Standard name | |
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Human Ortholog | |
Description | Subunit of the COMPASS (Set1C) complex; COMPASS methylates lysine 4 of histone H3 and is required in chromatin silencing at telomeres; contains a Dpy-30 domain that mediates interaction with Bre2p; similar to C. elegans and human DPY-30 |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 1 |
Bud | 0 | 0 | 0 | 0 | 0 | 2 | 2 | – | 2 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 6 | 1 | 1 | 0 | 3 | 4 |
Bud Neck | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 1 | 0 | 0 | 0 | 4 | 2 | – | 7 | 9 | 10 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 12 | 6 | 6 | 6 | 19 | 29 | 27 | – | 15 | 13 | 8 | 17 | 11 | 39 | 48 | 10 | 6 | 5 | 1 | 0 | 1 | 0 | 0 | 1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 5 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 7 | 1 | 0 | 2 | 14 | 2 | 11 | – | 2 | 2 | 0 | 2 | 0 | 1 | 7 | 2 | 2 | 3 | 9 | 1 | 0 | 1 | 1 | 5 |
Golgi | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 4 | 1 | 0 | 0 | 0 | 0 |
Mitochondria | 13 | 22 | 1 | 5 | 4 | 97 | 11 | – | 53 | 86 | 62 | 73 | 2 | 0 | 0 | 11 | 10 | 6 | 4 | 1 | 0 | 0 | 0 | 3 |
Nucleus | 241 | 212 | 133 | 199 | 335 | 263 | 389 | – | 217 | 314 | 180 | 227 | 211 | 297 | 267 | 219 | 153 | 150 | 211 | 209 | 126 | 61 | 156 | 139 |
Nuclear Periphery | 0 | 0 | 2 | 0 | 6 | 3 | 0 | – | 4 | 4 | 0 | 3 | 0 | 3 | 1 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 44 | 23 | 9 | 12 | 9 | 25 | 34 | – | 44 | 59 | 43 | 49 | 19 | 19 | 13 | 21 | 11 | 14 | 52 | 22 | 18 | 12 | 31 | 43 |
Peroxisomes | 1 | 0 | 0 | 0 | 1 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 10 | 0 | 3 | 9 | 4 | 5 | 14 | – | 12 | 8 | 2 | 7 | 2 | 5 | 3 | 0 | 6 | 1 | 14 | 2 | 5 | 0 | 5 | 5 |
Vac/Vac Membrane | 7 | 1 | 2 | 2 | 10 | 8 | 7 | – | 8 | 2 | 2 | 7 | 0 | 2 | 4 | 5 | 6 | 7 | 12 | 8 | 5 | 4 | 9 | 15 |
Unique Cell Count | 288 | 233 | 146 | 215 | 378 | 351 | 460 | 291 | 392 | 224 | 317 | 224 | 344 | 334 | 253 | 175 | 170 | 325 | 252 | 162 | 83 | 211 | 227 | |
Labelled Cell Count | 337 | 266 | 157 | 236 | 402 | 438 | 497 | 366 | 500 | 309 | 398 | 245 | 367 | 349 | 276 | 199 | 190 | 325 | 252 | 162 | 83 | 211 | 227 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.1 | 5.9 | 6.5 | 6.0 | 7.3 | 5.0 | 6.1 | – | 5.3 | 5.4 | 5.1 | 5.5 | 6.9 | 6.9 | 6.8 | 8.7 | 8.8 | 8.7 | 6.0 | 6.3 | 6.4 |
Std Deviation (1e-4) | 1.4 | 1.2 | 1.0 | 1.4 | 2.3 | 1.5 | 1.7 | – | 1.9 | 1.3 | 1.6 | 1.4 | 1.7 | 1.8 | 1.9 | 1.9 | 2.2 | 2.1 | 1.5 | 1.6 | 1.5 |
Intensity Change (Log2) | – | – | – | -0.1 | 0.17 | -0.38 | -0.1 | – | -0.28 | -0.25 | -0.33 | -0.24 | 0.1 | 0.09 | 0.08 | 0.43 | 0.45 | 0.43 | -0.12 | -0.03 | -0.03 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0.4 | 1.6 | 0.8 | – | 0.5 | -0.4 | -0.3 | 0.6 | 0.4 | 2.5 | 3.3 | -0.1 | -0.3 | -0.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 6.9 | 0 | – | 5.3 | 6.0 | 6.8 | 6.1 | 0 | 0 | 0 | 0 | 2.5 | 0 |
Nucleus | 0.5 | -0.8 | -4.1 | -2.0 | – | -4.1 | -3.0 | -2.8 | -4.7 | 1.1 | -1.5 | -3.0 | -1.4 | -1.0 | -0.8 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | -0.2 | -2.1 | 0.4 | 0.5 | – | 2.7 | 2.8 | 3.5 | 2.8 | 0.8 | -0.3 | -1.1 | 0.8 | 0 | 0.7 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.8909 | 1.2511 | 1.1887 | 0.9745 | 0.4957 | 1.2922 | 1.9383 | 2.6627 | 2.3498 | 1.99 | 2.3028 | 2.431 | 3.6623 | 4.4249 | 3.6726 | 3.8307 | 3.7912 | 3.6299 |
Actin | 0.0043 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0 | 0 | 0 | 0 | 0.0007 | 0.002 | 0 | 0.014 | 0.001 | 0.0158 | 0.0004 |
Bud | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0003 | 0.0001 |
Bud Neck | 0.0006 | 0.0001 | 0.0001 | 0.0002 | 0.0009 | 0.0006 | 0.0008 | 0 | 0.0001 | 0.0001 | 0.0008 | 0.0009 | 0.0003 | 0.0001 | 0.0003 | 0.0002 | 0.0016 | 0.0018 |
Bud Periphery | 0.0002 | 0 | 0 | 0 | 0.0001 | 0 | 0.0003 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0008 | 0.0003 |
Bud Site | 0.0004 | 0 | 0 | 0 | 0.0002 | 0 | 0.0013 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0005 | 0.0001 | 0.0008 | 0.0004 |
Cell Periphery | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0001 |
Cytoplasm | 0.0034 | 0.0002 | 0.0001 | 0.0025 | 0.0001 | 0 | 0.0008 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0079 | 0.0003 | 0.0025 | 0.0003 | 0.002 | 0.0003 |
Cytoplasmic Foci | 0.0037 | 0 | 0.0007 | 0.0011 | 0 | 0 | 0.0013 | 0 | 0 | 0 | 0 | 0.0001 | 0.0169 | 0 | 0.0022 | 0.0264 | 0.0022 | 0.0002 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0028 | 0 | 0 | 0.0003 | 0 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0.0027 | 0 | 0.0001 | 0 | 0.002 | 0.0001 |
Endosome | 0.0094 | 0 | 0.0001 | 0.0011 | 0.0001 | 0.0004 | 0.0009 | 0 | 0 | 0 | 0 | 0.0002 | 0.0171 | 0.0001 | 0.0006 | 0.0033 | 0.0149 | 0.0006 |
Golgi | 0.0014 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0 | 0 | 0 | 0.0002 | 0.0012 | 0 | 0.0016 | 0.0036 | 0.0022 | 0.0001 |
Lipid Particles | 0.0039 | 0 | 0.0015 | 0.0005 | 0 | 0.0002 | 0.0014 | 0 | 0 | 0 | 0 | 0.0011 | 0.0043 | 0 | 0.0021 | 0.0298 | 0.0043 | 0.0002 |
Mitochondria | 0.0009 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0051 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0011 | 0.0012 | 0.0002 | 0.0007 | 0.0005 | 0.0017 | 0.0107 |
None | 0.0031 | 0 | 0.0001 | 0.0051 | 0.0001 | 0 | 0.0019 | 0 | 0 | 0.0001 | 0 | 0 | 0.0253 | 0.0001 | 0.0022 | 0.0004 | 0.0023 | 0.0002 |
Nuclear Periphery | 0.0138 | 0.002 | 0.0013 | 0.0037 | 0.0026 | 0.0049 | 0.001 | 0.0034 | 0.0012 | 0.0006 | 0.002 | 0.0006 | 0.0213 | 0.0019 | 0.0012 | 0.0006 | 0.0364 | 0.0014 |
Nucleolus | 0.0339 | 0.0212 | 0.0198 | 0.0181 | 0.1202 | 0.0733 | 0.0351 | 0.0234 | 0.0254 | 0.0181 | 0.0978 | 0.0712 | 0.0259 | 0.026 | 0.0327 | 0.0098 | 0.1224 | 0.0782 |
Nucleus | 0.8943 | 0.9746 | 0.9661 | 0.9443 | 0.8618 | 0.917 | 0.9381 | 0.9705 | 0.9675 | 0.9789 | 0.8399 | 0.9209 | 0.8546 | 0.9646 | 0.9286 | 0.905 | 0.729 | 0.8914 |
Peroxisomes | 0.0057 | 0 | 0.0069 | 0 | 0 | 0 | 0.001 | 0 | 0 | 0 | 0 | 0.0005 | 0.0011 | 0 | 0.0051 | 0.0175 | 0.0017 | 0.0002 |
Punctate Nuclear | 0.0162 | 0.0015 | 0.0028 | 0.0225 | 0.0133 | 0.0025 | 0.0084 | 0.0022 | 0.0053 | 0.0019 | 0.0586 | 0.002 | 0.0155 | 0.0063 | 0.0054 | 0.0013 | 0.057 | 0.012 |
Vacuole | 0.001 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0005 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0012 | 0.0001 | 0.0001 | 0.0001 | 0.0014 | 0.0005 |
Vacuole Periphery | 0.0007 | 0 | 0 | 0.0001 | 0.0001 | 0.0003 | 0.0004 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0008 | 0 | 0 | 0 | 0.0011 | 0.0008 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 24.0325 | 22.4176 | 16.6349 | 23.7502 | 12.1927 | 10.4431 | 22.6665 | 23.5849 | 18.3003 | 28.5535 |
Translational Efficiency | 1.6896 | 1.6743 | 1.6044 | 1.1677 | 3.3178 | 3.6532 | 1.6109 | 1.3693 | 1.5647 | 1.238 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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