 0.001 | 0.0001 | 0.0013 | 0 | 0.005 | 0 | 0.003 | 0.0003 | 0.0025 | 0.0003 | 0.0005 | 0 |
| Cell Periphery | 0.0002 | 0.0001 | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0001 |
| Cytoplasm | 0.0005 | 0 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0 | 0 | 0 | 0.0008 | 0 | 0.0046 | 0 | 0.0005 | 0.0004 | 0.0009 | 0 |
| Cytoplasmic Foci | 0.0007 | 0.0001 | 0.0007 | 0 | 0.0013 | 0.0016 | 0.0069 | 0.0002 | 0.0001 | 0 | 0.047 | 0.0001 | 0.0188 | 0.0005 | 0.0063 | 0.0198 | 0.0317 | 0.0002 |
| Eisosomes | 0.0007 | 0.0002 | 0.0008 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0.0003 | 0.0002 | 0.0004 | 0.0008 | 0.0001 |
| Endoplasmic Reticulum | 0.0004 | 0 | 0.0004 | 0 | 0.0005 | 0.0001 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0012 | 0 | 0.0001 | 0.0001 | 0.0007 | 0 |
| Endosome | 0.0049 | 0.0005 | 0.0005 | 0 | 0.0035 | 0.0011 | 0.0008 | 0.0007 | 0.0001 | 0.0001 | 0.0032 | 0.0003 | 0.0043 | 0.0004 | 0.0006 | 0.0004 | 0.0096 | 0.0004 |
| Golgi | 0.0021 | 0.0016 | 0.0009 | 0.0001 | 0.0027 | 0.0031 | 0.0024 | 0.0036 | 0.0003 | 0.0001 | 0.0062 | 0.0009 | 0.0025 | 0.01 | 0.0045 | 0.0005 | 0.006 | 0.0055 |
| Lipid Particles | 0.0054 | 0.0038 | 0.0033 | 0.0015 | 0.0024 | 0.0062 | 0.0113 | 0.0054 | 0.0008 | 0.0022 | 0.0551 | 0.0113 | 0.0229 | 0.0044 | 0.0094 | 0.0283 | 0.0459 | 0.0124 |
| Mitochondria | 0.947 | 0.983 | 0.9758 | 0.9949 | 0.95 | 0.9509 | 0.9009 | 0.9781 | 0.9871 | 0.9955 | 0.8131 | 0.9659 | 0.8964 | 0.9705 | 0.9497 | 0.9227 | 0.8015 | 0.966 |
| None | 0.0013 | 0 | 0.0005 | 0 | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0038 | 0 | 0.0082 | 0 | 0.0052 | 0.0024 | 0.0079 | 0 |
| Nuclear Periphery | 0.0023 | 0 | 0.0002 | 0 | 0.0009 | 0.0005 | 0.0001 | 0 | 0 | 0 | 0.0033 | 0.0004 | 0.0068 | 0 | 0.0004 | 0.0009 | 0.006 | 0 |
| Nucleolus | 0.0026 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.016 | 0.0001 | 0.0001 | 0 | 0.0064 | 0.0001 | 0.0012 | 0.0003 | 0.0011 | 0.0079 | 0.0088 | 0.0001 |
| Nucleus | 0.0055 | 0 | 0.0001 | 0 | 0.0008 | 0.0001 | 0.0012 | 0 | 0.0001 | 0 | 0.0014 | 0.0001 | 0.0014 | 0 | 0.0007 | 0.0016 | 0.0012 | 0 |
| Peroxisomes | 0.0017 | 0.001 | 0.0051 | 0.0002 | 0.0008 | 0.004 | 0.0196 | 0.0029 | 0.0022 | 0.0006 | 0.0266 | 0.0003 | 0.0048 | 0.0045 | 0.0017 | 0.0034 | 0.0124 | 0.0012 |
| Punctate Nuclear | 0.0033 | 0 | 0.0001 | 0 | 0.0021 | 0.0001 | 0.0004 | 0 | 0 | 0 | 0.0121 | 0 | 0.0075 | 0 | 0.0038 | 0.0024 | 0.0066 | 0 |
| Vacuole | 0.0018 | 0.0011 | 0.0017 | 0.0002 | 0.0015 | 0.0012 | 0.0004 | 0.0008 | 0.0014 | 0.0001 | 0.0007 | 0.0008 | 0.0011 | 0.0002 | 0.0003 | 0.0008 | 0.0023 | 0.0005 |
| Vacuole Periphery | 0.0075 | 0.0077 | 0.0055 | 0.0028 | 0.0061 | 0.0199 | 0.0036 | 0.0064 | 0.003 | 0.0005 | 0.0042 | 0.0195 | 0.0034 | 0.0025 | 0.0038 | 0.0066 | 0.0334 | 0.0131 |
| R1 | R2 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
| Gene Expression | 41.8822 | 30.6328 | 44.4515 | 43.2031 | 30.113 | 46.4254 | 48.1799 | 45.7577 | 56.4999 | 51.0109 |
| Translational Efficiency | 0.8544 | 1.0443 | 0.7089 | 0.933 | 1.0504 | 1.0822 | 0.8793 | 0.8884 | 0.8619 | 0.8726 |
| Dataset | Hit |
|---|---|
| Protein Concentration | ✔ |
| Protein Localization | ✘ |
| Gene Expression | ✘ |
| Translational Efficiency | ✘ |
Penetrance values (percentage of cells with morphologically abnormal structure) at each time point for each of the subcellular structures monitored.
| TP0 | TP3 | TP6 | TP9 | TP12 | TP15 | TP18 | TP21 | TP24 | |
|---|---|---|---|---|---|---|---|---|---|
| Autophagosome (ATG8) | 57.500000 | 49.367089 | 72.222222 | 65.909091 | 57.575758 | 85.714286 | 69.090909 | 75.757576 | 74.074074 |
| Septin (CDC11) | 24.427481 | 31.623932 | 46.728972 | 61.818182 | 69.565217 | 78.048780 | 80.000000 | 82.000000 | 81.818182 |
| Spindle & SPB (DAD2) | 63.265306 | 60.000000 | 70.967742 | 86.274510 | 88.372093 | 75.000000 | 100.000000 | 95.000000 | 96.551724 |
| P-bodies (DCP2) | 41.176471 | 85.000000 | 100.000000 | 100.000000 | 97.619048 | 100.000000 | 97.297297 | 100.000000 | 91.428571 |
| Inner Nuclear Membrane (HEH2) | 60.714286 | 65.822785 | 66.265060 | 68.000000 | 66.000000 | 100.000000 | 100.000000 | 89.473684 | 97.435897 |
| Metacaspase (MCA1) | 15.062762 | 88.549618 | 83.734940 | 87.977099 | 96.363636 | 98.207171 | 94.827586 | 87.212276 | 95.322940 |
| Plasma Membrane (MID2) | 51.020408 | 44.615385 | 63.963964 | 63.157895 | 94.117647 | 96.052632 | 98.039216 | 98.000000 | 100.000000 |
| Necrosis Factor (NHP6A) | 52.702703 | 61.988304 | 94.086022 | 98.214286 | 97.714286 | 100.000000 | 97.590361 | 95.555556 | 90.909091 |
| Nucleolus (NOP10) | 26.697353 | 28.449198 | 38.614900 | 56.656347 | 58.470588 | 74.002751 | 86.412214 | 89.531250 | 92.543860 |
| Kinetochore (NUF2) | 27.777778 | 51.851852 | 52.272727 | 37.500000 | 83.333333 | 75.000000 | 85.714286 | 100.000000 | 100.000000 |
| Mitochondria (OM45) | 40.974212 | 59.610028 | 81.005587 | 89.295775 | 98.442368 | 97.777778 | 94.719472 | 95.638629 | 97.635135 |
| Eisosomes (PIL1) | 23.913043 | 55.782313 | 72.847682 | 79.761905 | 91.447368 | 92.857143 | 95.967742 | 98.181818 | 96.875000 |
| Proteasome (PRE2) | 43.424318 | 32.579186 | 56.097561 | 76.096491 | 89.302326 | 90.322581 | 87.640449 | 87.356322 | 65.818182 |
| DNA Damage Foci (RAD52) | 17.021277 | 15.590200 | 23.569794 | 38.095238 | 46.606335 | 63.963964 | 60.367454 | 82.597403 | 93.333333 |
| Actin Patches (SAC6) | 44.715447 | 50.505051 | 51.351351 | 51.063830 | 92.307692 | 100.000000 | 100.000000 | 98.648649 | 100.000000 |
| Golgi, Early (SEC21) | 45.360825 | 38.461538 | 47.236181 | 53.773585 | 45.989305 | 67.934783 | 91.463415 | 91.616766 | 98.245614 |
| Golgi, Late (SEC7) | 23.809524 | 56.962025 | 82.745098 | 92.996109 | 97.047970 | 98.031496 | 97.785978 | 91.928251 | 82.113821 |
| Endosomes (SNF7) | 29.870130 | 35.627530 | 50.592885 | 67.049808 | 84.586466 | 81.509434 | 74.576271 | 64.356436 | 61.224490 |
| Endoplasmic Reticulum (SPF1) | 47.619048 | 46.766169 | 75.268817 | 87.951807 | 87.647059 | 84.357542 | 98.113208 | 96.453901 | 98.425197 |
| Lipid Droplets (TGL3) | 37.037037 | 61.363636 | 51.020408 | 89.655172 | 80.000000 | 71.794872 | 88.888889 | 70.588235 | 70.000000 |
| Vacuole (VPH1) | 50.152905 | 31.481481 | 51.388889 | 72.569444 | 88.979592 | 94.347826 | 93.859649 | 95.808383 | 100.000000 |
Number of cells analysed for each strain. R1, R2: biological replicates; R1 & R2: both replicates combined.
| R1 | R2 | R1 & R2 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 |
| 2237 | 1480 | 165 | 1399 | 1137 | 1490 | 175 | 417 | 3374 | 2970 | 340 | 1816 |
Mean and standard deviation of cell GFP intensity, and intensity change (log2) of each mutant relative to wild type.
| R1 | R2 | R1 & R2 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 | |
| Mean | 1083.62 | 1716.92 | 2465.11 | 1645.56 | 1609.44 | 1589.27 | 2298.88 | 1590.06 | 1260.82 | 1652.88 | 2379.55 | 1632.82 |
| Standard Deviation | 231.85 | 429.25 | 440.35 | 330.13 | 349.23 | 405.28 | 387.74 | 409.24 | 372.17 | 422.25 | 422.36 | 350.66 |
| Intensity Change Log 2 | — | 0.663964 | 1.185793 | 0.602720 | — | -0.018195 | 0.514372 | -0.017478 | — | 0.295923 | 0.822924 | 0.264796 |
Localization score for each compartment. Values highlighted in green denote significant localization scores (marked * in the plot).
| R1 | R2 | R1 & R2 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 | WT | UBP2 | UBP14 | UBP2UBP14 | |
| Actin | 0.001354 | 0.008024 | 0.006128 | 0.005460 | 0.001995 | 0.007142 | 0.007129 | 0.005558 | 0.001570 | 0.007581 | 0.006643 | 0.005483 |
| Bud Neck | 0.001256 | 0.001615 | 0.013681 | 0.002174 | 0.001050 | 0.001273 | 0.007856 | 0.006675 | 0.001187 | 0.001444 | 0.010683 | 0.003208 |
| Bud Site | 0.003507 | 0.001513 | 0.010396 | 0.002385 | 0.000892 | 0.000931 | 0.007044 | 0.019981 | 0.002626 | 0.001221 | 0.008671 | 0.006426 |
| Cell Periphery | 0.000415 | 0.000068 | 0.000276 | 0.000208 | 0.000060 | 0.000099 | 0.000174 | 0.002537 | 0.000295 | 0.000084 | 0.000223 | 0.000743 |
| Cytoplasm | 0.000437 | 0.000263 | 0.000661 | 0.000290 | 0.000328 | 0.000365 | 0.000522 | 0.001374 | 0.000400 | 0.000314 | 0.000590 | 0.000539 |
| Cytoplasmic Foci | 0.005675 | 0.018299 | 0.110569 | 0.008569 | 0.025207 | 0.017433 | 0.075695 | 0.011969 | 0.012257 | 0.017865 | 0.092619 | 0.009349 |
| Eisosomes | 0.000291 | 0.002025 | 0.002117 | 0.000512 | 0.001167 | 0.001704 | 0.001142 | 0.000498 | 0.000586 | 0.001864 | 0.001615 | 0.000509 |
| Endoplasmic Reticulum | 0.000127 | 0.000109 | 0.000205 | 0.000430 | 0.000088 | 0.000116 | 0.000226 | 0.001314 | 0.000114 | 0.000113 | 0.000216 | 0.000633 |
| Endosome | 0.002350 | 0.002036 | 0.001814 | 0.004408 | 0.000926 | 0.002178 | 0.002949 | 0.021061 | 0.001870 | 0.002107 | 0.002398 | 0.008232 |
| Golgi | 0.005180 | 0.023651 | 0.014389 | 0.030355 | 0.010736 | 0.025356 | 0.028995 | 0.059604 | 0.007052 | 0.024507 | 0.021907 | 0.037071 |
| Lipid Particles | 0.003186 | 0.005723 | 0.010994 | 0.007310 | 0.006039 | 0.006817 | 0.013468 | 0.006387 | 0.004148 | 0.006272 | 0.012268 | 0.007098 |
| Mitochondria | 0.951001* | 0.909734* | 0.719688* | 0.895421* | 0.924586* | 0.911730* | 0.763001* | 0.776772* | 0.942100* | 0.910735* | 0.741981* | 0.868176* |
| Mitotic Spindle | 0.000474 | 0.000642 | 0.019649 | 0.004530 | 0.000490 | 0.000932 | 0.018890 | 0.003309 | 0.000479 | 0.000787 | 0.019259 | 0.004249 |
| None | 0.001571 | 0.002274 | 0.003953 | 0.002505 | 0.003479 | 0.002359 | 0.003793 | 0.003176 | 0.002214 | 0.002317 | 0.003871 | 0.002659 |
| Nuclear Periphery | 0.000124 | 0.000156 | 0.005264 | 0.001416 | 0.000365 | 0.000204 | 0.004001 | 0.001441 | 0.000206 | 0.000180 | 0.004614 | 0.001421 |
| Nuclear Periphery Foci | 0.000141 | 0.000176 | 0.001669 | 0.000532 | 0.000271 | 0.000196 | 0.001823 | 0.000743 | 0.000185 | 0.000186 | 0.001748 | 0.000580 |
| Nucleolus | 0.000537 | 0.000662 | 0.006857 | 0.000586 | 0.000977 | 0.000387 | 0.002557 | 0.000591 | 0.000685 | 0.000524 | 0.004644 | 0.000587 |
| Nucleus | 0.000195 | 0.000063 | 0.000361 | 0.000579 | 0.000216 | 0.000147 | 0.000275 | 0.000275 | 0.000202 | 0.000105 | 0.000317 | 0.000510 |
| Peroxisomes | 0.012037 | 0.017037 | 0.034865 | 0.004158 | 0.012351 | 0.014025 | 0.017508 | 0.007028 | 0.012143 | 0.015526 | 0.025932 | 0.004817 |
| Vacuole | 0.004659 | 0.003110 | 0.016155 | 0.008568 | 0.003532 | 0.003093 | 0.018274 | 0.031949 | 0.004279 | 0.003102 | 0.017246 | 0.013937 |
| Vacuole Periphery | 0.005481 | 0.002818 | 0.020308 | 0.019603 | 0.005247 | 0.003515 | 0.024678 | 0.037759 | 0.005402 | 0.003168 | 0.022557 | 0.023772 |
Change in localization of each mutant relative to its control (e.g. UBP2_WT: ubp2Δ vs wild type). Values highlighted in yellow (increase) or blue (decrease) denote significant changes (marked * in the plot).
| R1 | R2 | R1 & R2 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UBP2_ |
UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
UBP2_ |
UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
UBP2_ |
UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
UBP2UBP14_ |
|
| Actin | -5.99 | -4.13 | -4.38 | 1.80 | 0.45 | -4.86 | -3.15 | -2.13 | 0.84 | 0.70 | -7.88 | -5.06 | -4.78 | 1.94 | 0.92 |
| Bud Neck | -1.00 | -5.16 | -1.86 | -1.05 | 4.70 | -0.80 | -5.21 | -3.45 | -3.31 | 0.59 | -1.10 | -7.01 | -3.78 | -3.24 | 5.17 |
| Bud Site | 2.29 | -1.49 | 1.28 | -1.30 | 1.73 | -0.05 | -1.53 | -4.12 | -4.12 | -1.89 | 2.58 | -1.99 | -3.13 | -4.49 | 0.77 |
| Cell Periphery | 2.74 | 0.72 | 1.60 | -5.19 | 0.44 | -2.03 | -2.23 | -3.79 | -3.73 | -3.59 | 2.52 | 0.59 | -2.58 | -4.31 | -3.02 |
| Cytoplasm | 1.14 | -0.94 | 0.93 | -0.54 | 1.93 | -0.31 | -1.23 | -2.14 | -2.05 | -1.66 | 0.72 | -1.26 | -0.91 | -1.76 | 0.35 |
| Cytoplasmic Foci | -8.14 | -7.45 | -2.60 | 5.72 | 7.23 | 2.84 | -5.13 | 4.05 | 2.00 | 6.47 | -4.12 | -9.45 | 2.24 | 6.31 | 9.78 |
| Eisosomes | -10.28 | -5.66 | -2.69 | 8.16 | 4.84 | -3.26 | 0.14 | 5.32 | 8.00 | 3.75 | -11.37 | -5.69 | 1.05 | 10.95 | 5.88 |
| Endoplasmic Reticulum | 0.85 | -1.34 | -2.99 | -3.18 | -1.98 | -1.60 | -2.64 | -3.65 | -3.57 | -3.20 | 0.09 | -2.59 | -4.72 | -4.75 | -3.61 |
| Endosome | 0.56 | 1.17 | -3.26 | -3.30 | -4.03 | -3.30 | -4.01 | -5.65 | -5.27 | -5.04 | -0.66 | -1.47 | -6.63 | -6.25 | -5.94 |
| Golgi | -8.60 | -3.15 | -8.79 | -1.96 | -4.04 | -5.70 | -3.51 | -6.09 | -4.18 | -3.28 | -10.74 | -4.92 | -10.37 | -3.95 | -3.73 |
| Lipid Particles | -2.99 | -3.56 | -3.22 | -1.20 | 1.51 | -0.67 | -2.99 | -0.18 | 0.20 | 2.33 | -3.06 | -4.92 | -2.70 | -0.74 | 2.74 |
| Mitochondria | 6.89 | 8.91 | 8.41 | 1.92 | -6.64 | 1.73 | 7.24 | 9.01 | 8.27 | -0.54 | 6.89 | 11.77 | 11.44 | 6.26 | -7.10 |
| Mitotic Spindle | -0.74 | -3.67 | -3.69 | -3.49 | 2.79 | -0.85 | -2.98 | -3.53 | -2.62 | 2.49 | -1.11 | -4.63 | -4.33 | -3.84 | 3.56 |
| None | -4.15 | -5.52 | -5.62 | -1.18 | 3.27 | 4.50 | -0.73 | 0.35 | -0.94 | 0.66 | -0.76 | -5.61 | -1.84 | -1.39 | 3.38 |
| Nuclear Periphery | -1.43 | -3.41 | -4.99 | -4.86 | 2.52 | 2.46 | -3.76 | -2.23 | -2.56 | 2.37 | 0.83 | -4.99 | -5.32 | -5.42 | 3.50 |
| Nuclear Periphery Foci | -0.89 | -5.01 | -3.79 | -3.36 | 3.53 | 1.31 | -3.03 | -3.57 | -4.05 | 2.05 | -0.03 | -5.19 | -4.64 | -4.50 | 3.73 |
| Nucleolus | -0.50 | -2.91 | -0.21 | 0.34 | 2.89 | 1.83 | -2.47 | 1.10 | -1.30 | 3.38 | 0.83 | -3.57 | 0.42 | -0.48 | 3.68 |
| Nucleus | 1.31 | -1.37 | -0.78 | -1.07 | -0.44 | 0.38 | -0.45 | -0.43 | -0.94 | 0.01 | 0.98 | -1.28 | -0.81 | -1.06 | -0.51 |
| Peroxisomes | -2.09 | -3.50 | 4.85 | 6.12 | 4.76 | -0.70 | -1.26 | 2.37 | 3.20 | 2.62 | -2.02 | -3.61 | 5.61 | 7.35 | 5.65 |
| Vacuole | 2.09 | -5.49 | -3.38 | -4.90 | 3.34 | 0.58 | -4.86 | -6.48 | -6.60 | -2.61 | 2.17 | -6.95 | -7.13 | -8.16 | 1.46 |
| Vacuole Periphery | 3.27 | -3.20 | -7.31 | -9.21 | 0.14 | 1.95 | -3.54 | -7.39 | -7.86 | -1.89 | 3.59 | -4.75 | -10.25 | -11.89 | -0.32 |
| Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
|---|---|---|---|---|
| 37℃ | ||||
| RT |
| Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
|---|
| Gene | Images |
|---|
| Gene | Images |
|---|