Standard name
Human Ortholog
Description Protein involved in regulation of the mitochondrial F1F0-ATP synthase; Stf1p and Stf2p act as stabilizing factors that enhance inhibitory action of the Inh1p protein; protein abundance increases in response to DNA replication stress; STF1 has a paralog, INH1, that arose from the whole genome duplication

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.12 0.16 0.12 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0.07 0.09 0 0 0 0 0 0
Cytoplasm 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.09 0.07 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0.05 0 0
Golgi 0 0.06 0 0 0 0 0 0 0 0 0 0.06 0.11 0.13 0.64 0.49 0.55 0.05 0.07 0 0.1 0.08 0.1
Mitochondria 0.87 0.86 0.97 0.97 0.88 0.95 0.87 0.93 0.93 0.96 0.95 0.91 0.9 0.85 0.11 0.11 0.07 0.77 0.77 0.84 0.69 0.69 0.65
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0.05 0 0.07 0.09 0.07 0.07 0.05 0.07 0.08 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0.08 0.14 0.18 0.13 0.15 0.11 0.11 0 0 0 0.05 0.06 0.09 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0.08 0 0 0 0 0.07 0 0 0.05 0.06 0.06 0.05
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0.23 0.16 0.07 0 0.05 0 0 0 0 0 0 0.08 0.08 0.08 0.16 0.12 0.11 0 0.05 0 0 0 0.07
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 1 3 3 0 1 0 0 0 0 0 3 0 6 3 14 19 23 9 9 1 4 15 13
Bud 6 1 13 8 4 6 14 11 9 12 21 4 0 2 0 3 5 4 1 0 1 5 6
Bud Neck 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0
Bud Site 2 0 7 0 1 1 2 1 2 7 8 1 0 0 0 0 1
Cell Periphery 13 11 4 9 6 1 0 2 1 1 0 12 9 5 10 8 16 1 0 1 0 0 0
Cytoplasm 6 8 2 7 8 5 13 3 3 5 3 5 5 12 4 10 13 0 2 0 0 1 0
Endoplasmic Reticulum 4 5 2 1 0 2 0 0 2 2 3 2 5 2 3 7 4 2 2 0 0 1 0
Endosome 26 1 0 0 7 0 3 0 0 0 0 9 9 9 0 1 2 48 3 13 11 14 9
Golgi 26 17 1 1 1 0 0 0 0 3 0 22 57 60 76 57 101 47 21 7 23 34 38
Mitochondria 741 245 307 273 338 398 485 426 352 437 524 341 476 404 13 13 13 696 233 261 171 290 243
Nucleus 8 0 1 0 0 1 3 1 0 0 0 0 0 0 0 2 3 0 1 0 0 0 2
Nuclear Periphery 26 12 17 11 27 39 41 30 20 31 42 15 22 4 1 0 2 9 2 2 0 3 4
Nucleolus 33 7 13 11 31 57 102 59 57 49 58 15 16 4 6 7 16 3 2 0 3 6 6
Peroxisomes 12 2 3 3 7 3 3 7 3 5 6 31 23 21 3 4 13 25 4 16 15 26 18
SpindlePole 6 0 6 0 3 1 3 0 2 2 3 5 0 2 2 2 2 5 1 1 2 2 1
Vac/Vac Membrane 200 45 23 6 21 12 17 12 9 9 7 29 40 37 19 14 20 40 16 5 7 16 27
Unique Cell Count 852 285 318 282 382 419 555 456 380 456 549 374 528 475 119 116 185 900 304 313 248 424 376
Labelled Cell Count 1110 357 402 330 455 526 686 552 461 563 678 491 668 565 151 147 234 900 304 313 248 424 376


Mitochondria

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 7.9 11.2 5.5 8.1 11.4 11.3 12.8 12.6 13.3 14.5 14.3 12.8 14.9 15.0 29.4 28.6 27.1 10.1 11.8 12.5
Std Deviation (1e-4) 1.5 2.4 1.2 1.9 2.8 3.3 4.2 4.6 5.1 6.6 5.9 4.8 4.0 4.4 10.0 10.7 9.9 2.9 5.9 5.9
Intensity Change (Log2) 0.56 1.06 1.05 1.23 1.21 1.29 1.41 1.39 1.22 1.44 1.46 2.42 2.39 2.31 0.88 1.12 1.19


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 6.5 5.6
Bud -0.8 -2.6 -2.3 -1.3 -1.3 -1.3 -1.1 -0.2 -2.6 0 -3.7 0 0 -0.8
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 -0.7 -0.8 0 0 0 0 0 0
Cell Periphery 1.6 0 0 0 0 0 0 0 1.7 0 0 0 0 4.1
Cytoplasm 0 0 0 1.9 0 0 0 0 0 0 2.0 0 0 4.1
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 4.1 5.8 6.4 15.5 13.2 14.6
Mitochondria 0.2 -3.9 -1.0 -4.5 -1.9 -2.2 -0.5 -0.8 -2.9 -3.4 -5.2 -18.0 -17.9 -20.1
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery -0.8 0.9 2.0 1.2 0.7 0 0.8 1.3 -0.8 -0.8 -3.9 0 0 -2.4
Nucleolus -0.1 2.2 4.4 6.0 4.2 4.8 3.4 3.4 -0.1 -0.8 -3.1 0.4 0.9 2.1
Peroxisomes 0 0 0 0 0 0 0 0 4.5 2.8 2.8 0 0 3.7
SpindlePole 0 0 0 0 0 0 0 0 -0.6 0 0 0 0 0
Vacuole -2.9 -0.9 -2.8 -2.8 -3.0 -3.1 -3.6 -4.6 0.3 0.2 0.3 2.8 1.6 1.4

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 12.3815 11.0458 10.712 11.0255 10.5009 10.8036 10.447 9.6268 9.9383 8.814 11.7771 10.2185 14.1701 12.1453 12.0996 10.8299 10.4871 12.4432
Actin 0.0031 0.0013 0.0013 0.0002 0.0005 0.001 0.0198 0.0144 0.0138 0.0117 0.0183 0.0029 0.0086 0.0022 0.0135 0.0014 0.0012 0.0006
Bud 0.0001 0.0001 0 0 0 0.0001 0.0003 0.0001 0.0001 0.0003 0.0003 0.0001 0.0001 0.0003 0 0.0004 0.0001 0
Bud Neck 0 0 0 0 0 0 0.0003 0.0001 0.0001 0.0002 0.0003 0.0001 0.0003 0.0001 0.0001 0.0008 0 0
Bud Periphery 0.0002 0.0003 0.0001 0 0 0.0002 0.0004 0.0002 0.0003 0.0006 0.0006 0.0003 0.0002 0.0009 0.0001 0.0005 0.0001 0.0002
Bud Site 0.0002 0.0001 0.0001 0 0 0.0001 0.001 0.0003 0.0003 0.0005 0.0012 0.0001 0.0002 0.0008 0.0001 0.0167 0.0002 0
Cell Periphery 0.0001 0.0001 0.0001 0 0 0 0.0002 0.0001 0.0001 0.0001 0.0003 0.0001 0.0001 0.0008 0.0001 0.0002 0.0001 0.0001
Cytoplasm 0.0001 0 0.0001 0 0 0.0002 0.0009 0.0001 0.0001 0.0001 0.0029 0.0002 0.0016 0 0 0.0004 0.0006 0
Cytoplasmic Foci 0.0018 0.001 0.0021 0.0001 0.0007 0.0007 0.0035 0.0027 0.006 0.0053 0.0045 0.0009 0.0018 0.0011 0.0011 0.012 0.0076 0.0002
Eisosomes 0.0001 0.0001 0.0002 0.0001 0.0001 0.0001 0.0003 0.0002 0.0003 0.0001 0.0007 0.0003 0.0002 0.0002 0.0002 0.0001 0.0003 0.0001
Endoplasmic Reticulum 0 0.0001 0.0001 0 0 0 0.0011 0.0001 0.0001 0.0001 0.0022 0.0002 0.0007 0.0001 0.0001 0.0001 0.0001 0.0025
Endosome 0.0022 0.0061 0.003 0.0013 0.0055 0.0019 0.013 0.0101 0.0091 0.0088 0.0102 0.0116 0.0046 0.0056 0.0058 0.0037 0.0016 0.0016
Golgi 0.0125 0.0169 0.0048 0.0045 0.0542 0.0076 0.0347 0.0272 0.0113 0.0233 0.008 0.0053 0.005 0.0233 0.0169 0.0066 0.0022 0.0051
Lipid Particles 0.005 0.0072 0.0025 0.0003 0.0005 0.0005 0.0074 0.0052 0.0124 0.0028 0.0148 0.002 0.0144 0.0163 0.0024 0.0066 0.0147 0.0017
Mitochondria 0.9642 0.9494 0.9817 0.9922 0.9328 0.984 0.8976 0.9276 0.9263 0.9313 0.866 0.9702 0.9454 0.9277 0.9547 0.936 0.9579 0.9745
None 0 0 0.0001 0 0 0 0.0005 0 0.0001 0 0.0012 0 0.0013 0 0 0.0004 0.0008 0
Nuclear Periphery 0.0001 0.0006 0.0001 0 0 0 0.0015 0 0.0001 0 0.0253 0.0002 0.0014 0.0001 0 0.0001 0.0008 0.0004
Nucleolus 0.0001 0.0001 0 0 0 0 0.0002 0.0001 0.0034 0 0.0014 0.0001 0.0006 0.0003 0 0.0005 0.0038 0
Nucleus 0 0.0001 0 0 0 0 0.0003 0 0.0002 0 0.0085 0.0001 0.0014 0.0001 0 0.0002 0.0009 0
Peroxisomes 0.0044 0.0042 0.0015 0.0007 0.0008 0.0008 0.0088 0.0087 0.0049 0.014 0.0052 0.0019 0.0039 0.0098 0.0024 0.0101 0.0022 0.0093
Punctate Nuclear 0 0 0.0002 0 0 0 0.0005 0 0.0001 0.0001 0.0099 0.0001 0.0012 0 0 0.0008 0.0023 0
Vacuole 0.0011 0.003 0.0004 0.0001 0.0014 0.0003 0.0023 0.0008 0.0022 0.0002 0.0017 0.0013 0.0014 0.0031 0.0005 0.0009 0.0006 0.0005
Vacuole Periphery 0.0045 0.009 0.0016 0.0005 0.0033 0.0022 0.0054 0.002 0.0087 0.0004 0.0166 0.0018 0.0057 0.0072 0.002 0.0017 0.0019 0.0033

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 61.3002 15.1169 8.413 42.539 32.8876 29.5768 34.3905 30.9483 38.3676 47.874
Translational Efficiency 2.0706 3.6754 6.7647 2.5775 2.4825 6.2912 2.1754 3.3652 4.3091 2.5074

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
39 690 1649 1377 2082 1453 116 1281 2121 2143 1765 2658

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1083.65 942.77 2049.93 1450.02 788.99 966.86 2841.29 1490.20 794.41 959.10 2101.94 1469.38
Standard Deviation 229.17 162.61 465.72 424.80 429.15 172.45 976.57 430.89 428.15 169.72 551.15 428.21
Intensity Change Log 2 -0.200921 0.919676 0.420174 0.293300 1.848467 0.917427 0.028220 1.385121 0.650851

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.001353 0.001760 0.002476 0.007157 0.001318 0.001381 0.046632 0.005454 0.001318 0.001503 0.005378 0.006336
Bud Neck 0.000943 0.001345 0.002814 0.002821 0.001570 0.001579 0.022158 0.001679 0.001558 0.001504 0.004085 0.002271
Bud Site 0.000461 0.003772 0.001989 0.008597 0.005122 0.004167 0.005064 0.003639 0.005036 0.004040 0.002191 0.006207
Cell Periphery 0.000046 0.000148 0.000106 0.000476 0.000455 0.000232 0.001785 0.000217 0.000447 0.000205 0.000216 0.000351
Cytoplasm 0.000333 0.000675 0.000223 0.001374 0.004257 0.000684 0.000266 0.000545 0.004185 0.000681 0.000226 0.000975
Cytoplasmic Foci 0.017890 0.024654 0.029471 0.015898 0.005455 0.012803 0.026849 0.008983 0.005684 0.016619 0.029299 0.012565
Eisosomes 0.000328 0.000082 0.000546 0.000416 0.000051 0.000066 0.003073 0.000276 0.000056 0.000071 0.000712 0.000348
Endoplasmic Reticulum 0.000221 0.000219 0.000116 0.000506 0.000305 0.000149 0.010421 0.000293 0.000303 0.000172 0.000794 0.000403
Endosome 0.002252 0.026923 0.002036 0.011391 0.011561 0.024709 0.026428 0.007404 0.011389 0.025422 0.003639 0.009469
Golgi 0.006721 0.029082 0.019936 0.043641 0.007625 0.019263 0.167811* 0.034322 0.007609 0.022425 0.029655 0.039149
Lipid Particles 0.002636 0.008276 0.010509 0.008761 0.002291 0.005323 0.098486 0.001921 0.002297 0.006274 0.016291 0.005464
Mitochondria 0.935209* 0.855972* 0.864934* 0.848008* 0.928323* 0.900116* 0.448528* 0.901843* 0.928450* 0.885902* 0.837566* 0.873953*
Mitotic Spindle 0.000942 0.009892 0.005459 0.005010 0.001575 0.002032 0.012461 0.004299 0.001563 0.004563 0.005920 0.004668
None 0.001022 0.000307 0.004601 0.002405 0.002057 0.000305 0.004923 0.001307 0.002038 0.000305 0.004622 0.001876
Nuclear Periphery 0.000255 0.000106 0.003691 0.001551 0.000033 0.000156 0.014223 0.000303 0.000037 0.000140 0.004383 0.000949
Nuclear Periphery Foci 0.006932 0.000245 0.001391 0.000613 0.000088 0.000223 0.005207 0.000215 0.000214 0.000230 0.001642 0.000421
Nucleolus 0.001328 0.000924 0.002443 0.000557 0.000358 0.000193 0.000506 0.000327 0.000376 0.000429 0.002316 0.000446
Nucleus 0.000165 0.000304 0.000155 0.000456 0.002194 0.000127 0.000200 0.000099 0.002156 0.000184 0.000158 0.000284
Peroxisomes 0.010139 0.024350 0.004470 0.005885 0.021415 0.014402 0.001304 0.006407 0.021208 0.017605 0.004262 0.006136
Vacuole 0.006833 0.005553 0.013685 0.011136 0.002245 0.006706 0.036938 0.008036 0.002329 0.006335 0.015214 0.009642
Vacuole Periphery 0.003991 0.005412 0.028948 0.023342 0.001706 0.005382 0.066736 0.012432 0.001748 0.005392 0.031431 0.018084

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -0.73 -2.07 -4.95 -4.63 -4.04 -0.10 -4.04 -3.90 -3.67 3.66 -0.36 -4.42 -6.07 -5.86 -0.85
Bud Neck -0.79 -3.95 -3.20 -2.96 -0.02 -0.02 -5.30 -0.33 -0.35 5.28 0.11 -5.13 -1.77 -2.38 4.09
Bud Site -2.61 -1.74 -4.87 -2.60 -4.15 0.70 0.04 1.08 0.36 1.03 0.79 2.57 -0.99 -2.00 -4.11
Cell Periphery -4.13 -3.34 -6.10 -4.52 -5.27 2.87 -2.96 3.18 0.36 3.53 3.30 2.98 1.18 -3.37 -2.72
Cytoplasm -0.26 0.73 -1.56 -2.12 -3.44 3.57 4.06 3.76 0.57 -2.40 3.61 4.12 3.23 -1.42 -4.14
Cytoplasmic Foci -0.59 -1.05 0.22 2.91 5.65 -5.35 -5.33 -2.92 2.61 4.42 -7.80 -11.62 -5.98 2.81 8.17
Eisosomes 1.64 -1.49 -0.60 -7.35 2.81 -1.49 -5.39 -8.15 -7.45 4.99 -1.30 -13.84 -11.93 -10.85 6.93
Endoplasmic Reticulum 0.47 1.07 -1.05 -3.75 -5.45 1.03 -3.00 0.08 -2.55 3.01 0.89 -1.79 -0.63 -4.90 1.68
Endosome -6.95 0.58 -3.33 5.34 -7.70 -5.46 -2.15 2.72 7.35 2.75 -6.97 6.29 1.40 8.62 -6.17
Golgi -6.27 -4.75 -9.50 -3.52 -6.79 -6.47 -8.74 -8.73 -4.46 7.20 -9.25 -9.97 -13.78 -6.49 -3.17
Lipid Particles -2.01 -4.48 -3.15 -0.20 1.23 -2.93 -5.43 0.64 3.36 5.45 -3.85 -8.80 -4.16 0.73 6.58
Mitochondria 2.02 1.80 2.31 0.66 1.95 3.86 14.15 3.59 -0.17 -13.28 6.27 12.03 8.47 1.80 -4.75
Mitotic Spindle -3.82 -3.95 -3.26 2.00 0.32 -0.80 -2.51 -2.40 -2.03 1.83 -3.50 -4.39 -3.71 -0.09 1.05
None 4.21 -12.89 -6.29 -13.78 8.12 2.86 -3.42 1.23 -11.50 6.38 2.88 -4.00 0.29 -17.30 11.90
Nuclear Periphery 1.82 -6.41 -5.38 -6.47 3.74 -3.95 -5.40 -7.02 -3.06 5.30 -4.56 -8.27 -7.75 -6.79 6.38
Nuclear Periphery Foci 1.04 0.95 1.01 -4.25 3.79 -2.87 -4.68 -3.23 0.14 4.56 0.41 -4.41 -0.42 -3.58 6.12
Nucleolus 0.30 -0.97 0.67 0.71 5.12 1.12 -0.87 0.20 -1.55 1.70 -0.24 -5.76 -0.40 -0.08 5.85
Nucleus -0.85 0.36 -0.84 -0.48 -0.96 3.34 3.22 3.37 0.44 1.88 3.24 3.29 2.95 -0.63 -0.80
Peroxisomes -2.26 0.98 0.72 6.10 -1.39 2.62 9.55 6.56 4.04 -4.70 1.43 8.13 7.08 7.03 -2.28
Vacuole 0.66 -0.55 -0.18 -3.91 1.82 -5.00 -5.29 -4.71 -1.04 4.35 -4.99 -11.41 -8.02 -3.51 4.44
Vacuole Periphery -0.52 -7.82 -5.97 -8.80 2.18 -5.01 -7.47 -7.69 -4.54 6.16 -6.28 -16.73 -13.71 -9.77 6.28
Standard name
Human Ortholog
Description Protein involved in regulation of the mitochondrial F1F0-ATP synthase; Stf1p and Stf2p act as stabilizing factors that enhance inhibitory action of the Inh1p protein; protein abundance increases in response to DNA replication stress; STF1 has a paralog, INH1, that arose from the whole genome duplication
Localization
Cell Percentages mitochondrion (97%)
Cell Cycle Regulation No
Subcompartmental Group mito-2

Stf1

Stf1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Stf1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available