Standard name
Human Ortholog
Description Ubiquitin chain assembly factor (E4); cooperates with a ubiquitin-activating enzyme (E1), a ubiquitin-conjugating enzyme (E2), and a ubiquitin protein ligase (E3) to conjugate ubiquitin to substrates; also functions as an E3
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.8 0.9 0.74 0.82 0.68 0.68 0.59 0.54 0.48 – 0.48 0.4 0.68 0.69 0.55 0.72 0.6 0.69 0.72 0.62 0.77 0.66 0.54 0.44
Endoplasmic Reticulum 0.1 0 0.06 0.06 0.06 0.08 0 0 0 – 0 0 0 0 0 0 0 0 0.09 0 0.09 0.06 0 0.12
Endosome 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0.05 0 0.06 0.11 0.12 0.25 – 0.33 0.35 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0.05 0.05 – 0.05 0.05 0 0 0 0.05 0 0 0.05 0.15 0 0.13 0.15 0.14
Nuclear Periphery 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0.19 0.15 0.26 0.13 0.36 0.25 0.36 0.37 0.34 – 0.22 0.38 0.32 0.41 0.53 0.37 0.52 0.41 0 0.09 0.05 0.08 0.12 0.1
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 – 2 0 0 0 0 1 0 0 1 0 1 0 2 1
Bud 0 0 1 1 1 1 2 1 4 – 1 5 0 0 1 0 0 0 1 1 1 0 8 8
Bud Neck 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 1 1 1 0 2 3
Bud Site 0 0 0 0 0 0 0 0 1 – 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 1 1 1 4 5 5 6 – 11 8 0 0 0 4 5 4 0 0 0 0 0 0
Cytoplasm 176 122 184 177 233 245 247 261 190 – 161 161 95 158 128 279 170 220 175 94 217 98 114 93
Endoplasmic Reticulum 23 2 14 12 20 27 15 8 5 – 8 5 2 4 1 8 8 5 21 3 24 8 7 24
Endosome 1 1 0 0 1 0 0 1 0 – 0 0 0 0 0 1 2 1 2 2 2 2 4 8
Golgi 0 0 1 0 0 0 0 0 0 – 0 0 0 0 0 2 3 1 4 0 0 0 1 2
Mitochondria 0 0 0 10 6 23 46 60 97 – 112 142 5 1 1 6 1 2 1 1 1 0 0 1
Nucleus 3 1 1 4 2 5 14 22 21 – 18 20 2 3 9 20 11 14 11 22 11 19 31 29
Nuclear Periphery 0 0 0 1 1 0 3 1 0 – 2 5 1 1 0 0 0 0 10 5 3 1 4 5
Nucleolus 0 0 1 0 0 0 0 0 1 – 0 0 1 1 0 0 0 0 0 0 0 0 1 1
Peroxisomes 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 1 1 0 0 1 6
Vac/Vac Membrane 43 21 64 29 123 90 152 182 134 – 74 152 44 94 123 144 149 131 8 13 14 11 26 22
Unique Cell Count 221 136 249 217 345 358 422 487 394 338 402 139 228 234 390 284 319 245 153 283 150 214 213
Labelled Cell Count 246 147 267 235 388 395 484 541 459 389 498 150 262 263 465 349 378 245 153 283 150 214 213


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 11.3 9.8 8.1 7.8 9.0 8.7 8.0 7.8 7.5 – 7.1 6.9 9.2 10.1 9.0 10.5 11.8 12.3 9.6 9.5 10.6
Std Deviation (1e-4) 1.6 1.5 1.0 1.4 1.3 1.9 1.5 1.3 1.6 – 1.6 1.5 1.9 1.8 1.6 1.8 2.5 2.0 1.3 1.9 1.9
Intensity Change (Log2) – – – -0.06 0.15 0.09 -0.02 -0.07 -0.11 – -0.19 -0.23 0.18 0.32 0.15 0.36 0.54 0.6 0.23 0.22 0.38


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 – 2.4 0 0 0 0 0 0 0
Cytoplasm 2.0 -1.7 -1.5 -4.0 -5.3 -6.4 – -6.4 -8.4 -1.2 -1.1 -4.4 -0.7 -3.4 -1.3
Endoplasmic Reticulum 0 0.1 0.9 -1.3 -3.0 -3.2 – -2.1 -3.2 -2.0 -2.2 -3.3 -2.4 -1.6 -2.7
Endosome 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Mitochondria 0 0 4.1 5.4 5.8 8.5 – 10.1 10.6 0 0 0 0 0 0
Nucleus 0 0 0 2.5 3.0 3.3 – 3.3 3.2 0 0 0 3.3 2.7 2.9
Nuclear Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0
Vacuole -3.3 2.6 -0.2 2.8 3.2 2.2 – -1.1 3.2 1.3 3.6 6.1 3.0 6.3 3.8

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 8.5379 10.3779 9.085 9.2464 9.0338 9.6827 8.7196 11.323 9.8615 9.7725 8.3976 9.9727 9.4204 10.187 10.0102 9.1006 9.6949 9.7116
Actin 0.0274 0.0005 0.0034 0.0007 0.0002 0.0032 0.0215 0.0002 0.0075 0.0064 0.0331 0.0068 0.0189 0.0006 0.0059 0.0006 0.0004 0.0002
Bud 0.0007 0.0002 0.0005 0.001 0.0001 0.0001 0.0004 0.0002 0.0002 0.0006 0.0002 0.0002 0.0001 0.0001 0.0002 0.0001 0.0001 0.0001
Bud Neck 0.0012 0.0033 0.0016 0.0043 0.0017 0.0026 0.0015 0.0005 0.0011 0.0007 0.0011 0.0021 0.0006 0.0007 0.0004 0.0007 0.0008 0.002
Bud Periphery 0.0011 0.0003 0.0006 0.0036 0.0001 0.0001 0.0004 0 0.0001 0.0008 0.0002 0.0003 0.0001 0.0001 0.0003 0 0 0
Bud Site 0.0027 0.0033 0.0017 0.0007 0.0001 0.0001 0.0013 0.0029 0.0015 0.0023 0.0004 0.0003 0.0008 0.0006 0.0004 0.0001 0.0001 0
Cell Periphery 0.0003 0.0002 0.0002 0.0007 0.0002 0 0.0001 0 0.0001 0.0001 0.0001 0.0001 0.0001 0 0 0 0.0001 0
Cytoplasm 0.1416 0.342 0.2095 0.2285 0.2982 0.1665 0.2566 0.4188 0.2998 0.2296 0.2722 0.2116 0.1646 0.3432 0.2962 0.3359 0.3685 0.2385
Cytoplasmic Foci 0.0196 0.0004 0.0061 0.0036 0.0005 0.0006 0.0147 0.0006 0.0065 0.0028 0.0118 0.0053 0.0005 0.0005 0.0012 0.0009 0.0013 0.0003
Eisosomes 0.0002 0 0.0001 0 0 0 0.0001 0 0.0001 0.0001 0.0003 0.0001 0.0008 0 0 0 0 0
Endoplasmic Reticulum 0.0153 0.0043 0.0188 0.0098 0.0126 0.0047 0.0141 0.0054 0.0078 0.0029 0.0058 0.0058 0.0057 0.0117 0.0041 0.0283 0.036 0.0068
Endosome 0.0582 0.0007 0.0224 0.02 0.0093 0.0027 0.0306 0.0008 0.0051 0.0194 0.0156 0.0139 0.0011 0.0012 0.0037 0.0024 0.0066 0.0011
Golgi 0.0149 0.0002 0.0047 0.0039 0.0009 0.0022 0.0041 0 0.0021 0.01 0.0111 0.0058 0.0007 0 0.0007 0 0.0001 0
Lipid Particles 0.0114 0.0001 0.0083 0.0295 0.003 0.0009 0.0044 0 0.0039 0.0022 0.0442 0.0053 0.0007 0 0.0007 0 0.0002 0
Mitochondria 0.026 0.0005 0.0101 0.0044 0.0164 0.0091 0.0031 0.0002 0.0024 0.0135 0.0104 0.0017 0.001 0.0003 0.0007 0.0003 0.0003 0.0002
None 0.0034 0.0003 0.0009 0.0006 0.0004 0.0002 0.0019 0.0007 0.0022 0.0006 0.0015 0.0008 0.0008 0.0009 0.002 0.0006 0.001 0.0004
Nuclear Periphery 0.1193 0.0674 0.0763 0.0698 0.0571 0.0585 0.0795 0.0389 0.0546 0.0447 0.0377 0.0546 0.1139 0.0897 0.0693 0.0879 0.0666 0.0703
Nucleolus 0.0009 0.0004 0.001 0.0022 0.0005 0.0005 0.001 0.0002 0.0005 0.0003 0.0007 0.0004 0.0002 0.0003 0.0003 0.0001 0.0002 0.0003
Nucleus 0.5291 0.5723 0.6229 0.583 0.5809 0.7426 0.5441 0.5253 0.5937 0.6557 0.513 0.6771 0.685 0.5446 0.6087 0.5351 0.51 0.675
Peroxisomes 0.0037 0.0001 0.0017 0.0008 0.0002 0.0006 0.0031 0 0.0043 0.0011 0.0136 0.0014 0.0012 0 0.0006 0 0 0
Punctate Nuclear 0.0082 0.0015 0.0029 0.003 0.0014 0.002 0.0092 0.0041 0.0047 0.0032 0.0242 0.0044 0.002 0.004 0.003 0.0039 0.0031 0.0031
Vacuole 0.01 0.0018 0.0049 0.0246 0.0119 0.0021 0.0065 0.0007 0.0012 0.0019 0.0018 0.0013 0.0008 0.0011 0.001 0.0023 0.0041 0.0013
Vacuole Periphery 0.0048 0.0003 0.0015 0.0054 0.0041 0.0006 0.002 0.0002 0.0006 0.0011 0.001 0.0006 0.0004 0.0003 0.0004 0.0006 0.0006 0.0004

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 39.38 30.4184 28.4049 39.3983 28.2553 37.0655 37.2355 40.117 41.8207 38.7221
Translational Efficiency 0.876 0.9776 1.0168 0.7992 0.8514 0.8592 0.8493 0.7715 0.7425 0.7886

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1236 644 282 1185 1554 1904 282 177 2790 2548 564 1362

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 806.22 994.80 1453.07 1204.00 875.40 1042.44 1430.69 1344.25 844.75 1030.40 1441.88 1222.23
Standard Deviation 94.99 148.00 158.07 166.43 145.36 141.04 163.10 189.55 130.18 144.33 161.00 176.05
Intensity Change Log 2 — 0.303233 0.849859 0.578590 — 0.251950 0.708697 0.618787 — 0.276764 0.778099 0.599655

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000180 0.000402 0.001208 0.001095 0.000247 0.000233 0.001237 0.000637 0.000217 0.000276 0.001223 0.001036
Bud Neck 0.003046 0.001545 0.014237 0.008063 0.001254 0.002131 0.012222 0.005782 0.002048 0.001983 0.013230 0.007767
Bud Site 0.002702 0.004021 0.003822 0.014430 0.001380 0.004597 0.003464 0.023282 0.001965 0.004452 0.003643 0.015580
Cell Periphery 0.000214 0.000134 0.000358 0.000286 0.000132 0.000100 0.000427 0.000337 0.000168 0.000108 0.000393 0.000292
Cytoplasm 0.535180* 0.602743* 0.145074* 0.432912* 0.504978* 0.583971* 0.152422* 0.332689* 0.518358* 0.588716* 0.148748* 0.419887*
Cytoplasmic Foci 0.197721* 0.060911 0.006823 0.016482 0.049045 0.081116 0.002970 0.059092 0.114910 0.076009 0.004896 0.022019
Eisosomes 0.000128 0.000028 0.000031 0.000036 0.000031 0.000033 0.000032 0.000044 0.000074 0.000032 0.000031 0.000037
Endoplasmic Reticulum 0.036291 0.028992 0.047543 0.007749 0.067439 0.036080 0.049203 0.004086 0.053640 0.034288 0.048373 0.007273
Endosome 0.017341 0.008918 0.012437 0.005069 0.006817 0.010281 0.008261 0.003167 0.011479 0.009937 0.010349 0.004822
Golgi 0.002629 0.000441 0.000391 0.001327 0.000564 0.001576 0.000233 0.000366 0.001478 0.001289 0.000312 0.001202
Lipid Particles 0.030021 0.007721 0.005002 0.003510 0.012357 0.009697 0.005231 0.003755 0.020182 0.009197 0.005117 0.003541
Mitochondria 0.002172 0.000441 0.002499 0.001908 0.002327 0.001531 0.001918 0.001513 0.002259 0.001255 0.002208 0.001857
Mitotic Spindle 0.001498 0.004520 0.018501 0.061709 0.002115 0.008130 0.004674 0.142204* 0.001841 0.007218 0.011588 0.072170
None 0.003504 0.003163 0.001923 0.006483 0.005444 0.002131 0.003731 0.013188 0.004585 0.002392 0.002827 0.007354
Nuclear Periphery 0.003353 0.010419 0.132598* 0.004362 0.038432 0.013915 0.049649 0.002445 0.022891 0.013031 0.091124 0.004113
Nuclear Periphery Foci 0.010000 0.059163 0.094318 0.014911 0.066269 0.029778 0.068330 0.009728 0.041341 0.037205 0.081324 0.014238
Nucleolus 0.001270 0.000654 0.002411 0.000524 0.002232 0.000838 0.000832 0.000225 0.001805 0.000792 0.001622 0.000485
Nucleus 0.085851 0.133141* 0.399628* 0.278121* 0.205158* 0.138870* 0.528109* 0.133783* 0.152304* 0.137422* 0.463868* 0.259363*
Peroxisomes 0.001338 0.000490 0.000278 0.001305 0.000529 0.000840 0.000177 0.004206 0.000887 0.000752 0.000227 0.001682
Vacuole 0.064364 0.071365 0.110206 0.133687 0.032381 0.073358 0.106499 0.257682* 0.046550 0.072854 0.108352 0.149801
Vacuole Periphery 0.001199 0.000788 0.000712 0.006033 0.000870 0.000793 0.000379 0.001789 0.001016 0.000792 0.000545 0.005481

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -3.69 -10.95 -9.36 -7.16 4.31 0.06 -11.77 -6.15 -5.92 5.89 -2.00 -16.13 -11.25 -10.09 6.26
Bud Neck 3.52 -10.36 -9.56 -12.92 6.88 -4.68 -9.50 -8.90 -7.29 5.35 -0.40 -14.13 -14.06 -13.81 8.34
Bud Site -0.91 -4.36 -7.58 -4.31 -4.37 -3.97 -7.19 -6.50 -4.08 -3.75 -3.48 -8.27 -10.39 -5.87 -5.48
Cell Periphery 6.90 -6.39 -4.50 -9.77 4.34 4.40 -10.04 -5.32 -6.20 2.83 9.56 -11.86 -9.27 -14.43 6.53
Cytoplasm -4.20 34.47 21.99 21.52 -15.76 -7.51 34.89 14.78 19.14 -5.24 -8.26 48.47 25.40 32.49 -19.72
Cytoplasmic Foci 22.06 37.24 37.59 12.65 -3.17 -9.82 22.33 7.33 13.76 -3.38 10.89 37.69 34.89 27.88 -6.82
Eisosomes 15.02 12.64 12.25 -8.19 -2.23 -0.81 -4.34 -4.85 -4.52 -1.35 12.64 7.91 7.43 -8.79 -1.67
Endoplasmic Reticulum 2.29 -0.42 9.88 7.91 10.58 8.27 6.82 18.86 13.54 8.36 7.22 5.38 20.51 14.86 12.80
Endosome 7.58 3.47 16.29 7.51 10.90 -5.21 -1.55 8.09 10.84 5.99 2.44 1.23 17.95 13.59 12.05
Golgi 5.52 5.53 5.51 0.48 0.46 -2.16 5.32 7.16 3.10 3.60 0.71 6.28 5.65 2.65 0.02
Lipid Particles 13.37 14.41 16.73 5.13 3.82 3.15 7.13 7.35 4.79 0.03 12.03 15.63 19.40 10.01 4.03
Mitochondria 2.15 -0.39 1.28 -5.00 7.03 0.92 0.13 2.21 1.47 8.67 1.55 -0.19 2.12 0.32 8.49
Mitotic Spindle -1.86 -4.81 -8.55 -7.37 -1.31 -3.92 -3.34 -3.86 -3.35 -3.33 -4.39 -5.63 -9.38 -7.52 -4.22
None 1.05 4.03 -4.14 -4.77 -8.58 4.39 2.97 -0.91 -3.53 -2.72 4.51 4.52 -2.30 -7.12 -7.42
Nuclear Periphery -5.12 -9.20 -3.14 3.84 9.01 9.39 0.59 13.87 8.13 6.93 6.12 -7.20 12.49 8.69 10.83
Nuclear Periphery Foci -10.58 -7.62 -0.20 10.56 7.59 9.44 2.93 14.20 7.48 4.99 1.61 -2.84 14.51 14.12 9.05
Nucleolus 2.63 -1.46 4.38 2.37 2.59 3.78 3.66 6.09 2.70 5.69 4.11 0.29 7.00 2.48 3.33
Nucleus -8.16 -18.89 -29.37 -18.57 6.30 10.83 -17.67 1.90 -2.42 15.45 3.14 -24.67 -18.39 -20.96 13.56
Peroxisomes 5.88 7.31 4.56 0.53 -0.38 -2.78 5.74 0.23 1.36 -0.88 1.01 8.92 3.08 2.24 -0.93
Vacuole -3.70 -8.97 -26.14 -20.64 -8.63 -14.27 -11.04 -17.61 -15.64 -10.85 -12.13 -14.43 -32.52 -27.23 -12.11
Vacuole Periphery 2.82 5.72 -0.01 -0.67 -0.79 0.71 6.14 3.40 2.62 0.50 2.36 7.99 -0.12 -0.54 -0.97
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Ubiquitin chain assembly factor (E4); cooperates with a ubiquitin-activating enzyme (E1), a ubiquitin-conjugating enzyme (E2), and a ubiquitin protein ligase (E3) to conjugate ubiquitin to substrates; also functions as an E3
Localization
Cell Percentages cytoplasm (31%), ER (24%), mixed (41%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Ufd2

Ufd2


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Ufd2-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available