Standard name | |
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Human Ortholog | |
Description | GTPase-activating protein for polarity-establishment protein Cdc42p; implicated in control of septin organization, pheromone response, and haploid invasive growth; regulated by Pho85p and Cdc28p; RGA2 has a paralog, RGA1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 1 | 0 | 2 | 0 | 1 | 0 | 1 | 0 | – | 3 | 3 | 0 | 0 | 0 | – | – | – | 3 | 3 | 4 | 0 | 1 | 1 |
Bud | 1 | 0 | 3 | 1 | 7 | 2 | 5 | 13 | 7 | – | 7 | 7 | 1 | 0 | 8 | – | – | – | 0 | 0 | 0 | 4 | 1 | 4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | – | – | – | 2 | 3 | 4 | 1 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 2 | 0 | 0 | 0 | – | – | – | – | – | – | – | – | – |
Cell Periphery | 12 | 8 | 4 | 5 | 2 | 9 | 13 | 7 | 5 | – | 15 | 13 | 16 | 14 | 32 | – | – | – | 0 | 0 | 2 | 0 | 0 | 0 |
Cytoplasm | 190 | 276 | 351 | 295 | 367 | 393 | 445 | 497 | 277 | – | 211 | 209 | 335 | 415 | 434 | – | – | – | 184 | 274 | 322 | 311 | 375 | 340 |
Endoplasmic Reticulum | 7 | 2 | 1 | 0 | 3 | 2 | 3 | 2 | 7 | – | 6 | 10 | 0 | 0 | 2 | – | – | – | 5 | 1 | 4 | 3 | 8 | 11 |
Endosome | 2 | 0 | 1 | 0 | 3 | 1 | 0 | 6 | 0 | – | 1 | 0 | 0 | 0 | 0 | – | – | – | 4 | 3 | 0 | 0 | 2 | 2 |
Golgi | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – | 3 | 0 | 0 | 0 | 2 | 3 |
Mitochondria | 3 | 5 | 4 | 31 | 15 | 91 | 101 | 195 | 159 | – | 159 | 178 | 0 | 0 | 3 | – | – | – | 7 | 4 | 17 | 4 | 5 | 10 |
Nucleus | 3 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 3 | – | 0 | 1 | 1 | 2 | 1 | – | – | – | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 2 | – | 0 | 1 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 1 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | – | 0 | 3 | 0 | 1 | 0 | – | – | – | 0 | 0 | 0 | 0 | 1 | 2 |
Vac/Vac Membrane | 1 | 0 | 0 | 0 | 4 | 6 | 4 | 13 | 5 | – | 1 | 6 | 2 | 0 | 0 | – | – | – | 2 | 7 | 5 | 4 | 6 | 4 |
Unique Cell Count | 207 | 281 | 356 | 306 | 377 | 436 | 505 | 609 | 376 | 317 | 335 | 338 | 418 | 436 | 218 | 302 | 367 | 336 | 411 | 389 | ||||
Labelled Cell Count | 223 | 293 | 367 | 338 | 401 | 507 | 576 | 738 | 466 | 404 | 434 | 355 | 432 | 481 | 218 | 302 | 367 | 336 | 411 | 389 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.8 | 5.3 | 4.6 | 4.5 | 4.9 | 4.4 | 4.3 | 4.2 | 3.9 | – | 3.9 | 3.8 | 5.7 | 5.9 | 5.2 | – | – | – | 5.6 | 5.6 | 6.6 |
Std Deviation (1e-4) | 0.8 | 0.7 | 0.9 | 1.0 | 1.1 | 1.0 | 1.1 | 1.0 | 1.1 | – | 1.0 | 1.2 | 1.0 | 1.2 | 1.0 | – | – | – | 1.1 | 1.1 | 1.5 |
Intensity Change (Log2) | – | – | – | -0.05 | 0.08 | -0.08 | -0.12 | -0.13 | -0.25 | – | -0.24 | -0.27 | 0.3 | 0.35 | 0.16 | – | – | – | 0.27 | 0.28 | 0.5 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 2.8 | 2.0 | 4.2 | – | – | – |
Cytoplasm | -1.8 | -1.2 | -5.0 | -5.7 | -7.8 | -9.7 | – | -11.2 | -12.1 | 0.6 | 0.9 | 1.4 | – | – | – |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Mitochondria | 0 | 2.4 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.4416 | 3.2672 | 3.3092 | 2.336 | 2.9144 | 2.9579 | 0.8264 | 0.746 | 1.1468 | 0.5683 | -0.2413 | 1.0605 | 4.3731 | 4.9584 | 4.9929 | 5.4178 | 4.4412 | 4.9328 |
Actin | 0.0588 | 0.0106 | 0.0198 | 0.0006 | 0.0045 | 0.0017 | 0.0286 | 0.002 | 0.0052 | 0.0093 | 0.0029 | 0.0188 | 0.0044 | 0.0071 | 0.004 | 0.0007 | 0.0024 | 0.0107 |
Bud | 0.001 | 0.0041 | 0.0055 | 0.0003 | 0.0008 | 0.0002 | 0.0023 | 0.0013 | 0.0062 | 0.0112 | 0.0002 | 0.003 | 0.0005 | 0.0009 | 0.0069 | 0.0152 | 0.0207 | 0.0013 |
Bud Neck | 0.0181 | 0.0005 | 0.0028 | 0.0004 | 0.0009 | 0.0328 | 0.0128 | 0.0005 | 0.0011 | 0.0011 | 0.0058 | 0.0174 | 0.0016 | 0.0012 | 0.001 | 0.0008 | 0.0493 | 0.0167 |
Bud Periphery | 0.0027 | 0.003 | 0.0086 | 0.0005 | 0.0008 | 0.0003 | 0.0019 | 0.0018 | 0.0065 | 0.0177 | 0.0002 | 0.0061 | 0.0008 | 0.0008 | 0.0019 | 0.0102 | 0.0299 | 0.0011 |
Bud Site | 0.0078 | 0.0146 | 0.0204 | 0.0006 | 0.0029 | 0.0002 | 0.0143 | 0.0097 | 0.0087 | 0.0036 | 0.0012 | 0.0113 | 0.0087 | 0.0344 | 0.0061 | 0.0026 | 0.0015 | 0.0008 |
Cell Periphery | 0.0019 | 0.0027 | 0.0012 | 0.0012 | 0.0003 | 0.0009 | 0.0013 | 0.0011 | 0.0005 | 0.0006 | 0.0001 | 0.0005 | 0.0014 | 0.001 | 0.001 | 0.0003 | 0.0014 | 0.0006 |
Cytoplasm | 0.5433 | 0.7759 | 0.7093 | 0.822 | 0.5455 | 0.7724 | 0.5421 | 0.7376 | 0.7103 | 0.7491 | 0.7845 | 0.7701 | 0.6204 | 0.6925 | 0.6829 | 0.762 | 0.711 | 0.7247 |
Cytoplasmic Foci | 0.0222 | 0.0102 | 0.0322 | 0.007 | 0.0346 | 0.0152 | 0.0342 | 0.0219 | 0.0186 | 0.0171 | 0.0309 | 0.0141 | 0.0104 | 0.0132 | 0.0229 | 0.0216 | 0.0055 | 0.0153 |
Eisosomes | 0.001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0141 | 0.0065 | 0.0043 | 0.0191 | 0.0047 | 0.0078 | 0.0158 | 0.0079 | 0.0064 | 0.0063 | 0.0037 | 0.0076 | 0.0049 | 0.0031 | 0.0055 | 0.005 | 0.0019 | 0.0029 |
Endosome | 0.0417 | 0.0052 | 0.0133 | 0.0086 | 0.0315 | 0.0072 | 0.0244 | 0.0249 | 0.0195 | 0.0199 | 0.0203 | 0.0208 | 0.0064 | 0.0069 | 0.0067 | 0.0119 | 0.0028 | 0.0054 |
Golgi | 0.0082 | 0.0017 | 0.0022 | 0.0008 | 0.0078 | 0.002 | 0.0026 | 0.0028 | 0.0023 | 0.0049 | 0.0032 | 0.006 | 0.0021 | 0.0012 | 0.0012 | 0.0008 | 0.0002 | 0.0009 |
Lipid Particles | 0.0065 | 0.0016 | 0.0028 | 0.0006 | 0.0138 | 0.0022 | 0.002 | 0.0013 | 0.0016 | 0.0275 | 0.0108 | 0.0023 | 0.0018 | 0.0003 | 0.0009 | 0.0002 | 0.0002 | 0.0004 |
Mitochondria | 0.0062 | 0.0014 | 0.0011 | 0.0006 | 0.0014 | 0.0006 | 0.0023 | 0.0011 | 0.005 | 0.004 | 0.0009 | 0.0013 | 0.0013 | 0.0006 | 0.0005 | 0.0008 | 0.0002 | 0.0004 |
None | 0.2196 | 0.1511 | 0.1491 | 0.126 | 0.3313 | 0.1505 | 0.2419 | 0.1724 | 0.1763 | 0.0931 | 0.076 | 0.0984 | 0.3264 | 0.2289 | 0.248 | 0.1578 | 0.1697 | 0.2135 |
Nuclear Periphery | 0.016 | 0.0017 | 0.0023 | 0.0013 | 0.004 | 0.0007 | 0.0241 | 0.0016 | 0.0079 | 0.0069 | 0.0011 | 0.0045 | 0.0014 | 0.0008 | 0.001 | 0.0007 | 0.0003 | 0.0004 |
Nucleolus | 0.0009 | 0.0004 | 0.0003 | 0.0002 | 0.0006 | 0.0001 | 0.0015 | 0.0003 | 0.0008 | 0.0005 | 0.0034 | 0.0004 | 0.0005 | 0.0002 | 0.0003 | 0.0002 | 0.0001 | 0.0001 |
Nucleus | 0.0162 | 0.0018 | 0.0117 | 0.0022 | 0.0018 | 0.0008 | 0.0248 | 0.0026 | 0.0073 | 0.0045 | 0.0028 | 0.0022 | 0.0015 | 0.0023 | 0.0018 | 0.0014 | 0.001 | 0.0008 |
Peroxisomes | 0.0027 | 0.0005 | 0.0069 | 0.0001 | 0.0022 | 0.0018 | 0.0033 | 0.0008 | 0.0009 | 0.0117 | 0.0123 | 0.0011 | 0.0005 | 0.0006 | 0.0015 | 0.0011 | 0.0001 | 0.001 |
Punctate Nuclear | 0.0042 | 0.0014 | 0.0034 | 0.0002 | 0.0076 | 0.0008 | 0.0078 | 0.0011 | 0.0057 | 0.0047 | 0.0363 | 0.0094 | 0.0014 | 0.001 | 0.0027 | 0.0012 | 0.0002 | 0.001 |
Vacuole | 0.0047 | 0.0045 | 0.0024 | 0.007 | 0.0023 | 0.0017 | 0.0098 | 0.0066 | 0.0062 | 0.0045 | 0.0029 | 0.0039 | 0.0029 | 0.0027 | 0.0025 | 0.0047 | 0.0017 | 0.0014 |
Vacuole Periphery | 0.0022 | 0.0004 | 0.0003 | 0.0007 | 0.0005 | 0.0002 | 0.0018 | 0.0008 | 0.0029 | 0.0017 | 0.0004 | 0.0007 | 0.0003 | 0.0002 | 0.0003 | 0.0005 | 0.0002 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 7.2832 | 7.8129 | 7.9716 | 13.8718 | 7.0822 | 10.1908 | 10.2036 | 13.3292 | 11.8282 | 11.9067 |
Translational Efficiency | 0.7867 | 0.7607 | 1.0753 | 0.5964 | 1.0807 | 0.7722 | 0.8444 | 0.718 | 0.8745 | 0.7795 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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