Standard name | |
---|---|
Human Ortholog | |
Description | Subunit 7 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the mitochondrial matrix; N-terminus appears to play a role in complex assembly |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 8 | 22 | 8 | 2 | 1 | 3 | 1 | 2 | – | 3 | 1 | 1 | 16 | 20 | 16 | 14 | – | 1 | 66 | 68 | 41 | 39 | 57 | 54 |
Bud | 2 | 1 | 5 | 1 | 1 | 1 | 5 | 0 | – | 2 | 9 | 4 | 1 | 1 | 3 | 0 | – | 1 | 3 | 6 | 0 | 1 | 4 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | – | 1 | 1 | 1 | 0 | 0 | 0 | 0 | – | 0 | – | – | – | – | – | – |
Cell Periphery | 5 | 13 | 4 | 6 | 1 | 1 | 1 | 1 | – | 0 | 0 | 0 | 10 | 7 | 6 | 4 | – | 1 | 0 | 1 | 0 | 0 | 0 | 1 |
Cytoplasm | 1 | 4 | 2 | 1 | 5 | 4 | 7 | 18 | – | 8 | 8 | 8 | 5 | 1 | 6 | 1 | – | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 2 | 0 | 6 | 2 | 3 | 9 | 7 | 4 | – | 13 | 7 | 3 | 1 | 5 | 1 | 1 | – | 1 | 0 | 1 | 0 | 0 | 1 | 0 |
Endosome | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 2 | 3 | 2 | 0 | – | 0 | 7 | 11 | 3 | 6 | 8 | 5 |
Golgi | 29 | 81 | 20 | 16 | 19 | 9 | 7 | 17 | – | 19 | 11 | 8 | 96 | 90 | 178 | 33 | – | 9 | 83 | 114 | 24 | 53 | 86 | 77 |
Mitochondria | 621 | 543 | 269 | 172 | 257 | 325 | 434 | 390 | – | 338 | 395 | 423 | 323 | 309 | 305 | 3 | – | 1 | 528 | 423 | 223 | 160 | 233 | 211 |
Nucleus | 1 | 1 | 0 | 0 | 1 | 3 | 3 | 0 | – | 0 | 2 | 0 | 1 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 12 | 11 | 5 | 4 | 9 | 5 | 7 | 1 | – | 7 | 10 | 10 | 5 | 2 | 4 | 0 | – | 1 | 2 | 2 | 0 | 1 | 4 | 2 |
Nucleolus | 62 | 26 | 23 | 9 | 41 | 81 | 105 | 116 | – | 64 | 74 | 62 | 17 | 13 | 14 | 11 | – | 2 | 1 | 4 | 1 | 4 | 5 | 5 |
Peroxisomes | 10 | 8 | 17 | 7 | 3 | 1 | 4 | 1 | – | 5 | 2 | 1 | 18 | 21 | 13 | 1 | – | 1 | 30 | 22 | 34 | 37 | 48 | 35 |
SpindlePole | 1 | 0 | 0 | 0 | 1 | 0 | 3 | 1 | – | 0 | 0 | 1 | 0 | 2 | 1 | 1 | – | 1 | 0 | 2 | 2 | 1 | 2 | 0 |
Vac/Vac Membrane | 38 | 33 | 2 | 3 | 13 | 4 | 13 | 7 | – | 13 | 7 | 11 | 47 | 24 | 26 | 6 | – | 1 | 3 | 7 | 1 | 4 | 5 | 12 |
Unique Cell Count | 664 | 595 | 304 | 190 | 307 | 366 | 489 | 463 | 397 | 428 | 452 | 411 | 381 | 403 | 62 | 19 | 730 | 669 | 336 | 312 | 463 | 412 | ||
Labelled Cell Count | 792 | 743 | 361 | 223 | 356 | 446 | 598 | 560 | 473 | 527 | 533 | 542 | 498 | 575 | 76 | 24 | 730 | 669 | 336 | 312 | 463 | 412 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 29.8 | 28.5 | 22.9 | 22.4 | 22.9 | 24.4 | 23.7 | 27.1 | – | 29.9 | 30.2 | 30.1 | 27.1 | 25.2 | 24.3 | 29.3 | – | 25.0 | 33.7 | 32.9 | 34.6 |
Std Deviation (1e-4) | 8.0 | 7.0 | 8.5 | 7.9 | 8.9 | 9.3 | 10.5 | 12.0 | – | 14.3 | 13.7 | 13.8 | 6.4 | 6.4 | 5.7 | 8.1 | – | 10.2 | 12.5 | 13.2 | 12.9 |
Intensity Change (Log2) | – | – | – | -0.03 | -0.0 | 0.09 | 0.05 | 0.25 | – | 0.38 | 0.4 | 0.39 | 0.25 | 0.14 | 0.09 | 0.36 | – | 0.13 | 0.56 | 0.52 | 0.59 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0.9 | 1.7 | 1.0 | 0 | – | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | – | 0 | 0.4 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1.1 | 0 | 0 | 0 | – | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 2.7 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Endoplasmic Reticulum | 0 | 0 | 0.4 | 0 | 0 | – | 1.1 | -0.3 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Golgi | 0.8 | -0.2 | -2.6 | -3.9 | -1.8 | – | -1.0 | -2.7 | -3.4 | 6.0 | 6.0 | 11.0 | 9.5 | – | 0 |
Mitochondria | 0.7 | -1.7 | 0.1 | 0.1 | -1.7 | – | -1.3 | 1.7 | 2.5 | -3.5 | -2.6 | -4.3 | -13.7 | – | -9.5 |
Nucleus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Nuclear Periphery | 0 | 1.1 | 0 | 0 | 0 | – | 0.1 | 0.7 | 0.5 | 0 | 0 | 0 | 0 | – | 0 |
Nucleolus | -1.2 | 2.3 | 5.2 | 5.2 | 6.2 | – | 3.4 | 3.8 | 2.6 | -2.0 | -2.4 | -2.4 | 2.5 | – | 0 |
Peroxisomes | -1.0 | -3.2 | -4.2 | -4.1 | -4.8 | – | -3.3 | -4.3 | -4.7 | -0.7 | 0 | -1.5 | 0 | – | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 |
Vacuole | 0 | 2.9 | 0 | 2.0 | 0 | – | 2.4 | 0 | 1.8 | 5.6 | 3.8 | 3.9 | 0 | – | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.8512 | -0.5 | -0.5989 | -0.6307 | -0.6448 | -0.5289 | 1.7879 | 2.7817 | 2.5427 | 1.955 | 2.2033 | 2.8898 | 0.5572 | -0.5236 | -0.7281 | 0.1304 | -1.2834 | -0.3979 |
Actin | 0.0026 | 0.0003 | 0.0004 | 0.0003 | 0.0015 | 0.0003 | 0.0006 | 0.0004 | 0.0005 | 0.0003 | 0.0002 | 0.0006 | 0.0496 | 0 | 0 | 0.0523 | 0 | 0.0001 |
Bud | 0.0059 | 0.002 | 0.0042 | 0.0004 | 0.0001 | 0.0036 | 0.0004 | 0.0033 | 0.0056 | 0.0065 | 0.0013 | 0.0012 | 0.0009 | 0 | 0 | 0.0003 | 0 | 0 |
Bud Neck | 0.0073 | 0.0001 | 0.0013 | 0.0097 | 0.0094 | 0.0035 | 0.0008 | 0.0023 | 0.0005 | 0.0006 | 0.0006 | 0.0011 | 0.0199 | 0 | 0 | 0.0011 | 0 | 0 |
Bud Periphery | 0.0017 | 0.0003 | 0.0013 | 0.0002 | 0.0001 | 0.0013 | 0.0008 | 0.0036 | 0.0085 | 0.0047 | 0.0028 | 0.0034 | 0.0017 | 0 | 0 | 0.0007 | 0 | 0 |
Bud Site | 0.0247 | 0.0077 | 0.0093 | 0.0065 | 0.0008 | 0.0006 | 0.0077 | 0.0138 | 0.0036 | 0.003 | 0.0011 | 0.0001 | 0.0171 | 0 | 0 | 0.0007 | 0 | 0 |
Cell Periphery | 0.0007 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0016 | 0.0055 | 0.0024 | 0.0004 | 0.0005 | 0.0013 | 0.0032 | 0 | 0 | 0.0001 | 0 | 0 |
Cytoplasm | 0.0125 | 0.0091 | 0.0058 | 0.005 | 0.0071 | 0.0132 | 0.0199 | 0.0327 | 0.0244 | 0.0233 | 0.0117 | 0.0362 | 0.0173 | 0.0266 | 0.0192 | 0.0149 | 0.0565 | 0.0572 |
Cytoplasmic Foci | 0.005 | 0.0031 | 0.0053 | 0.003 | 0.0082 | 0.0034 | 0.0033 | 0.0043 | 0.0045 | 0.0036 | 0.0014 | 0.0018 | 0.0164 | 0.0019 | 0.0005 | 0.0061 | 0.0012 | 0.002 |
Eisosomes | 0.0004 | 0.0002 | 0.0002 | 0.0004 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0022 | 0.0001 | 0.0002 | 0.0004 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0016 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0165 | 0.0419 | 0.026 | 0.002 | 0.0355 | 0.0241 | 0.025 | 0.0003 | 0.0002 | 0.0011 | 0.0007 | 0.0002 |
Endosome | 0.0011 | 0.0002 | 0.0001 | 0.0001 | 0.0011 | 0.0001 | 0.0014 | 0.0013 | 0.0021 | 0.0009 | 0.0035 | 0.0025 | 0.0256 | 0.0001 | 0 | 0.0068 | 0.0002 | 0.0001 |
Golgi | 0.0002 | 0 | 0 | 0.0001 | 0.0009 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0068 | 0 | 0 | 0.0127 | 0 | 0 |
Lipid Particles | 0.0007 | 0.0001 | 0.0002 | 0.0002 | 0.0046 | 0.0001 | 0.001 | 0.0009 | 0.0018 | 0.0005 | 0.0004 | 0.0006 | 0.0124 | 0.0002 | 0.0001 | 0.029 | 0.0001 | 0.0001 |
Mitochondria | 0.001 | 0.0006 | 0.0003 | 0.0002 | 0.0083 | 0.0003 | 0.0003 | 0.0005 | 0.001 | 0.0004 | 0.0001 | 0.0002 | 0.0052 | 0 | 0 | 0.002 | 0 | 0 |
None | 0.916 | 0.9656 | 0.9581 | 0.9647 | 0.9177 | 0.9695 | 0.9227 | 0.8242 | 0.8801 | 0.8984 | 0.9038 | 0.8885 | 0.7039 | 0.9705 | 0.9794 | 0.8584 | 0.9405 | 0.9357 |
Nuclear Periphery | 0.0022 | 0.0011 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0048 | 0.0068 | 0.0047 | 0.008 | 0.001 | 0.0058 | 0.0424 | 0.0001 | 0.0001 | 0.0016 | 0.0001 | 0.0003 |
Nucleolus | 0.0017 | 0.0009 | 0.002 | 0.0006 | 0.0018 | 0.0002 | 0.001 | 0.0016 | 0.0025 | 0.0036 | 0.0004 | 0.0005 | 0.0102 | 0 | 0 | 0.0002 | 0 | 0.0001 |
Nucleus | 0.0096 | 0.0039 | 0.0038 | 0.0009 | 0.0013 | 0.0011 | 0.0023 | 0.0089 | 0.0069 | 0.0213 | 0.0007 | 0.0037 | 0.0104 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0002 |
Peroxisomes | 0.0008 | 0.0001 | 0.0002 | 0.0002 | 0.022 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0063 | 0 | 0 | 0.0081 | 0 | 0.0001 |
Punctate Nuclear | 0.0032 | 0.0041 | 0.0067 | 0.0069 | 0.0145 | 0.0019 | 0.0016 | 0.006 | 0.0043 | 0.0176 | 0.0002 | 0.0031 | 0.0129 | 0.0001 | 0 | 0.0025 | 0.0001 | 0.0037 |
Vacuole | 0.001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0125 | 0.0401 | 0.0189 | 0.0035 | 0.0325 | 0.023 | 0.0066 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0 |
Vacuole Periphery | 0.0002 | 0.0001 | 0 | 0 | 0 | 0 | 0.0004 | 0.0015 | 0.0013 | 0.001 | 0.0018 | 0.0019 | 0.004 | 0 | 0 | 0.0003 | 0 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 63.2159 | 43.6677 | 60.9945 | 90.7411 | 63.3344 | 57.4372 | 57.1384 | 70.9938 | 72.7438 | 72.4115 |
Translational Efficiency | 2.2088 | 2.7304 | 2.2448 | 1.6392 | 2.824 | 2.4655 | 1.9466 | 1.7188 | 2.0749 | 2.2398 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|