Standard name
Human Ortholog
Description Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 – 0 0 0 0.06 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0 0 0 0.05 0 – 0 0 0.05 0 0 0.09 0.15 0.06 0.07 0.07 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.15 0.23 0.05 0.07 0 0.45 0.06 – 0.3 0.23 0.3 0.28 0 0 0 0.09 0.07 0.08 0 0 0 0 0 0
Nucleus 0.88 0.79 0.92 0.89 0.89 0.78 0.87 – 0.78 0.82 0.72 0.82 0.93 0.88 0.81 0.86 0.84 0.8 0.72 0.74 0.63 0.65 0.65 0.61
Nuclear Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.07 0 0 0 0 0 0 – 0.07 0.09 0.13 0.18 0 0 0 0 0 0 0.12 0.11 0.14 0.21 0.19 0.2
Peroxisomes 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0.07 0.06 0 0 0 – 0 0 0 0 0 0 0 0.05 0.06 0.05 0 0 0.06 0 0.05 0.05
Vac/Vac Membrane 0 0.06 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0.05 0.09 0.1 0.07 0.07 0.07
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 1 1 1 4 – 4 6 1 0 0 1 0 3 0 1 1 0 0 0 4 4
Bud Neck 0 0 0 0 0 1 0 – 1 3 0 0 1 0 0 0 0 0 0 0 0 1 2 3
Bud Site 0 0 0 1 0 8 1 – 8 10 5 10 0 0 0 1 0 1 – – – – – –
Cell Periphery 1 0 0 0 0 0 0 – 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0
Cytoplasm 3 1 3 12 20 16 24 – 14 12 14 4 18 59 114 22 20 20 0 0 0 0 2 2
Endoplasmic Reticulum 0 0 0 0 0 0 0 – 0 0 0 0 0 0 2 4 4 8 0 0 0 0 1 0
Endosome 2 2 0 6 8 2 9 – 2 1 1 0 1 2 11 9 8 12 7 1 1 2 11 6
Golgi 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 1 1 1 1 0 1 1 1 0
Mitochondria 27 23 4 21 16 156 31 – 106 100 79 48 13 11 2 33 19 23 1 1 1 2 3 7
Nucleus 157 79 78 259 397 270 487 – 273 349 189 141 458 571 624 302 237 222 148 89 78 166 422 377
Nuclear Periphery 1 0 0 0 3 1 6 – 3 4 3 0 0 2 2 1 1 3 2 0 0 0 1 3
Nucleolus 12 3 0 3 12 8 20 – 26 40 34 31 17 9 23 5 4 5 23 12 17 52 120 126
Peroxisomes 0 0 0 0 0 0 1 – 0 0 0 0 0 2 3 0 1 3 0 0 0 0 0 1
SpindlePole 3 1 6 16 12 12 23 – 4 7 5 2 11 15 8 17 18 14 4 3 7 8 31 32
Vac/Vac Membrane 3 6 0 2 9 2 6 – 3 1 0 1 1 0 6 11 12 5 10 10 12 16 45 44
Unique Cell Count 179 100 85 290 447 347 559 348 428 263 172 495 647 771 352 282 278 205 121 125 256 651 618
Labelled Cell Count 209 115 91 321 478 477 612 444 533 331 237 520 673 795 409 326 318 205 121 125 256 651 618


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 5.0 4.8 5.0 5.4 6.1 4.4 5.3 – 4.9 5.0 5.3 4.9 5.5 5.2 5.9 6.2 6.6 6.4 4.8 5.2 5.3
Std Deviation (1e-4) 0.7 0.7 1.0 1.3 1.6 1.5 1.2 – 1.5 1.3 1.7 1.1 0.9 1.1 1.4 1.1 1.1 1.4 1.1 1.1 1.3
Intensity Change (Log2) – – – 0.11 0.3 -0.19 0.1 – -0.01 0.01 0.1 -0.04 0.15 0.07 0.23 0.31 0.4 0.35 -0.05 0.05 0.08

WT3RAP60RAP140RAP220RAP300RAP460RAP540RAP620RAP7000246WT3HU80HU120HU1600246WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30246WT1AF100AF140AF1800246
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – – – –
Bud Neck – – – – – – – – – – – – – – –
Bud Site – – – – – – – – – – – – – – –
Cell Periphery – – – – – – – – – – – – – – –
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – – – –
Endosome – – – – – – – – – – – – – – –
Golgi – – – – – – – – – – – – – – –
Mitochondria – – – – – – – – – – – – – – –
Nuclear Periphery – – – – – – – – – – – – – – –
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – – – –
Peroxisomes – – – – – – – – – – – – – – –
SpindlePole – – – – – – – – – – – – – – –
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – – – –
Cytoplasm – – – – – – – – – – – – – – –
Nucleus – – – – – – – – – – – – – – –
Vacuole – – – – – – – – – – – – – – –

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 0.7005 0.5678 0.6904 0.1538 0.1304 0.6981 1.2033 1.5089 1.19 0.9254 1.255 1.2037 3.4576 3.576 3.2529 3.085 3.2848 3.2457
Actin 0.0003 0.0001 0.0005 0.0001 0.0001 0.0002 0.0002 0.0002 0 0 0 0 0.0253 0 0.0118 0.0001 0.0014 0
Bud 0.0001 0 0 0.0006 0 0.0004 0.0001 0 0 0 0 0 0.0005 0 0.0001 0.0001 0 0
Bud Neck 0.0003 0.0002 0.0003 0.0003 0.0008 0.0019 0.001 0.0001 0.0001 0.0001 0.0002 0.001 0.0064 0.0002 0.0026 0.0079 0.0014 0.001
Bud Periphery 0.0002 0 0 0.0002 0 0.0002 0.0001 0 0 0 0 0 0.0026 0 0.0001 0.0004 0 0
Bud Site 0.0002 0.0001 0.0002 0.0003 0.0001 0.0002 0.0007 0.0001 0 0 0 0 0.0021 0.0001 0.0018 0.0004 0.0001 0.0001
Cell Periphery 0 0 0 0.0001 0 0 0.0001 0 0 0 0 0 0.0027 0 0 0.0004 0 0
Cytoplasm 0.0006 0.0008 0.0046 0.0261 0.0001 0.0029 0.0014 0.0017 0.0002 0.0001 0.0002 0 0.0022 0.0001 0.0002 0.0002 0.001 0.0001
Cytoplasmic Foci 0.0008 0 0.0007 0.0079 0 0.0024 0.0022 0.0002 0 0 0 0 0.0081 0 0.0006 0 0.0045 0
Eisosomes 0 0 0 0 0 0 0.0001 0 0 0 0 0 0.0007 0 0.0001 0 0 0
Endoplasmic Reticulum 0.0003 0 0.0008 0.0002 0 0.0004 0.0002 0.0001 0.0001 0 0 0 0.0027 0 0.0002 0.0001 0.0001 0
Endosome 0.003 0.0001 0.0015 0.0252 0 0.0013 0.0035 0.0002 0.0001 0 0 0 0.0089 0 0.0009 0.0001 0.0028 0
Golgi 0.0008 0 0.0001 0.0031 0 0.0002 0.0002 0 0 0 0 0 0.0043 0 0.0009 0 0.0012 0
Lipid Particles 0.0034 0 0.0002 0.0132 0 0.0002 0.0005 0.0001 0 0 0 0 0.0044 0 0.0006 0 0.0126 0
Mitochondria 0.0051 0.0002 0.0002 0.0027 0.0004 0.0002 0.0005 0.0001 0.0001 0.0001 0.0001 0 0.0017 0.0001 0.0002 0.0003 0.0004 0.0001
None 0.0002 0.0005 0.0017 0.0041 0.0001 0.0003 0.0013 0.0081 0 0.0001 0.0001 0 0.0018 0 0.0006 0 0.0011 0.0001
Nuclear Periphery 0.0066 0.0045 0.0067 0.0013 0.0028 0.0016 0.0014 0.0016 0.0043 0.0014 0.0009 0.0001 0.0119 0.0003 0.0013 0.0021 0.0027 0.0007
Nucleolus 0.0209 0.0353 0.035 0.0167 0.0931 0.0775 0.0321 0.0332 0.0229 0.0195 0.0833 0.0765 0.0341 0.0404 0.032 0.0277 0.0664 0.0605
Nucleus 0.9397 0.9544 0.9322 0.8365 0.8993 0.8795 0.9462 0.9518 0.9703 0.9775 0.8905 0.9154 0.838 0.9557 0.9438 0.9568 0.879 0.9338
Peroxisomes 0.0018 0 0 0.0012 0 0 0.0003 0 0 0 0 0 0.007 0 0.0004 0 0.0142 0
Punctate Nuclear 0.014 0.0036 0.015 0.0557 0.003 0.0301 0.0076 0.0023 0.0017 0.001 0.0244 0.0068 0.0317 0.0031 0.0015 0.0029 0.0109 0.0036
Vacuole 0.0012 0.0001 0.0002 0.0029 0.0001 0.0003 0.0004 0.0001 0.0001 0 0 0 0.0022 0 0.0001 0.0006 0.0001 0
Vacuole Periphery 0.0007 0.0001 0.0001 0.0015 0.0001 0.0001 0.0002 0 0 0 0 0 0.0007 0 0.0001 0.0001 0.0001 0

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 28.126 29.0111 22.9626 24.5884 19.6359 30.2728 18.0887 25.7372 22.7355 27.3758
Translational Efficiency 0.3661 0.3402 0.3736 0.2052 0.5262 0.3172 0.3981 0.3013 0.4935 0.4466

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1712 1411 140 172 1008 2161 1315 1457 2720 3572 1455 1629

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 645.37 746.99 1034.23 887.70 680.79 785.92 863.80 754.37 658.50 770.54 880.20 768.45
Standard Deviation 86.41 113.30 129.88 118.65 90.70 94.80 132.83 104.78 89.67 104.26 141.75 113.95
Intensity Change Log 2 — 0.210962 0.680359 0.459946 — 0.207173 0.343487 0.148062 — 0.209018 0.517248 0.308261

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000287 0.001213 0.002595 0.001566 0.000350 0.000344 0.001502 0.001003 0.000310 0.000687 0.001607 0.001063
Bud Neck 0.003229 0.011485 0.011597 0.020039 0.002451 0.006879 0.011531 0.017918 0.002941 0.008698 0.011538 0.018142
Bud Site 0.001253 0.005827 0.002454 0.009855 0.000639 0.001580 0.001778 0.003766 0.001026 0.003258 0.001843 0.004409
Cell Periphery 0.000171 0.000185 0.000105 0.000185 0.000123 0.000108 0.000087 0.000138 0.000153 0.000138 0.000089 0.000143
Cytoplasm 0.039039 0.035279 0.004684 0.035441 0.019423 0.012405 0.005864 0.015857 0.031769 0.021441 0.005751 0.017925
Cytoplasmic Foci 0.012898 0.010003 0.000137 0.003725 0.005018 0.003139 0.000197 0.001225 0.009978 0.005850 0.000191 0.001489
Eisosomes 0.000042 0.000053 0.000064 0.000057 0.000036 0.000028 0.000033 0.000037 0.000040 0.000038 0.000036 0.000039
Endoplasmic Reticulum 0.002433 0.005226 0.011549 0.012654 0.002152 0.002070 0.007058 0.005961 0.002329 0.003317 0.007491 0.006668
Endosome 0.001002 0.002837 0.000618 0.005923 0.000774 0.001123 0.000603 0.001726 0.000918 0.001800 0.000604 0.002169
Golgi 0.001650 0.002643 0.000228 0.001421 0.000580 0.001497 0.000197 0.001385 0.001254 0.001950 0.000200 0.001388
Lipid Particles 0.003997 0.002535 0.000621 0.000867 0.001752 0.001424 0.000390 0.000625 0.003165 0.001863 0.000412 0.000650
Mitochondria 0.008237 0.011718 0.002001 0.001987 0.002889 0.005478 0.002416 0.003763 0.006255 0.007943 0.002376 0.003575
Mitotic Spindle 0.002597 0.007420 0.001352 0.007467 0.000921 0.005267 0.003326 0.011832 0.001976 0.006118 0.003136 0.011371
None 0.052119 0.028018 0.006828 0.014547 0.021410 0.013143 0.004766 0.009698 0.040739 0.019019 0.004964 0.010210
Nuclear Periphery 0.001284 0.001005 0.000815 0.001630 0.000501 0.000860 0.000803 0.001542 0.000994 0.000917 0.000805 0.001552
Nuclear Periphery Foci 0.001999 0.002996 0.000721 0.000974 0.001124 0.000831 0.001029 0.002765 0.001675 0.001686 0.000999 0.002576
Nucleolus 0.075044 0.076644 0.022786 0.007072 0.070122 0.065795 0.024656 0.049492 0.073220 0.070080 0.024476 0.045013
Nucleus 0.788400 0.784193 0.924394 0.856639 0.866766 0.873932 0.928745 0.865046 0.817442 0.838484 0.928327 0.864159
Peroxisomes 0.002443 0.003725 0.000714 0.000739 0.001375 0.001685 0.000484 0.000588 0.002047 0.002491 0.000506 0.000604
Vacuole 0.001156 0.004523 0.005466 0.016479 0.001177 0.001357 0.004213 0.003818 0.001164 0.002607 0.004333 0.005155
Vacuole Periphery 0.000719 0.002471 0.000269 0.000732 0.000417 0.001056 0.000321 0.001815 0.000607 0.001615 0.000316 0.001701

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -5.25 -9.60 -7.79 -3.65 2.82 0.26 -17.36 -11.11 -11.38 6.07 -4.92 -21.69 -15.18 -6.42 6.43
Bud Neck -9.36 -6.68 -5.94 -3.74 -2.06 -8.27 -14.42 -15.81 -11.99 -4.29 -11.94 -15.21 -16.63 -11.52 -4.71
Bud Site -4.85 -5.52 -3.94 -1.58 -2.36 -3.05 -6.78 -6.31 -4.44 -3.65 -5.24 -6.09 -6.68 -2.74 -4.26
Cell Periphery -0.65 1.55 -0.35 0.17 -1.56 0.46 1.35 -0.26 -1.06 -3.40 0.84 4.50 0.90 0.04 -3.69
Cytoplasm 1.29 11.79 1.10 0.42 -4.00 2.72 5.86 1.53 -1.56 -6.21 4.93 14.35 6.50 2.01 -7.31
Cytoplasmic Foci 2.46 9.89 7.21 5.37 -1.82 2.66 5.44 4.47 4.15 -4.01 4.98 11.28 9.90 8.04 -4.41
Eisosomes -2.95 -3.57 -5.30 -4.09 -0.02 3.45 1.40 -1.32 -6.17 -3.63 1.89 1.16 -2.17 -3.91 -3.08
Endoplasmic Reticulum -7.95 -8.69 -9.67 -7.56 -1.55 0.44 -14.79 -11.80 -13.55 1.99 -5.18 -17.75 -15.07 -12.10 0.94
Endosome -3.94 -0.15 -1.59 -0.34 -1.55 -0.68 1.18 -1.79 -1.22 -3.00 -3.19 2.33 -2.28 0.08 -3.39
Golgi -1.59 4.46 2.27 3.57 -0.81 -1.76 3.10 -0.84 0.66 -1.96 -1.44 5.52 0.84 1.83 -2.04
Lipid Particles 2.88 6.42 6.62 3.90 -0.37 1.65 5.75 4.62 4.25 -2.27 4.31 10.11 8.88 6.41 -2.34
Mitochondria -1.98 4.79 5.62 6.94 0.71 -2.47 0.42 -0.52 2.30 -1.24 -1.66 4.52 3.23 5.38 -1.17
Mitotic Spindle -3.37 -1.48 -3.14 -2.16 -2.23 -3.36 -3.27 -5.69 -3.58 -3.64 -4.22 -2.75 -5.92 -3.77 -4.12
None 6.84 14.14 10.59 5.00 -2.08 3.91 8.97 6.29 3.28 -4.66 9.74 18.21 14.90 7.36 -5.11
Nuclear Periphery 0.89 -0.26 -3.61 -5.11 -3.94 -3.68 -6.56 -6.34 -4.46 -3.06 0.38 -0.85 -3.50 -5.31 -3.92
Nuclear Periphery Foci -1.15 0.50 -0.30 0.71 -0.64 1.22 0.42 -1.89 -2.81 -2.31 0.56 2.21 -1.16 -1.48 -2.40
Nucleolus 0.04 10.02 19.70 19.65 2.61 0.86 10.44 3.45 3.19 -7.69 1.25 16.33 7.05 6.43 -7.06
Nucleus -0.26 -9.81 -2.81 -2.63 3.99 -1.41 -7.97 1.34 3.15 10.64 -4.34 -18.58 -5.44 -1.76 11.39
Peroxisomes -1.28 4.95 5.57 5.19 1.29 0.02 3.87 3.39 4.14 -2.42 -0.25 7.39 6.86 6.74 -1.93
Vacuole -5.15 -3.03 -4.66 -4.11 -2.56 -0.28 -3.06 -5.02 -5.09 -1.06 -3.88 -4.15 -7.10 -5.54 -2.33
Vacuole Periphery -3.71 2.37 1.22 4.27 -0.82 -1.76 0.98 -2.09 -0.67 -2.33 -3.45 2.50 -1.67 0.52 -2.35
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions
Localization
Cell Percentages nucleus (92%)
Cell Cycle Regulation No
Subcompartmental Group nucleus-3

Snf11

Snf11


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Snf11-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available