Standard name | |
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Human Ortholog | |
Description | Nucleolar protein that forms a complex with Csm1p; and then Mam1p at kinetochores during meiosis I to mediate accurate homolog segregation; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | 7 | 0 | 1 | 0 | 2 | 3 | 9 | 14 | 11 | 15 | 9 | 10 | 1 | 0 | 0 | 1 | 0 | 1 | 3 | 2 | 0 | 0 | 0 | 3 |
Bud Neck | 3 | 1 | 6 | 14 | 20 | 8 | 25 | 37 | 9 | 23 | 16 | 17 | 14 | 13 | 7 | 2 | 1 | 4 | 3 | 2 | 0 | 1 | 3 | 4 |
Bud Site | 3 | 0 | 0 | 5 | 4 | 6 | 13 | 15 | 15 | 22 | 13 | 16 | 0 | 0 | 0 | 0 | 0 | 4 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 8 | 6 | 5 | 7 | 21 | 17 | 24 | 26 | 21 | 21 | 13 | 9 | 9 | 15 | 27 | 11 | 4 | 6 | 1 | 1 | 3 | 0 | 1 | 1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
Endosome | 4 | 14 | 3 | 5 | 14 | 12 | 15 | 1 | 4 | 0 | 0 | 1 | 11 | 20 | 27 | 28 | 14 | 25 | 54 | 30 | 19 | 7 | 18 | 18 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Mitochondria | 169 | 23 | 14 | 14 | 6 | 46 | 84 | 58 | 87 | 104 | 107 | 90 | 6 | 1 | 1 | 17 | 5 | 19 | 12 | 4 | 7 | 0 | 1 | 1 |
Nucleus | 49 | 45 | 21 | 44 | 30 | 23 | 33 | 35 | 26 | 38 | 28 | 25 | 30 | 27 | 20 | 16 | 7 | 17 | 21 | 20 | 8 | 1 | 2 | 3 |
Nuclear Periphery | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 12 | 5 | 2 | 0 | 0 | 0 |
Nucleolus | 58 | 39 | 9 | 27 | 22 | 37 | 83 | 54 | 68 | 82 | 63 | 55 | 69 | 79 | 55 | 32 | 23 | 38 | 88 | 53 | 24 | 21 | 37 | 33 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 3 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 0 | 3 | 0 | 0 | 1 | 0 | 2 | 0 |
SpindlePole | 50 | 22 | 31 | 73 | 121 | 82 | 145 | 157 | 131 | 141 | 79 | 94 | 111 | 135 | 119 | 56 | 23 | 39 | 56 | 37 | 33 | 33 | 72 | 102 |
Vac/Vac Membrane | 11 | 11 | 0 | 2 | 6 | 4 | 2 | 3 | 0 | 6 | 3 | 4 | 1 | 0 | 2 | 6 | 3 | 7 | 21 | 9 | 11 | 0 | 6 | 6 |
Unique Cell Count | 253 | 127 | 65 | 143 | 183 | 159 | 277 | 270 | 232 | 271 | 208 | 197 | 179 | 186 | 170 | 111 | 50 | 97 | 291 | 173 | 117 | 72 | 154 | 184 |
Labelled Cell Count | 364 | 163 | 91 | 192 | 247 | 242 | 441 | 400 | 373 | 452 | 332 | 321 | 252 | 293 | 262 | 174 | 80 | 165 | 291 | 173 | 117 | 72 | 154 | 184 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.7 | 5.0 | 4.8 | 5.0 | 5.3 | 4.3 | 4.1 | 4.2 | 3.8 | 3.7 | 3.7 | 3.8 | 5.1 | 5.6 | 5.2 | 6.6 | 6.7 | 6.1 | 4.5 | 5.3 | 5.6 |
Std Deviation (1e-4) | 0.4 | 0.8 | 1.1 | 1.6 | 1.8 | 1.4 | 1.8 | 1.4 | 1.7 | 1.2 | 1.5 | 1.0 | 0.8 | 1.1 | 1.1 | 1.3 | 1.3 | 1.2 | 1.1 | 1.2 | 1.1 |
Intensity Change (Log2) | – | – | – | 0.04 | 0.13 | -0.15 | -0.25 | -0.2 | -0.34 | -0.39 | -0.39 | -0.35 | 0.08 | 0.21 | 0.12 | 0.45 | 0.47 | 0.34 | -0.09 | 0.13 | 0.23 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0.1 | 0.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.4 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0.9 | 0.7 | 0.3 | 0.5 | 0.3 | 0 | 0 | 0 | 0 | 0.1 | 1.6 | 0.5 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.5 | 2.3 | 3.5 | 3.5 | 3.5 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | -2.3 | -4.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -4.6 | 0 | 0 | -1.0 | -1.7 | -0.3 |
Nucleus | -0.2 | -2.7 | -3.1 | -4.1 | -3.8 | -4.1 | -3.5 | -3.5 | -3.6 | -2.6 | -3.1 | -3.7 | -2.8 | -2.3 | -2.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0.9 | -0.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.7 | 4.2 | 2.9 | 2.3 | 3.8 | 3.5 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0.4 | 2.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.0 | 3.6 | 3.2 | 0.4 | -0.2 | -0.9 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.3622 | 0.9282 | 1.2119 | 0.5133 | 0.3786 | 1.0723 | 0.513 | 0.3745 | 0.3838 | 0.6682 | -0.2979 | 0.233 | 0.5557 | -0.0117 | -0.7929 | -0.4165 | -0.7541 | -0.7891 |
Actin | 0.0029 | 0.0001 | 0.0023 | 0 | 0.0007 | 0.0006 | 0.0086 | 0.0001 | 0.0031 | 0.0019 | 0.0056 | 0.001 | 0.0164 | 0.0001 | 0.0009 | 0 | 0.0005 | 0.0014 |
Bud | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0002 |
Bud Neck | 0.0017 | 0.0018 | 0.0023 | 0.0022 | 0.0307 | 0.0035 | 0.003 | 0.0048 | 0.0031 | 0.0033 | 0.0217 | 0.0021 | 0.0022 | 0.0022 | 0.0031 | 0.0151 | 0.0017 | 0.0029 |
Bud Periphery | 0.0007 | 0.0002 | 0.0005 | 0.0001 | 0.0003 | 0.0003 | 0.0007 | 0.0003 | 0.0006 | 0.0007 | 0.0002 | 0.0004 | 0.0005 | 0.0002 | 0.0003 | 0.0002 | 0.0001 | 0.0008 |
Bud Site | 0.0023 | 0.0013 | 0.0017 | 0.0003 | 0.0007 | 0.0004 | 0.0063 | 0.0046 | 0.0018 | 0.0008 | 0.0004 | 0.0004 | 0.0023 | 0.0014 | 0.0022 | 0.0017 | 0.0004 | 0.0009 |
Cell Periphery | 0.0005 | 0.0002 | 0.0003 | 0.0002 | 0.0003 | 0.0001 | 0.0004 | 0.0003 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0.0005 | 0.0008 | 0.0015 | 0.0001 | 0.0002 |
Cytoplasm | 0.0109 | 0.001 | 0.002 | 0.0001 | 0.0002 | 0.0021 | 0.0015 | 0.0018 | 0.001 | 0.0005 | 0.0002 | 0.0012 | 0.1282 | 0.0852 | 0.0166 | 0.0003 | 0.0076 | 0.0058 |
Cytoplasmic Foci | 0.0222 | 0.0165 | 0.0199 | 0.0294 | 0.0148 | 0.0081 | 0.0161 | 0.0093 | 0.0133 | 0.0089 | 0.0132 | 0.0041 | 0.0553 | 0.0121 | 0.0214 | 0.0233 | 0.0097 | 0.0092 |
Eisosomes | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0032 | 0.0002 | 0.0005 | 0 | 0.0003 | 0.0012 | 0.0013 | 0.0001 | 0.0009 | 0.001 | 0.0002 | 0.0004 | 0.0196 | 0.0024 | 0.0207 | 0 | 0.0017 | 0.0075 |
Endosome | 0.0271 | 0.0049 | 0.0211 | 0.0053 | 0.0042 | 0.0093 | 0.0183 | 0.0051 | 0.0123 | 0.0192 | 0.0082 | 0.005 | 0.0674 | 0.004 | 0.0071 | 0.0045 | 0.0535 | 0.012 |
Golgi | 0.01 | 0.0029 | 0.0109 | 0.002 | 0.0054 | 0.0042 | 0.0057 | 0.001 | 0.0044 | 0.0043 | 0.0069 | 0.0017 | 0.0119 | 0.0014 | 0.0038 | 0.0009 | 0.0015 | 0.0023 |
Lipid Particles | 0.1543 | 0.1038 | 0.0944 | 0.1944 | 0.1368 | 0.0494 | 0.0712 | 0.0425 | 0.0526 | 0.0469 | 0.0427 | 0.0321 | 0.1543 | 0.0405 | 0.0672 | 0.034 | 0.0128 | 0.0265 |
Mitochondria | 0.0089 | 0.0005 | 0.0252 | 0.0001 | 0.1045 | 0.0018 | 0.0052 | 0.0002 | 0.0073 | 0.0045 | 0.0109 | 0.0017 | 0.0026 | 0.0003 | 0.0314 | 0.0001 | 0.0007 | 0.0022 |
None | 0.0101 | 0.0026 | 0.0023 | 0.0002 | 0.0004 | 0.0042 | 0.0019 | 0.003 | 0.0021 | 0.0008 | 0.0004 | 0.002 | 0.0158 | 0.0016 | 0.0019 | 0.0013 | 0.0024 | 0.0727 |
Nuclear Periphery | 0.0501 | 0.0193 | 0.0131 | 0.0005 | 0.0434 | 0.1365 | 0.0255 | 0.0036 | 0.0121 | 0.0208 | 0.0012 | 0.084 | 0.0851 | 0.0504 | 0.0052 | 0.0004 | 0.1075 | 0.3301 |
Nucleolus | 0.3253 | 0.4791 | 0.5702 | 0.5347 | 0.1294 | 0.3196 | 0.4314 | 0.5447 | 0.5747 | 0.6319 | 0.2886 | 0.3702 | 0.1595 | 0.5487 | 0.5886 | 0.6629 | 0.4197 | 0.1331 |
Nucleus | 0.0552 | 0.0836 | 0.0481 | 0.0323 | 0.0124 | 0.1089 | 0.0909 | 0.112 | 0.0572 | 0.035 | 0.053 | 0.11 | 0.0241 | 0.0799 | 0.074 | 0.035 | 0.1462 | 0.0692 |
Peroxisomes | 0.015 | 0.0032 | 0.0089 | 0.0048 | 0.0037 | 0.002 | 0.012 | 0.0015 | 0.0053 | 0.0046 | 0.0067 | 0.0024 | 0.0287 | 0.0009 | 0.0053 | 0.0017 | 0.0019 | 0.0018 |
Punctate Nuclear | 0.2819 | 0.2765 | 0.1717 | 0.192 | 0.5098 | 0.3429 | 0.2953 | 0.2576 | 0.2431 | 0.2097 | 0.5386 | 0.3783 | 0.2178 | 0.1651 | 0.134 | 0.2074 | 0.2277 | 0.3087 |
Vacuole | 0.013 | 0.0014 | 0.0029 | 0.0012 | 0.0007 | 0.0023 | 0.0027 | 0.0066 | 0.0029 | 0.0025 | 0.0007 | 0.0013 | 0.0046 | 0.002 | 0.0149 | 0.0096 | 0.0019 | 0.0057 |
Vacuole Periphery | 0.0044 | 0.0006 | 0.0013 | 0.0001 | 0.0011 | 0.0024 | 0.0016 | 0.0007 | 0.0018 | 0.0019 | 0.0004 | 0.0015 | 0.0031 | 0.001 | 0.0007 | 0.0002 | 0.0023 | 0.0068 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 5.813 | 8.5032 | 5.6087 | 6.5992 | 4.111 | 4.2253 | 5.4929 | 6.7699 | 5.5532 | 6.9676 |
Translational Efficiency | 1.1817 | 0.8192 | 1.2828 | 0.743 | 1.4689 | 1.8221 | 1.1332 | 1.1424 | 1.4456 | 1.2051 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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