Standard name | |
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Human Ortholog | |
Description | Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 7 | 0 | 5 | 13 | 4 | 9 | 1 | 9 | 6 | 6 | 13 | 10 | 5 | 16 | 5 | 12 | 1 | 0 | 5 | 10 | 28 | 22 |
Bud | 0 | 0 | 0 | 2 | 2 | 5 | 2 | 6 | 7 | 4 | 7 | 6 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 3 | 7 | 4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 2 | 9 | 9 | 5 | 3 | 3 | 5 | 4 | 0 | 6 | 22 | 27 | 29 | 18 | 29 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 9 | 13 | 22 | 22 | 56 | 55 | 59 | 53 | 48 | 71 | 62 | 60 | 40 | 94 | 91 | 21 | 34 | 31 | 1 | 3 | 5 | 7 | 11 | 9 |
Endoplasmic Reticulum | 44 | 64 | 62 | 19 | 35 | 135 | 149 | 52 | 76 | 53 | 78 | 50 | 118 | 82 | 77 | 1 | 1 | 4 | 90 | 136 | 119 | 282 | 520 | 373 |
Endosome | 2 | 2 | 13 | 17 | 34 | 12 | 8 | 18 | 14 | 18 | 6 | 22 | 7 | 16 | 21 | 1 | 0 | 0 | 2 | 6 | 9 | 8 | 23 | 30 |
Golgi | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 17 | 20 | 9 | 0 | 5 | 3 | 3 | 7 | 7 |
Mitochondria | 22 | 4 | 2 | 28 | 21 | 75 | 82 | 62 | 86 | 63 | 79 | 42 | 0 | 13 | 1 | 4 | 5 | 7 | 5 | 7 | 18 | 17 | 23 | 18 |
Nucleus | 5 | 2 | 16 | 20 | 4 | 14 | 17 | 43 | 29 | 28 | 21 | 35 | 8 | 22 | 13 | 4 | 1 | 0 | 2 | 0 | 1 | 1 | 0 | 0 |
Nuclear Periphery | 84 | 91 | 100 | 32 | 5 | 45 | 68 | 45 | 54 | 54 | 36 | 31 | 83 | 85 | 72 | 7 | 11 | 8 | 123 | 145 | 217 | 62 | 75 | 60 |
Nucleolus | 0 | 3 | 5 | 1 | 0 | 2 | 3 | 4 | 0 | 1 | 4 | 2 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
SpindlePole | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 3 | 2 |
Vac/Vac Membrane | 108 | 157 | 138 | 135 | 320 | 146 | 203 | 237 | 190 | 216 | 126 | 204 | 87 | 270 | 260 | 20 | 44 | 51 | 15 | 24 | 18 | 16 | 32 | 36 |
Unique Cell Count | 207 | 272 | 295 | 240 | 431 | 418 | 500 | 458 | 420 | 442 | 359 | 390 | 310 | 541 | 494 | 107 | 121 | 129 | 250 | 337 | 410 | 423 | 746 | 578 |
Labelled Cell Count | 274 | 339 | 366 | 280 | 492 | 511 | 601 | 534 | 508 | 522 | 429 | 458 | 363 | 620 | 572 | 120 | 140 | 151 | 250 | 337 | 410 | 423 | 746 | 578 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.1 | 10.8 | 8.3 | 7.8 | 8.5 | 7.5 | 7.2 | 7.7 | 7.3 | 7.4 | 6.7 | 7.3 | 8.9 | 8.9 | 9.6 | 14.1 | 14.1 | 14.0 | 9.0 | 9.4 | 10.0 |
Std Deviation (1e-4) | 1.1 | 1.7 | 1.2 | 1.4 | 1.4 | 1.3 | 1.3 | 1.3 | 1.5 | 1.6 | 1.4 | 1.5 | 1.4 | 1.5 | 1.7 | 2.7 | 2.7 | 2.7 | 1.8 | 1.6 | 1.8 |
Intensity Change (Log2) | – | – | – | -0.08 | 0.04 | -0.15 | -0.21 | -0.1 | -0.19 | -0.17 | -0.31 | -0.19 | 0.1 | 0.11 | 0.22 | 0.77 | 0.77 | 0.76 | 0.13 | 0.18 | 0.27 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0.6 | 0 | -0.4 | 0 | -0.3 | -0.6 | -0.8 | 1.3 | -0.5 | 0 | 4.8 | 0 | 3.2 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.5 | 4.1 | 9.3 | 6.8 | 8.4 |
Cytoplasm | 0.7 | 2.4 | 2.4 | 2.0 | 1.8 | 1.8 | 3.4 | 3.7 | 3.2 | 2.2 | 4.0 | 4.3 | 3.5 | 5.6 | 4.7 |
Endoplasmic Reticulum | -4.2 | -5.0 | 3.3 | 2.7 | -3.6 | -1.0 | -3.3 | 0.2 | -2.9 | 4.6 | -2.1 | -1.9 | -4.9 | -5.2 | -4.7 |
Endosome | 1.3 | 1.9 | -1.1 | -2.4 | -0.3 | -0.7 | -0.2 | -2.1 | 0.7 | -1.5 | -1.1 | -0.1 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6.8 | 0 |
Mitochondria | 5.5 | 3.2 | 7.3 | 7.0 | 6.2 | 7.9 | 6.4 | 8.2 | 5.3 | 0 | 1.8 | 0 | 0 | 0 | 0 |
Nucleus | 1.3 | -3.6 | -1.4 | -1.4 | 2.0 | 0.8 | 0.5 | 0.2 | 1.8 | -1.8 | -0.9 | -2.0 | -0.7 | 0 | 0 |
Nuclear Periphery | -5.5 | -12.3 | -7.6 | -6.8 | -8.2 | -6.7 | -7.1 | -7.5 | -8.6 | -1.9 | -6.1 | -6.4 | -5.5 | -5.2 | -6.0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 2.2 | 7.5 | -3.2 | -1.7 | 1.3 | -0.4 | 0.6 | -3.0 | 1.4 | -4.8 | 0.9 | 1.6 | -5.1 | -1.9 | -1.4 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.976 | 5.4095 | 5.4274 | 5.2548 | 4.3895 | 5.2397 | 5.6348 | 5.9462 | 5.4248 | 5.3242 | 4.784 | 5.3946 | 7.3751 | 6.8241 | 6.3947 | 6.5157 | 5.7732 | 6.6898 |
Actin | 0.0124 | 0.0002 | 0.0002 | 0.0003 | 0.0029 | 0.0003 | 0.0341 | 0.0003 | 0.0006 | 0.0004 | 0.0031 | 0.0008 | 0.0018 | 0.0007 | 0.0088 | 0.0017 | 0.0015 | 0.0007 |
Bud | 0.0001 | 0.0001 | 0 | 0 | 0.0003 | 0 | 0.0002 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0.0014 | 0.0003 | 0.0014 | 0 | 0 |
Bud Neck | 0.0019 | 0.0003 | 0.0001 | 0 | 0.0015 | 0.0002 | 0.0017 | 0.0002 | 0.0001 | 0 | 0.0009 | 0.0001 | 0.0002 | 0.0001 | 0.0009 | 0.0002 | 0.0001 | 0.0002 |
Bud Periphery | 0.0001 | 0.0001 | 0 | 0 | 0.0005 | 0 | 0.0003 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0005 | 0.0006 | 0.0005 | 0 | 0 |
Bud Site | 0.0011 | 0.0004 | 0 | 0 | 0.0006 | 0 | 0.0007 | 0.0001 | 0 | 0 | 0.0014 | 0 | 0.0003 | 0.0003 | 0.0018 | 0.0005 | 0.0001 | 0.0001 |
Cell Periphery | 0.0002 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0 | 0 |
Cytoplasm | 0.0024 | 0.0178 | 0.002 | 0.0006 | 0.0058 | 0.0024 | 0.0085 | 0.001 | 0.0005 | 0.0003 | 0.0023 | 0.0006 | 0.0028 | 0.0113 | 0.0026 | 0.0218 | 0.0016 | 0.0011 |
Cytoplasmic Foci | 0.0027 | 0.0006 | 0 | 0 | 0.0022 | 0.0002 | 0.0059 | 0.0002 | 0.0015 | 0 | 0.004 | 0.0015 | 0.0071 | 0.001 | 0.0055 | 0.0025 | 0.0073 | 0.0013 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0289 | 0.0588 | 0.0578 | 0.0733 | 0.1043 | 0.0176 | 0.0417 | 0.1587 | 0.1112 | 0.1351 | 0.0937 | 0.0941 | 0.0447 | 0.0726 | 0.0714 | 0.0713 | 0.0732 | 0.0511 |
Endosome | 0.0089 | 0.0053 | 0.0012 | 0.0023 | 0.0204 | 0.0027 | 0.0164 | 0.0031 | 0.0035 | 0.003 | 0.015 | 0.0043 | 0.0143 | 0.0026 | 0.0099 | 0.0336 | 0.0105 | 0.005 |
Golgi | 0.0023 | 0.0001 | 0 | 0.0001 | 0.0015 | 0.0001 | 0.0042 | 0.0002 | 0.0006 | 0.0002 | 0.0018 | 0.001 | 0.0048 | 0.0003 | 0.0023 | 0.0042 | 0.0058 | 0.0033 |
Lipid Particles | 0.0048 | 0.0003 | 0.0002 | 0.0002 | 0.0032 | 0.0003 | 0.0171 | 0.0018 | 0.0027 | 0.0004 | 0.0028 | 0.0052 | 0.0254 | 0.0014 | 0.0018 | 0.0307 | 0.042 | 0.0086 |
Mitochondria | 0.0014 | 0.0003 | 0.0003 | 0.0004 | 0.0037 | 0.0003 | 0.0021 | 0.0005 | 0.0007 | 0.0015 | 0.0011 | 0.0007 | 0.0054 | 0.0005 | 0.0021 | 0.0084 | 0.0007 | 0.0013 |
None | 0.0009 | 0.0002 | 0.0001 | 0.0001 | 0.0033 | 0.0004 | 0.0084 | 0.0001 | 0.0002 | 0.0002 | 0.0017 | 0.0001 | 0.0077 | 0.0003 | 0.0007 | 0.0008 | 0.0002 | 0.0001 |
Nuclear Periphery | 0.8395 | 0.7114 | 0.8131 | 0.8718 | 0.7562 | 0.8773 | 0.8072 | 0.7926 | 0.8363 | 0.8227 | 0.8303 | 0.8692 | 0.8229 | 0.788 | 0.8316 | 0.7123 | 0.7916 | 0.8761 |
Nucleolus | 0.0005 | 0.0012 | 0.0004 | 0.0001 | 0.0016 | 0.0004 | 0.0033 | 0.003 | 0.0001 | 0 | 0.0009 | 0.0001 | 0.0013 | 0.0006 | 0.0002 | 0.0011 | 0.0003 | 0.0002 |
Nucleus | 0.0637 | 0.1669 | 0.1057 | 0.0359 | 0.0672 | 0.0843 | 0.0124 | 0.0112 | 0.0075 | 0.0054 | 0.0193 | 0.0078 | 0.0302 | 0.0817 | 0.0304 | 0.0627 | 0.0099 | 0.0348 |
Peroxisomes | 0.0033 | 0 | 0 | 0 | 0.001 | 0 | 0.004 | 0 | 0.0055 | 0 | 0.001 | 0.0005 | 0.0036 | 0.0032 | 0.0045 | 0.0007 | 0.0297 | 0.0003 |
Punctate Nuclear | 0.0095 | 0.014 | 0.0006 | 0.0005 | 0.011 | 0.0035 | 0.008 | 0.0017 | 0.0009 | 0.0002 | 0.0099 | 0.0026 | 0.0103 | 0.0161 | 0.0035 | 0.0256 | 0.0148 | 0.0047 |
Vacuole | 0.0018 | 0.011 | 0.0015 | 0.0014 | 0.0031 | 0.0014 | 0.0033 | 0.0026 | 0.002 | 0.0018 | 0.002 | 0.001 | 0.0026 | 0.0034 | 0.0039 | 0.0057 | 0.0013 | 0.0012 |
Vacuole Periphery | 0.0135 | 0.0109 | 0.0168 | 0.0129 | 0.0097 | 0.0084 | 0.0202 | 0.0226 | 0.026 | 0.0287 | 0.0087 | 0.0102 | 0.0142 | 0.0139 | 0.0171 | 0.0139 | 0.0093 | 0.0098 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 36.0273 | 24.0345 | 21.4016 | 26.1838 | 25.0985 | 32.2454 | 26.4884 | 32.1474 | 24.6573 | 33.4479 |
Translational Efficiency | 1.1552 | 1.3745 | 1.2708 | 1.1016 | 1.1782 | 1.0806 | 1.35 | 0.9465 | 1.3458 | 1.0672 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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