Standard name | |
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Human Ortholog | |
Description | Membrane-associated mitochondrial ribosome receptor; forms a complex with Mdm38p that may facilitate recruitment of mRNA-specific translational activators to ribosomes; possible role in protein export from the matrix to inner membrane |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 3 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 4 | 3 | 7 |
Bud | 4 | 0 | 8 | 5 | 6 | 16 | 13 | 10 | – | 10 | 16 | 17 | 1 | 1 | 2 | – | 2 | 2 | 1 | 1 | 0 | 1 | 3 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 1 | 0 | 2 | 4 | 4 | 12 | – | 6 | 5 | 6 | 0 | 0 | 0 | – | 1 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 5 | 3 | 5 | 1 | 5 | 7 | 0 | – | 1 | 5 | 3 | 1 | 6 | 6 | – | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 2 | 0 | 5 | 4 | 4 | 5 | 2 | – | 1 | 1 | 2 | 0 | 6 | 5 | – | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 1 | 1 | 0 | 0 | 1 | 1 | 2 | 3 | – | 5 | 5 | 3 | 3 | 1 | 2 | – | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 3 |
Endosome | 1 | 4 | 7 | 4 | 8 | 0 | 5 | 4 | – | 5 | 2 | 0 | 4 | 8 | 6 | – | 1 | 0 | 1 | 3 | 10 | 0 | 6 | 7 |
Golgi | 4 | 11 | 0 | 0 | 4 | 0 | 0 | 0 | – | 0 | 0 | 1 | 10 | 47 | 56 | – | 4 | 2 | 5 | 11 | 3 | 8 | 22 | 23 |
Mitochondria | 125 | 116 | 282 | 302 | 423 | 387 | 633 | 429 | – | 583 | 523 | 544 | 92 | 138 | 101 | – | 2 | 0 | 128 | 121 | 254 | 76 | 131 | 136 |
Nucleus | 3 | 0 | 3 | 0 | 2 | 7 | 6 | 5 | – | 3 | 1 | 3 | 1 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 5 | 7 | 15 | 13 | 23 | 38 | 69 | 32 | – | 71 | 61 | 74 | 3 | 5 | 1 | – | 4 | 0 | 0 | 0 | 2 | 0 | 2 | 0 |
Nucleolus | 14 | 4 | 13 | 10 | 21 | 37 | 75 | 65 | – | 48 | 43 | 39 | 5 | 2 | 3 | – | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
Peroxisomes | 1 | 3 | 4 | 4 | 3 | 1 | 3 | 6 | – | 4 | 1 | 0 | 2 | 4 | 3 | – | 1 | 5 | 2 | 1 | 10 | 8 | 7 | 16 |
SpindlePole | 1 | 0 | 1 | 0 | 1 | 3 | 6 | 5 | – | 11 | 5 | 1 | 2 | 2 | 1 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 6 | 29 | 15 | 9 | 34 | 17 | 25 | 21 | – | 27 | 21 | 15 | 14 | 53 | 42 | – | 6 | 8 | 2 | 10 | 2 | 4 | 10 | 15 |
Unique Cell Count | 135 | 140 | 290 | 308 | 447 | 406 | 675 | 469 | 619 | 536 | 566 | 102 | 196 | 166 | 22 | 16 | 151 | 156 | 289 | 108 | 192 | 218 | ||
Labelled Cell Count | 170 | 183 | 353 | 357 | 533 | 520 | 854 | 594 | 775 | 689 | 708 | 141 | 273 | 228 | 30 | 20 | 151 | 156 | 289 | 108 | 192 | 218 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.0 | 9.1 | 5.9 | 6.0 | 5.9 | 5.7 | 5.3 | 5.6 | – | 5.5 | 5.5 | 5.6 | 7.7 | 8.1 | 8.4 | – | 11.2 | 12.5 | 9.9 | 9.7 | 10.0 |
Std Deviation (1e-4) | 2.1 | 2.0 | 1.1 | 1.2 | 1.3 | 1.0 | 1.2 | 1.3 | – | 1.2 | 1.5 | 1.4 | 1.3 | 1.5 | 1.3 | – | 2.5 | 4.0 | 1.9 | 2.4 | 2.1 |
Intensity Change (Log2) | – | – | – | 0.02 | -0.01 | -0.06 | -0.16 | -0.08 | – | -0.09 | -0.1 | -0.08 | 0.4 | 0.47 | 0.52 | – | 0.93 | 1.08 | 0.75 | 0.72 | 0.77 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Bud | -1.0 | -1.4 | 0.8 | -0.8 | -0.6 | – | -1.2 | 0.2 | 0.2 | 0 | 0 | 0 | – | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Endosome | -1.0 | -0.6 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1.0 | 0 | – | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 8.8 | 10.6 | – | 0 | 0 |
Mitochondria | 0.7 | -1.7 | -1.3 | -2.2 | -3.2 | – | -2.0 | 0.3 | -0.8 | -2.9 | -8.5 | -10.2 | – | -13.9 | -14.1 |
Nucleus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Nuclear Periphery | -0.6 | 0 | 2.1 | 2.6 | 0.9 | – | 3.0 | 2.9 | 3.6 | 0 | -1.4 | -2.6 | – | 0 | 0 |
Nucleolus | -0.8 | 0.1 | 2.3 | 3.3 | 4.1 | – | 1.8 | 1.9 | 1.4 | 0 | -2.2 | -1.5 | – | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Vacuole | -1.4 | 1.3 | -0.6 | -1.0 | -0.4 | – | -0.5 | -0.8 | -1.9 | 2.8 | 6.8 | 6.3 | – | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.025 | 4.0261 | 4.163 | 4.2545 | 3.4034 | 4.2535 | 7.0589 | 7.1622 | 7.1725 | 6.7677 | 6.8518 | 7.1286 | 4.2254 | 4.5527 | 3.9131 | 4.0669 | 3.3267 | 3.9886 |
Actin | 0.01 | 0.0039 | 0.0035 | 0.0042 | 0.0047 | 0.0028 | 0.0035 | 0.0048 | 0.0039 | 0.0084 | 0.0003 | 0.0009 | 0.0168 | 0.0016 | 0.0108 | 0.0023 | 0.0004 | 0.0004 |
Bud | 0.0002 | 0.0002 | 0.0004 | 0.0027 | 0.0008 | 0.0009 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0 |
Bud Neck | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0002 | 0 | 0 | 0.0001 |
Bud Periphery | 0.0004 | 0.0004 | 0.0009 | 0.0195 | 0.002 | 0.0021 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0002 | 0.0003 | 0.0001 | 0.0003 | 0.0001 |
Bud Site | 0.0006 | 0.0004 | 0.0011 | 0.0002 | 0.0007 | 0.0011 | 0.0002 | 0.0169 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.001 | 0.0007 | 0.0004 | 0.0001 | 0 | 0.0001 |
Cell Periphery | 0.0002 | 0.0001 | 0.0018 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0.0012 | 0 | 0 | 0 |
Cytoplasmic Foci | 0.0074 | 0.0061 | 0.0062 | 0.0017 | 0.0096 | 0.0021 | 0.0027 | 0.0034 | 0.0017 | 0.0016 | 0.0004 | 0.0008 | 0.0102 | 0.007 | 0.0034 | 0.0024 | 0.0001 | 0.0019 |
Eisosomes | 0.0004 | 0.0001 | 0.0006 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0005 | 0.0001 | 0.0001 | 0.0001 |
Endoplasmic Reticulum | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0.0004 | 0.0002 | 0.0005 | 0 | 0.0005 | 0.0001 |
Endosome | 0.015 | 0.0145 | 0.0063 | 0.0062 | 0.0261 | 0.0049 | 0.0083 | 0.0081 | 0.0068 | 0.0019 | 0.0022 | 0.0022 | 0.019 | 0.0156 | 0.0114 | 0.0027 | 0.0018 | 0.0085 |
Golgi | 0.0287 | 0.0484 | 0.0081 | 0.0042 | 0.066 | 0.0195 | 0.0155 | 0.0208 | 0.0116 | 0.0094 | 0.0031 | 0.0081 | 0.0292 | 0.0391 | 0.0161 | 0.0088 | 0.0027 | 0.0207 |
Lipid Particles | 0.023 | 0.0147 | 0.0089 | 0.0011 | 0.0037 | 0.0085 | 0.0151 | 0.0213 | 0.0013 | 0.0015 | 0.0035 | 0.0009 | 0.0218 | 0.0121 | 0.0095 | 0.0255 | 0.0007 | 0.0069 |
Mitochondria | 0.8884 | 0.8813 | 0.9415 | 0.9293 | 0.8606 | 0.9467 | 0.9345 | 0.9063 | 0.9638 | 0.9439 | 0.9767 | 0.9799 | 0.8703 | 0.8972 | 0.9323 | 0.949 | 0.9911 | 0.9495 |
None | 0.0004 | 0 | 0.0007 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0004 | 0 | 0 | 0 | 0.0002 | 0 | 0.0004 | 0 | 0 | 0 |
Nuclear Periphery | 0.0005 | 0 | 0.0003 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0004 | 0 | 0 | 0 | 0.0008 | 0.0001 | 0.0009 | 0 | 0.0001 | 0.0001 |
Nucleolus | 0.0002 | 0.0044 | 0.0002 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 |
Nucleus | 0.0001 | 0.0003 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0003 | 0 | 0 | 0.0001 |
Peroxisomes | 0.0173 | 0.021 | 0.0104 | 0.0247 | 0.0148 | 0.0056 | 0.0161 | 0.0159 | 0.0065 | 0.0323 | 0.0079 | 0.0055 | 0.02 | 0.0211 | 0.0072 | 0.0078 | 0.0007 | 0.005 |
Punctate Nuclear | 0.0006 | 0.0001 | 0.0027 | 0 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0 | 0.0003 | 0 | 0.001 | 0 | 0 | 0 |
Vacuole | 0.0015 | 0.0016 | 0.0029 | 0.0013 | 0.003 | 0.0011 | 0.0009 | 0.0004 | 0.0008 | 0.0001 | 0.0009 | 0.0003 | 0.0022 | 0.0012 | 0.0011 | 0.0002 | 0.0002 | 0.002 |
Vacuole Periphery | 0.0042 | 0.002 | 0.0026 | 0.0043 | 0.0068 | 0.0035 | 0.0019 | 0.0009 | 0.0013 | 0.0003 | 0.0044 | 0.001 | 0.0057 | 0.0032 | 0.0022 | 0.0005 | 0.0011 | 0.0039 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 23.07 | 11.7847 | 12.2426 | 16.6403 | 15.3829 | 9.2229 | 23.2351 | 26.1369 | 21.6193 | 22.4978 |
Translational Efficiency | 0.9836 | 1.5035 | 1.3014 | 0.8956 | 1.169 | 2.8433 | 0.9537 | 0.8507 | 1.2032 | 1.3245 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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