Standard name
Human Ortholog
Description Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA genes at the nucleolus; may influence multiple aspects of chromosome transmission
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0 0 0 0 0 0 0 0.05 0.06 0 0 0.12 0.12 0 0.11 0.08 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0
Endosome 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0.05 0.07 0.06 0.09 0.09 0.05 0.08 0.09 0.18 0.22 0.22
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.05 0.18 0 0.09 0.07 0.23 0.27 0.15 0.46 0.55 0.56 0.26 0.14 0 0 0.05 0 0.08 0 0 0 0 0 0
Nucleus 0.69 0.6 0.68 0.58 0.53 0.56 0.6 0.57 0.54 0.5 0.44 0.57 0.69 0.55 0.48 0.5 0.41 0.47 0.5 0.44 0.39 0.12 0.13 0.14
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0.07 0 0 0 0 0 0
Nucleolus 0.29 0.27 0.14 0.26 0.25 0.21 0.21 0.2 0.22 0.17 0.19 0.2 0.23 0.3 0.38 0.36 0.38 0.35 0.22 0.27 0.23 0.24 0.13 0.11
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0.06 0.06 0.17 0.21 0.23 0.12 0.12 0.15 0.06 0.06 0 0.09 0 0 0 0.09 0.06 0.11 0.13 0.11 0.15 0.27 0.22 0.2
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0.07 0.06 0 0 0.05 0.07 0.11 0.14 0.13
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 2
Bud 0 0 5 5 4 7 11 6 14 12 15 9 1 0 0 0 2 0 0 0 4 3 3 8
Bud Neck 0 0 3 5 5 4 5 6 2 4 3 1 0 0 0 0 0 0 0 0 3 1 2 5
Bud Site 2 0 2 6 4 9 15 6 17 13 13 16 0 0 1 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 5 7 12 15 15 17 14 20 10 19 21 14 11 37 45 8 9 11 0 0 1 0 2 3
Endoplasmic Reticulum 0 0 0 0 1 0 1 0 0 0 0 0 0 1 3 0 1 6 0 0 0 0 3 3
Endosome 6 10 13 16 14 11 12 10 7 3 0 23 4 17 28 13 8 12 8 17 40 30 60 75
Golgi 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 3
Mitochondria 8 37 8 35 25 93 126 69 222 226 203 151 35 10 9 10 3 10 1 3 6 2 12 7
Nucleus 104 125 269 216 196 231 280 263 258 207 159 336 178 177 182 108 35 61 83 100 180 21 35 48
Nuclear Periphery 3 1 6 7 4 12 5 3 7 7 3 2 2 5 7 7 6 9 4 2 9 2 6 10
Nucleolus 44 56 56 96 93 86 97 90 106 69 67 121 60 96 141 77 32 46 37 60 106 42 36 36
Peroxisomes 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 1 0 1 2
SpindlePole 9 12 68 78 85 51 55 67 29 26 9 51 4 8 13 20 5 14 21 23 69 47 60 68
Vac/Vac Membrane 3 4 6 1 12 12 11 12 16 9 7 29 2 4 9 14 5 5 4 11 31 18 37 45
Unique Cell Count 150 207 394 372 372 413 470 459 481 410 362 591 259 321 376 214 85 131 168 226 466 174 272 339
Labelled Cell Count 184 252 448 481 459 533 632 553 688 595 502 753 299 357 438 258 106 174 168 226 466 174 272 339


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 6.0 5.5 6.1 5.6 6.0 5.0 5.1 5.2 4.5 4.3 4.0 5.0 5.4 5.8 5.6 8.5 9.2 8.3 5.5 5.4 5.3
Std Deviation (1e-4) 1.1 0.9 0.9 1.1 1.2 1.0 1.1 1.0 1.1 1.0 0.9 1.0 1.0 1.6 1.3 1.8 2.3 2.0 1.6 1.7 1.3
Intensity Change (Log2) – – – -0.14 -0.03 -0.31 -0.26 -0.23 -0.44 -0.52 -0.62 -0.3 -0.19 -0.08 -0.14 0.48 0.58 0.43 -0.17 -0.2 -0.2

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP7000510WT3HU80HU120HU1600510WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30510WT1AF100AF140AF1800510
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0.5 1.2 0 0 0 0 0.3 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 2.0 2.8 0 0 0 0 2.5 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.7 0.7 0.8 -0.1 1.0 -0.9 1.2 1.9 -0.6 0.8 4.5 4.7 0.5 0 2.6
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0.7 0.3 -0.5 -0.7 -1.0 0 0 0 0.5 -1.4 1.3 2.6 1.6 0 2.7
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 4.4 3.2 8.8 10.0 6.6 0 0 0 9.8 5.8 0.9 0.3 1.8 0 0
Nucleus -2.9 -4.4 -3.6 -2.6 -3.3 -4.4 -5.1 -6.7 -3.6 0.1 -3.6 -5.6 -4.3 -4.7 -4.5
Nuclear Periphery 0.4 0 1.3 -0.6 0 0 0 0 0 0 0 0.4 0 0 0
Nucleolus 4.0 3.8 2.5 2.5 2.1 0 0 0 2.5 2.9 5.1 7.4 6.2 5.1 5.2
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 1.3 1.9 -2.0 -2.3 -1.1 0 0 0 -4.1 -6.3 -6.4 -6.2 -2.6 -2.6 -1.8
Vacuole 0 1.6 1.3 0.9 1.1 1.7 0.7 0.4 2.8 0 0 0.9 3.3 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 0.7762 0.6399 0.6372 1.0216 0.3117 0.6334 1.5838 1.1754 1.315 1.6791 1.3164 1.3053 1.3387 1.0008 1.0546 1.7847 0.876 0.8336
Actin 0.0026 0.0001 0.0001 0 0.0002 0.0001 0.0216 0.0001 0.0119 0.0461 0.0266 0.0009 0.0112 0.0073 0.0011 0.0462 0.0087 0.008
Bud 0 0.0003 0.0017 0 0 0 0.0004 0 0.0002 0.0003 0.0004 0.0001 0.0003 0.0001 0.0001 0.0007 0.0001 0.0001
Bud Neck 0.0011 0.0006 0.0006 0.0007 0.0038 0.0018 0.0052 0.0007 0.002 0.0098 0.0051 0.0021 0.0035 0.0006 0.0016 0.0045 0.002 0.0016
Bud Periphery 0.0001 0.0003 0.0002 0.0001 0.0001 0.0001 0.0013 0.0001 0.0003 0.0005 0.002 0.0006 0.0006 0.0002 0.0002 0.0011 0.0001 0.0002
Bud Site 0.0002 0.0006 0.0003 0.0002 0.0002 0.0001 0.0049 0.0005 0.0018 0.0032 0.0008 0.0003 0.0018 0.0012 0.0008 0.0019 0.0003 0.0002
Cell Periphery 0.0001 0 0 0 0 0 0.0002 0 0.0001 0.0002 0.0004 0.0001 0.0001 0 0.0001 0.0002 0.0001 0
Cytoplasm 0.0035 0.0042 0.0016 0.0002 0.0003 0.0002 0.0021 0.0056 0.0007 0.0002 0.0044 0.0002 0.0065 0.0031 0.0008 0.0006 0.0013 0.0003
Cytoplasmic Foci 0.0009 0.0003 0.0007 0.0002 0.0017 0.0001 0.0096 0.0003 0.003 0.003 0.0024 0.0003 0.006 0.0004 0.003 0.0098 0.0058 0.0005
Eisosomes 0 0 0 0 0 0 0.0002 0 0.0001 0.0006 0.0003 0 0.0002 0 0.0001 0.0002 0.0002 0.0002
Endoplasmic Reticulum 0.002 0.0003 0.0002 0 0 0 0.0016 0.0002 0.0005 0.0002 0.0026 0.0005 0.0021 0.0004 0.0002 0.0007 0.0022 0.0002
Endosome 0.0021 0.0007 0.0027 0.0001 0.0006 0.0002 0.009 0.0003 0.004 0.0029 0.0128 0.0031 0.016 0.0006 0.0021 0.0198 0.016 0.0014
Golgi 0.0003 0 0.0002 0.0001 0.0002 0 0.0042 0.0001 0.0016 0.0051 0.006 0.0013 0.0032 0.0005 0.0007 0.0155 0.0028 0.0012
Lipid Particles 0.001 0.0002 0.0057 0.0003 0.0011 0.0003 0.0136 0.0006 0.0049 0.007 0.0049 0.0017 0.0109 0.0003 0.0076 0.0126 0.0106 0.0035
Mitochondria 0.0003 0.0002 0.0002 0.0001 0.0002 0.0001 0.0035 0.0004 0.0009 0.0025 0.0462 0.0082 0.0027 0.0006 0.0009 0.0074 0.0015 0.0035
None 0.0042 0.0038 0.0019 0.0002 0.0003 0.0002 0.001 0.0015 0.0006 0.0003 0.0021 0.0002 0.0057 0.0098 0.0016 0.0005 0.0049 0.0004
Nuclear Periphery 0.0337 0.0154 0.0314 0.0006 0.0026 0.013 0.0422 0.0293 0.0346 0.0018 0.0112 0.0105 0.0429 0.0281 0.022 0.0059 0.0246 0.0158
Nucleolus 0.1149 0.1418 0.3102 0.3514 0.3945 0.217 0.1363 0.2111 0.3223 0.4546 0.4271 0.216 0.1585 0.1584 0.2892 0.403 0.1936 0.2076
Nucleus 0.7488 0.7183 0.5498 0.3801 0.1461 0.6585 0.6465 0.625 0.499 0.2199 0.1765 0.6625 0.6057 0.6354 0.4652 0.222 0.2201 0.6359
Peroxisomes 0.0001 0 0.0001 0 0.0002 0 0.0066 0 0.001 0.0021 0.0009 0.0002 0.0048 0.0002 0.003 0.0069 0.0016 0.0006
Punctate Nuclear 0.0836 0.1117 0.091 0.2654 0.4475 0.108 0.0866 0.1232 0.1083 0.2391 0.2597 0.0889 0.1138 0.1518 0.1986 0.2359 0.5016 0.1183
Vacuole 0.0003 0.0008 0.0009 0.0001 0.0002 0.0002 0.0019 0.0004 0.0016 0.0004 0.003 0.0011 0.0019 0.0005 0.0006 0.0032 0.0006 0.0003
Vacuole Periphery 0.0003 0.0003 0.0006 0 0.0001 0.0002 0.0014 0.0006 0.0007 0.0002 0.0045 0.001 0.0015 0.0005 0.0004 0.0012 0.0014 0.0004

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 4.628 6.9678 8.0787 8.0968 7.5794 4.8688 11.6685 11.5903 8.4545 9.9972
Translational Efficiency 3.0411 2.2678 1.1362 1.0239 1.1133 2.3164 1.164 0.9031 1.0948 0.9578

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✔
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
643 1148 751 570 744 1445 421 1013 1387 2593 1172 1583

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 675.90 755.07 979.96 997.32 778.09 717.93 901.10 942.63 730.72 734.37 951.63 962.32
Standard Deviation 77.98 117.90 140.25 132.69 90.50 106.96 137.41 143.45 99.04 113.44 144.29 142.12
Intensity Change Log 2 — 0.159801 0.535913 0.561247 — -0.116094 0.211750 0.276755 — 0.018740 0.371529 0.416002

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000300 0.001127 0.001297 0.002157 0.000332 0.000548 0.000908 0.001827 0.000317 0.000804 0.001157 0.001946
Bud Neck 0.002583 0.004966 0.011911 0.026652 0.001786 0.006433 0.009106 0.024570 0.002155 0.005783 0.010903 0.025319
Bud Site 0.001286 0.001714 0.003356 0.014923 0.000336 0.001177 0.001467 0.015888 0.000776 0.001415 0.002677 0.015541
Cell Periphery 0.000128 0.000129 0.000089 0.000133 0.000048 0.000113 0.000097 0.000139 0.000085 0.000120 0.000092 0.000137
Cytoplasm 0.016739 0.009686 0.004478 0.011162 0.004805 0.010497 0.009194 0.029356 0.010337 0.010138 0.006172 0.022805
Cytoplasmic Foci 0.008342 0.006324 0.000659 0.013971 0.001560 0.004962 0.000612 0.008274 0.004704 0.005565 0.000642 0.010325
Eisosomes 0.000063 0.000065 0.000057 0.000042 0.000053 0.000054 0.000046 0.000053 0.000057 0.000059 0.000053 0.000049
Endoplasmic Reticulum 0.001617 0.005507 0.006928 0.004562 0.001940 0.003241 0.004271 0.005958 0.001790 0.004244 0.005973 0.005455
Endosome 0.001419 0.003922 0.000641 0.011879 0.000470 0.003365 0.000706 0.011781 0.000910 0.003612 0.000664 0.011816
Golgi 0.001142 0.003764 0.000317 0.016225 0.000980 0.002254 0.000373 0.009593 0.001055 0.002922 0.000337 0.011981
Lipid Particles 0.002080 0.004255 0.000730 0.001142 0.001728 0.002877 0.000530 0.002400 0.001891 0.003487 0.000658 0.001947
Mitochondria 0.002108 0.007267 0.001410 0.008491 0.003446 0.009081 0.001439 0.010920 0.002825 0.008278 0.001421 0.010045
Mitotic Spindle 0.015379 0.033829 0.026399 0.479725 0.017855 0.032915 0.044677 0.299051 0.016707 0.033320 0.032965 0.364107
None 0.023487 0.013259 0.004847 0.004348 0.007111 0.016644 0.019172 0.008041 0.014703 0.015146 0.009993 0.006711
Nuclear Periphery 0.001491 0.002676 0.000854 0.003983 0.001457 0.003128 0.000952 0.003738 0.001473 0.002928 0.000889 0.003827
Nuclear Periphery Foci 0.031804 0.035728 0.004547 0.006274 0.039213 0.026431 0.003019 0.010269 0.035779 0.030547 0.003998 0.008831
Nucleolus 0.447166 0.272109 0.137031 0.131558 0.401199 0.315605 0.191428 0.161002 0.422509 0.296348 0.156571 0.150400
Nucleus 0.438470 0.585731 0.789464 0.229069 0.512850 0.554306 0.708361 0.365995 0.478368 0.568219 0.760331 0.316691
Peroxisomes 0.003555 0.005165 0.001307 0.001411 0.002399 0.003211 0.000978 0.003627 0.002935 0.004076 0.001189 0.002829
Vacuole 0.000637 0.001858 0.003393 0.024632 0.000303 0.002439 0.002415 0.020713 0.000458 0.002182 0.003042 0.022124
Vacuole Periphery 0.000205 0.000921 0.000287 0.007663 0.000132 0.000719 0.000247 0.006807 0.000166 0.000808 0.000273 0.007115

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -7.65 -14.63 -8.59 -5.36 -3.47 -4.55 -9.55 -16.34 -13.58 -4.07 -8.87 -17.38 -15.77 -10.88 -4.59
Bud Neck -4.85 -12.36 -13.64 -12.84 -8.13 -7.15 -10.56 -19.53 -16.26 -8.96 -8.58 -16.27 -23.29 -20.70 -11.91
Bud Site -0.72 -3.19 -8.53 -8.31 -6.23 -3.56 -7.73 -11.53 -10.38 -8.14 -2.27 -5.20 -13.86 -13.06 -8.82
Cell Periphery 0.08 1.78 -0.35 -0.49 -3.15 -3.89 -3.74 -7.35 0.29 -1.50 -2.33 -0.64 -3.06 0.11 -2.87
Cytoplasm 2.16 4.47 2.34 0.16 -3.99 -3.05 -0.73 -4.85 -2.79 -4.12 -0.14 3.13 -2.30 -2.59 -5.84
Cytoplasmic Foci 1.93 4.64 3.39 2.61 -2.29 -2.29 2.56 0.62 3.34 -3.04 0.59 5.23 3.46 4.38 -3.72
Eisosomes 0.89 1.24 -0.17 -0.86 -1.13 0.40 -0.44 -1.05 -1.54 -0.46 1.00 0.15 -0.47 -1.42 -0.59
Endoplasmic Reticulum -10.91 -14.50 -10.15 -5.18 -2.51 -4.66 -7.94 -11.27 -8.23 -2.25 -11.17 -16.14 -15.25 -8.93 -2.30
Endosome -2.19 1.75 -3.25 -0.55 -4.96 -3.90 -2.99 -4.44 -0.61 -3.92 -4.19 0.78 -5.14 -0.75 -5.78
Golgi -3.07 4.61 -1.76 0.22 -2.91 -1.61 1.24 -1.52 -0.38 -2.58 -3.21 3.02 -2.22 0.01 -3.83
Lipid Particles -2.26 4.05 2.13 3.55 -2.74 -1.66 4.29 1.94 3.05 -1.74 -2.77 5.63 2.87 4.68 -2.29
Mitochondria -4.18 0.99 -5.22 1.21 -6.08 -2.92 1.08 -1.90 1.65 -5.63 -4.60 1.24 -3.57 1.95 -7.66
Mitotic Spindle -2.96 -1.99 -18.48 -17.33 -17.56 -2.29 -4.30 -18.55 -17.51 -11.89 -3.68 -4.31 -26.00 -24.38 -22.09
None 3.42 6.72 6.25 5.69 -1.80 -4.58 -1.72 0.94 6.21 2.21 0.09 4.22 5.90 8.23 0.95
Nuclear Periphery -3.94 0.48 -8.54 -6.47 -9.03 -4.36 -0.49 -9.06 -3.68 -8.90 -5.83 0.22 -12.39 -7.21 -13.12
Nuclear Periphery Foci 0.76 7.29 6.19 7.16 -2.24 2.72 7.95 7.08 7.09 -2.41 2.56 10.60 9.51 10.21 -2.62
Nucleolus 12.38 19.57 17.92 8.15 -0.42 5.96 10.05 17.36 13.90 3.37 12.67 21.88 25.08 15.72 1.36
Nucleus -10.56 -20.36 3.79 14.02 23.11 -2.76 -7.03 2.77 6.10 9.45 -9.06 -19.75 3.65 13.13 23.18
Peroxisomes -0.48 2.40 2.82 4.38 1.90 -1.01 2.35 1.52 2.83 -1.27 -0.88 3.10 3.11 5.07 0.16
Vacuole -2.78 -6.38 -8.47 -8.11 -7.21 -3.00 -4.62 -9.40 -8.11 -6.77 -3.96 -8.12 -12.56 -11.50 -9.91
Vacuole Periphery -4.13 -5.40 -3.25 -1.79 -2.89 -6.16 -6.39 -2.97 -2.08 -2.69 -6.82 -8.62 -4.04 -2.60 -3.60
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA genes at the nucleolus; may influence multiple aspects of chromosome transmission
Localization
Cell Percentages nucleus (36%), nucleolus (18%), mixed (33%)
Cell Cycle Regulation Yes
nucleolus - MA (0.00012)
nucleus - T/G1 (0.0003)
Subcompartmental Group N/A

Brn1

Brn1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Brn1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available