Standard name
Human Ortholog
Description Protein involved in nucleotide excision repair (NER); homologous to RAD4
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0.07 0 0.05 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.14 0.2 0.42 0.39 0.39 0.36 0.38 0.41 0.29 0.36 0.34 0.34 0.17 0.26 0.29 0.36 0.34 0.35 0.09 0.12 0.14 0.09 0.09 0.1
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0.05 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0.05 0.17 0.09 0.11 0 0 0 0 0.05 0.06
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.46 0.42 0 0.2 0.11 0.35 0.41 0.26 0.65 0.51 0.59 0.52 0.32 0.12 0.11 0.07 0 0.08 0.05 0 0 0.05 0.09 0.1
Nucleus 0.34 0.38 0.45 0.35 0.39 0.33 0.24 0.22 0.21 0.22 0.15 0.18 0.51 0.46 0.39 0.17 0.21 0.2 0.32 0.42 0.28 0.25 0.13 0.1
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0.1 0.05 0 0.06 0.06 0 0 0 0.05 0 0 0 0 0 0 0.1 0.06 0.05 0.05 0.09 0.1
Vac/Vac Membrane 0.31 0.16 0 0 0.09 0.06 0 0.11 0 0 0.05 0.05 0.13 0.14 0.23 0.41 0.42 0.39 0.31 0.26 0.38 0.42 0.43 0.41
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 2
Bud 0 0 0 1 3 2 8 3 9 8 13 23 5 1 1 0 0 0 1 3 4 6 13 11
Bud Neck 0 0 18 10 21 6 20 26 5 10 5 6 0 0 0 0 0 0 0 1 3 6 14 14
Bud Site 0 0 0 1 2 4 3 3 5 6 9 11 2 2 1 0 0 0 – – – – – –
Cell Periphery 0 0 4 0 1 1 1 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0
Cytoplasm 21 33 109 114 166 193 262 217 163 217 204 193 70 124 168 144 81 83 17 26 56 36 57 64
Endoplasmic Reticulum 3 1 3 0 1 1 2 0 1 0 0 0 1 2 1 19 5 13 1 1 1 3 4 3
Endosome 0 0 0 5 2 5 5 1 1 3 1 3 15 30 27 66 22 27 8 4 3 6 33 41
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 2 1 1
Mitochondria 69 70 2 58 45 186 283 136 362 311 359 295 133 60 67 26 6 20 8 5 18 20 59 61
Nucleus 51 63 116 103 164 172 168 116 119 133 92 103 212 224 229 66 50 48 62 89 112 100 90 64
Nuclear Periphery 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 3 1 0 2 4 3
Nucleolus 0 0 0 0 1 0 1 1 1 2 4 5 3 8 6 0 0 1 7 8 10 12 22 18
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
SpindlePole 2 2 5 29 19 10 42 31 11 19 14 27 3 17 7 4 6 1 18 12 21 21 57 67
Vac/Vac Membrane 46 26 11 10 36 34 27 59 19 24 30 30 54 66 135 163 99 94 59 55 153 166 286 266
Unique Cell Count 149 165 258 292 421 529 687 523 560 605 605 570 417 486 583 395 236 238 196 214 404 397 671 646
Labelled Cell Count 193 195 270 331 461 614 824 593 697 733 732 696 498 534 643 491 269 292 196 214 404 397 671 646


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 4.0 3.7 4.8 4.3 4.9 3.8 4.0 4.3 3.5 3.5 3.4 3.7 4.1 4.2 4.2 5.9 6.2 6.0 3.9 3.8 4.2
Std Deviation (1e-4) 0.5 0.6 0.7 1.1 1.1 0.9 0.9 1.1 0.9 0.9 0.9 0.6 0.7 1.0 0.9 1.3 1.3 1.2 0.9 0.8 1.0
Intensity Change (Log2) – – – -0.15 0.03 -0.33 -0.27 -0.17 -0.47 -0.45 -0.49 -0.37 -0.24 -0.19 -0.19 0.3 0.35 0.31 -0.3 -0.36 -0.19


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – 0 0 0
Bud Neck – – – – – – – – – – – – 0 0 0
Bud Site – – – – – – – – – – – – 0 0 0
Cell Periphery – – – – – – – – – – – – 0 0 0
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – 0 0 0
Endosome – – – – – – – – – – – – 0 0 0
Golgi – – – – – – – – – – – – 0 0 0
Mitochondria – – – – – – – – – – – – 0 0 0
Nuclear Periphery – – – – – – – – – – – – 0 0 0
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – 0 0 0
Peroxisomes – – – – – – – – – – – – 0 0 0
SpindlePole – – – – – – – – – – – – 0 0 0
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – 0 0 0
Cytoplasm – – – – – – – – – – – – 0 0 0
Nucleus – – – – – – – – – – – – 0 0 0
Vacuole – – – – – – – – – – – – 10.5 10.1 9.6

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration -0.9214 -0.8058 -0.8237 -1.2288 -1.4098 -1.0024 -0.8436 -1.0258 -0.9946 -0.9134 -1.1856 -1.0905 -0.8856 -0.7964 -1.0731 -0.3394 -0.9997 -0.962
Actin 0.0077 0.0064 0.0136 0.0021 0.0091 0.0119 0.0145 0.0002 0.0041 0.0063 0.0027 0.0012 0.0173 0.0003 0.014 0.0547 0.0178 0.0047
Bud 0.0006 0.0077 0.0009 0.0001 0.0003 0.001 0.001 0.0003 0.0002 0.0005 0.0005 0.0002 0.0006 0.0002 0.0003 0.0008 0.0028 0.0003
Bud Neck 0.0167 0.0011 0.0071 0.0026 0.0023 0.0089 0.0038 0.0021 0.0014 0.0256 0.0014 0.0078 0.0021 0.003 0.0021 0.004 0.0049 0.0093
Bud Periphery 0.001 0.0018 0.0021 0.0002 0.0004 0.0017 0.0019 0.0004 0.0002 0.0013 0.0008 0.0004 0.0008 0.0002 0.0005 0.001 0.0052 0.0004
Bud Site 0.0095 0.005 0.0058 0.0009 0.0006 0.0021 0.0056 0.0074 0.0019 0.0048 0.0009 0.0018 0.0021 0.0051 0.0032 0.0088 0.0023 0.0008
Cell Periphery 0.0006 0.0003 0.0007 0.0002 0.0001 0.0002 0.0004 0.0003 0.0001 0.0002 0.0001 0.0002 0.0002 0.0004 0.0003 0.0004 0.0004 0.0001
Cytoplasm 0.0986 0.1679 0.1243 0.0594 0.1118 0.1245 0.106 0.1529 0.1413 0.1109 0.1311 0.1243 0.1422 0.2106 0.1956 0.1158 0.1205 0.1676
Cytoplasmic Foci 0.0407 0.0163 0.0212 0.0131 0.0178 0.0103 0.045 0.0118 0.0188 0.0297 0.0349 0.0118 0.0258 0.0096 0.0156 0.0282 0.0161 0.0121
Eisosomes 0.0003 0.0003 0.0003 0.0001 0.0001 0.0002 0.0003 0.0001 0.0001 0.0002 0.0001 0.0001 0.0002 0.0001 0.0004 0.0003 0.0005 0.0001
Endoplasmic Reticulum 0.0113 0.0069 0.0086 0.0088 0.0055 0.0058 0.0085 0.0052 0.0083 0.0067 0.0034 0.0044 0.0084 0.011 0.0133 0.0126 0.0037 0.0043
Endosome 0.0217 0.0148 0.0256 0.0132 0.026 0.0107 0.0541 0.0151 0.0317 0.03 0.0511 0.0187 0.0355 0.0133 0.0234 0.0518 0.0248 0.0199
Golgi 0.002 0.0016 0.0075 0.0013 0.0029 0.0032 0.0124 0.0004 0.0053 0.0137 0.0118 0.0013 0.009 0.0005 0.0042 0.0181 0.0287 0.0059
Lipid Particles 0.0223 0.0063 0.0113 0.0106 0.0053 0.0024 0.0383 0.0038 0.0132 0.0073 0.0597 0.0096 0.0301 0.0051 0.0168 0.0233 0.0264 0.0095
Mitochondria 0.0037 0.0036 0.0047 0.002 0.0027 0.002 0.0183 0.0019 0.0051 0.0187 0.0129 0.0021 0.008 0.0009 0.0155 0.0224 0.0359 0.0021
None 0.3773 0.3841 0.3732 0.2547 0.2382 0.2154 0.2146 0.3514 0.274 0.304 0.2059 0.1282 0.2301 0.274 0.2075 0.1765 0.1688 0.1206
Nuclear Periphery 0.0253 0.0267 0.0358 0.0341 0.024 0.0252 0.0528 0.0262 0.0457 0.0455 0.0259 0.022 0.0305 0.032 0.0474 0.0521 0.0138 0.0249
Nucleolus 0.0101 0.013 0.0172 0.0291 0.0239 0.0147 0.0264 0.0298 0.0427 0.008 0.0115 0.0427 0.01 0.0381 0.0163 0.0068 0.0234 0.0159
Nucleus 0.2606 0.2801 0.2609 0.4951 0.4373 0.4926 0.3213 0.331 0.3336 0.3207 0.2761 0.535 0.3789 0.3436 0.3743 0.3553 0.4341 0.5341
Peroxisomes 0.0052 0.0009 0.0074 0.0033 0.0039 0.0006 0.02 0.0009 0.0037 0.0065 0.011 0.0045 0.0242 0.0003 0.0041 0.0229 0.0099 0.0024
Punctate Nuclear 0.0663 0.0462 0.0589 0.061 0.0814 0.0623 0.0403 0.0401 0.0571 0.0479 0.1531 0.0775 0.0344 0.0411 0.0334 0.0296 0.0511 0.0601
Vacuole 0.0152 0.008 0.0114 0.0069 0.0049 0.0032 0.01 0.0174 0.0096 0.0082 0.0035 0.0055 0.0079 0.0096 0.0098 0.0119 0.0065 0.004
Vacuole Periphery 0.0032 0.001 0.0016 0.0011 0.0015 0.001 0.0046 0.0013 0.0017 0.0035 0.0018 0.0008 0.0015 0.0009 0.002 0.0025 0.0025 0.0009

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 3.4498 6.6423 4.2247 6.0318 5.1609 8.4871 8.5149 7.6087 5.4082 8.2393
Translational Efficiency – – – – – – – – – –

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency –

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1829 1410 499 984 1492 747 233 403 3321 2157 732 1387

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 624.77 712.20 937.33 831.86 687.26 751.32 850.48 864.07 652.84 725.75 909.69 841.22
Standard Deviation 74.54 97.82 116.40 105.81 76.32 90.55 89.51 113.54 81.51 97.17 115.86 109.10
Intensity Change Log 2 — 0.188957 0.585232 0.413016 — 0.128572 0.307421 0.330292 — 0.157642 0.446393 0.370276

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000021 0.000182 0.000566 0.001896 0.000041 0.000362 0.000380 0.000790 0.000030 0.000244 0.000507 0.001574
Bud Neck 0.003749 0.007278 0.004397 0.010319 0.002023 0.006241 0.006666 0.011748 0.002974 0.006919 0.005119 0.010734
Bud Site 0.001084 0.002272 0.003511 0.024526 0.000471 0.003313 0.002055 0.020543 0.000809 0.002632 0.003048 0.023369
Cell Periphery 0.000143 0.000128 0.000107 0.000519 0.000116 0.000133 0.000105 0.000183 0.000131 0.000130 0.000106 0.000421
Cytoplasm 0.365506* 0.198566* 0.033217 0.119686* 0.229710* 0.174491* 0.051893 0.088964 0.304498* 0.190229* 0.039162 0.110760*
Cytoplasmic Foci 0.056654 0.054550 0.001411 0.004727 0.060835 0.102493 0.000480 0.002609 0.058532 0.071153 0.001115 0.004112
Eisosomes 0.000048 0.000054 0.000028 0.000042 0.000052 0.000095 0.000028 0.000046 0.000050 0.000068 0.000028 0.000043
Endoplasmic Reticulum 0.000426 0.002764 0.008672 0.007995 0.001190 0.001891 0.006912 0.009360 0.000769 0.002462 0.008112 0.008391
Endosome 0.001710 0.002856 0.000841 0.006695 0.001848 0.006216 0.000693 0.003948 0.001772 0.004020 0.000794 0.005897
Golgi 0.000375 0.000659 0.000052 0.004205 0.000289 0.002851 0.000035 0.000457 0.000337 0.001418 0.000047 0.003116
Lipid Particles 0.004318 0.007556 0.000617 0.001203 0.006120 0.010950 0.000478 0.000868 0.005127 0.008732 0.000573 0.001106
Mitochondria 0.001076 0.005349 0.000745 0.006307 0.001174 0.007884 0.000797 0.005538 0.001120 0.006227 0.000761 0.006083
Mitotic Spindle 0.000585 0.003218 0.000584 0.017432 0.000239 0.002770 0.000235 0.016123 0.000429 0.003063 0.000473 0.017052
None 0.017296 0.010885 0.002113 0.009180 0.005712 0.003917 0.004059 0.017394 0.012092 0.008472 0.002733 0.011566
Nuclear Periphery 0.000563 0.002664 0.001685 0.003116 0.001947 0.001786 0.001820 0.002942 0.001184 0.002360 0.001728 0.003066
Nuclear Periphery Foci 0.000339 0.001384 0.000632 0.001869 0.000604 0.001321 0.000342 0.001599 0.000458 0.001362 0.000540 0.001791
Nucleolus 0.002413 0.005669 0.000881 0.001946 0.002912 0.005060 0.001067 0.002495 0.002638 0.005458 0.000940 0.002106
Nucleus 0.536136* 0.675295* 0.926743* 0.727583* 0.674176* 0.632388* 0.910040* 0.772949* 0.598152* 0.660435* 0.921426* 0.740764*
Peroxisomes 0.000907 0.003730 0.000113 0.001385 0.001528 0.012166 0.000136 0.000275 0.001186 0.006651 0.000120 0.001063
Vacuole 0.006384 0.014103 0.012978 0.044974 0.008745 0.022521 0.011684 0.036042 0.007445 0.017018 0.012566 0.042379
Vacuole Periphery 0.000266 0.000835 0.000106 0.004393 0.000267 0.001151 0.000096 0.005126 0.000267 0.000944 0.000103 0.004606

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -6.63 -12.36 -5.06 -4.32 -1.97 -2.85 -7.69 -6.43 -3.99 -3.75 -5.31 -14.27 -6.65 -5.31 -3.01
Bud Neck -2.85 -2.36 -6.74 -3.14 -5.45 -3.90 -3.24 -5.04 -3.16 -2.25 -4.56 -4.45 -9.02 -4.54 -5.09
Bud Site -2.03 -1.61 -6.30 -5.64 -4.06 -1.98 -2.33 -4.37 -3.22 -3.78 -2.94 -2.07 -7.71 -6.43 -5.37
Cell Periphery 0.65 0.66 -1.06 -1.20 -1.21 -1.68 0.76 -2.65 -1.43 -2.74 -0.10 0.72 -1.31 -1.30 -1.45
Cytoplasm 20.52 50.49 35.99 13.93 -11.07 6.06 21.41 19.39 10.94 -3.12 18.52 51.70 37.98 17.29 -10.85
Cytoplasmic Foci -0.13 23.78 23.43 17.27 -2.46 -6.37 21.03 19.68 17.14 -3.30 -4.14 31.32 30.44 24.01 -3.62
Eisosomes -2.85 2.45 -4.61 -1.35 -5.87 -7.60 3.38 -3.94 2.67 -5.72 -7.03 4.10 -5.79 1.37 -8.14
Endoplasmic Reticulum -12.48 -15.25 -24.18 -18.00 -0.96 -2.72 -9.16 -13.32 -12.52 -4.73 -11.05 -17.55 -26.34 -21.85 -3.50
Endosome -3.82 1.94 -3.06 -0.84 -4.12 -3.72 5.47 -2.04 2.24 -3.69 -5.12 4.06 -3.63 1.09 -5.33
Golgi -1.55 2.23 -1.46 -1.01 -1.92 -2.29 3.96 0.40 2.33 -2.70 -2.72 3.47 -1.47 0.49 -2.04
Lipid Particles -4.07 7.28 6.37 8.98 -3.10 -3.74 12.43 9.68 7.94 -5.57 -5.28 13.17 11.26 12.00 -5.45
Mitochondria -4.77 1.16 -2.59 1.55 -2.85 -4.30 1.74 -1.89 2.68 -2.24 -6.41 2.08 -3.11 2.79 -3.51
Mitotic Spindle -2.31 -1.87 -5.75 -4.54 -5.17 -1.96 -0.70 -3.71 -3.04 -3.68 -3.04 -2.07 -6.87 -5.49 -6.35
None 3.23 10.33 6.14 2.77 -3.85 2.70 2.42 -2.25 -3.03 -3.03 2.96 10.80 3.32 0.59 -4.82
Nuclear Periphery -6.80 -9.83 -20.96 -7.00 -10.40 0.55 -2.16 -7.89 -8.01 -6.34 -5.37 -7.81 -19.74 -10.26 -12.22
Nuclear Periphery Foci -5.16 -3.41 -5.34 -1.94 -3.29 -0.87 1.34 -3.69 -1.92 -3.98 -3.36 -2.49 -6.33 -2.66 -4.98
Nucleolus -5.88 3.63 0.80 6.49 -2.53 -2.51 6.05 0.39 2.25 -2.46 -6.19 6.43 1.17 6.47 -3.52
Nucleus -13.07 -41.11 -16.46 -4.26 17.33 3.20 -20.10 -3.43 -5.33 10.36 -7.17 -43.45 -13.72 -6.67 20.18
Peroxisomes -6.91 5.01 1.35 7.54 -2.90 -6.04 8.06 6.69 6.85 -3.94 -8.29 9.22 4.26 9.37 -3.44
Vacuole -7.23 -5.30 -16.26 -14.38 -11.47 -6.40 -3.16 -9.79 -8.09 -7.59 -9.39 -6.04 -18.84 -16.28 -13.78
Vacuole Periphery -4.23 2.11 -1.94 -1.11 -2.13 -4.09 4.57 -1.05 -0.49 -1.16 -5.93 3.80 -2.14 -1.12 -2.36
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Protein involved in nucleotide excision repair (NER); homologous to RAD4
Localization
Cell Percentages nucleus (22%), cytoplasm (12%), mixed (54%)
Cell Cycle Regulation Yes
cytoplasm - MA (0.00045)
Subcompartmental Group N/A

Rad34

Rad34


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rad34-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
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