Standard name
Human Ortholog
Description Subunit D of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0.06 0 0 0 0 0
Bud – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery – 0 0 0 0 0 0 0 – 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm – 0 0.08 0 0.07 0.07 0.07 0.08 – 0.08 0.15 0.13 0.05 0 0 0.11 0.08 0.05 0.07 0 0 0 0 0
Endoplasmic Reticulum – 0 0 0 0 0 0 0.07 – 0.1 0.05 0.09 0 0 0 0 0 0 0 0 0 0 0 0
Endosome – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0
Golgi – 0.07 0 0 0.06 0.08 0.06 0.1 – 0.1 0 0.06 0.07 0.05 0.1 0.31 0.27 0.31 0 0 0 0 0 0
Mitochondria – 0 0.11 0.05 0.08 0.19 0.15 0.11 – 0.13 0.19 0.26 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus – 0.05 0 0 0 0 0 0 – 0 0 0 0.07 0 0 0 0 0 0 0.05 0 0.06 0.08 0.09
Nuclear Periphery – 0 0.11 0.24 0.11 0.13 0.19 0.16 – 0.16 0.15 0.15 0 0.11 0.14 0 0 0 0.05 0 0.09 0 0.05 0
Nucleolus – 0 0.06 0.05 0 0 0 0 – 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0
Peroxisomes – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane – 0.9 0.82 0.87 0.83 0.66 0.68 0.61 – 0.61 0.58 0.44 0.9 0.92 0.93 0.85 0.87 0.88 0.63 0.86 0.8 0.84 0.79 0.8
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 0 0 0 1 1 2 19 – 17 4 9 0 0 0 2 0 0 3 0 0 0 1 0
Bud – 0 0 0 0 0 1 3 – 1 2 3 0 0 0 0 0 0 0 0 3 1 3 3
Bud Neck – 0 0 0 0 0 1 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
Bud Site – 0 0 0 0 0 0 0 – 1 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery – 0 0 1 0 1 12 31 – 16 17 17 0 0 1 0 3 1 0 0 0 0 0 0
Cytoplasm – 2 12 11 29 42 57 61 – 47 51 67 9 15 18 33 18 11 3 0 3 1 6 4
Endoplasmic Reticulum – 0 0 2 1 18 24 54 – 60 18 48 2 0 0 11 8 6 1 0 0 1 1 1
Endosome – 0 0 0 1 1 1 0 – 0 0 1 0 0 0 0 0 0 4 1 0 1 1 2
Golgi – 6 3 11 25 46 46 78 – 60 13 30 14 21 53 89 62 70 1 0 0 0 1 0
Mitochondria – 0 17 14 32 107 114 85 – 80 65 131 1 1 3 4 9 9 0 0 3 1 2 3
Nucleus – 4 4 5 12 25 16 8 – 8 3 4 13 9 14 2 5 7 0 4 2 9 23 31
Nuclear Periphery – 1 17 73 46 76 144 119 – 103 52 78 1 47 71 12 10 5 2 3 15 5 13 8
Nucleolus – 2 9 14 10 17 15 16 – 2 4 2 2 6 6 7 5 11 0 2 1 1 5 14
Peroxisomes – 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
SpindlePole – 0 0 0 1 1 2 1 – 3 1 0 0 0 0 0 0 0 0 0 1 0 1 0
Vac/Vac Membrane – 74 128 261 336 384 522 462 – 380 200 225 173 397 475 246 200 196 34 83 139 131 245 294
Unique Cell Count 82 156 301 405 578 773 761 625 347 509 193 431 512 289 231 223 55 97 175 156 309 368
Labelled Cell Count 89 190 392 494 719 957 937 778 430 615 215 496 641 406 320 317 55 97 175 156 309 368


Vacuole Periphery

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) – 33.8 18.7 20.5 19.3 16.9 16.7 17.0 – 17.1 15.8 15.8 24.5 26.8 28.1 35.3 34.2 36.6 26.6 27.8 29.0
Std Deviation (1e-4) – 7.3 6.5 5.6 5.8 5.4 5.1 4.6 – 4.5 4.3 4.6 6.4 7.3 7.1 10.6 10.3 10.9 8.0 9.0 9.4
Intensity Change (Log2) – – – 0.13 0.05 -0.14 -0.17 -0.14 – -0.13 -0.24 -0.24 0.39 0.52 0.59 0.92 0.87 0.97 0.51 0.57 0.63

WT3RAP60RAP140RAP220RAP300RAP380RAP540RAP620RAP700010203040WT3HU80HU120HU160010203040WT3rpd3Δ_1rpd3Δ_2rpd3Δ_3010203040AF100AF140AF180010203040
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 2.6 – 0 2.8 0 0 0 0 0 0 0
Cytoplasm -1.9 -0.2 -0.2 -0.1 0.1 – -0.1 2.2 1.8 -1.2 -2.2 -2.2 1.2 0 -1.1
Endoplasmic Reticulum 0 0 0 0 3.4 – 4.0 2.9 4.0 0 0 0 0 0 0
Endosome 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Golgi 0 2.1 2.7 2.1 3.3 – 3.1 0 2.0 2.3 1.6 3.3 7.2 6.4 7.2
Mitochondria -2.5 -1.1 2.3 1.3 0.1 – 0.6 2.2 3.9 -4.4 0 0 -4.5 -2.7 -2.6
Nucleus 0 0 1.0 0 0 – 0 0 0 1.8 0 0 0 0 0
Nuclear Periphery 3.4 0.2 0.8 2.3 1.5 – 1.7 1.2 1.4 -4.4 0 1.0 -2.8 -2.5 -3.5
Nucleolus -0.5 -1.9 -1.7 0 0 – 0 0 0 0 0 0 -1.8 -1.9 -0.4
Peroxisomes 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Vacuole 1.3 0.3 -3.8 -3.6 -5.1 – -5.0 -5.3 -8.3 2.0 3.5 4.0 0.8 1.2 1.6

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 19.861 24.1622 22.5553 22.4021 19.519 22.693 20.7999 25.2143 23.2511 22.9605 21.2429 22.2702 21.9817 26.5133 24.1243 22.9785 21.8239 24.2889
Actin 0.001 0 0.0011 0 0.0035 0 0.0007 0 0.0008 0 0 0.0007 0.0074 0 0 0 0.0001 0
Bud 0.0002 0 0.0001 0 0.0001 0 0.0002 0 0.0007 0 0.0002 0.0001 0.0002 0 0.0001 0 0.0001 0
Bud Neck 0.0001 0 0.0001 0 0.0001 0.0001 0.0001 0 0.0001 0 0 0.0005 0.0002 0 0.0001 0.0001 0 0
Bud Periphery 0.0004 0.0001 0.0001 0 0.0004 0.0001 0.0006 0 0.0015 0 0.0007 0.0005 0.0005 0.0001 0.0004 0.0001 0.0001 0.0001
Bud Site 0.0004 0 0.0001 0 0.0004 0.0001 0.0004 0 0.0004 0 0 0.0001 0.0002 0 0.0001 0 0.0001 0
Cell Periphery 0.0009 0.0004 0.0008 0.0004 0.0005 0.0002 0.0011 0.0002 0.0012 0.0003 0.0007 0.0005 0.0012 0.0005 0.0014 0.0004 0.0003 0.0002
Cytoplasm 0.002 0.0004 0.0003 0.0001 0.0001 0.0001 0.0009 0.0002 0.0004 0.0001 0.0001 0.0006 0.0001 0.0002 0.0005 0.0001 0.0012 0
Cytoplasmic Foci 0.0093 0 0.0004 0 0.0014 0.0014 0.0063 0 0.0031 0 0 0.0003 0.0003 0 0.0025 0 0.0111 0
Eisosomes 0 0 0 0 0.0001 0 0.0002 0 0 0 0 0 0 0 0 0 0 0
Endoplasmic Reticulum 0.0009 0.0003 0.0003 0.0001 0.0003 0.0001 0.0024 0.0002 0.0003 0 0.0004 0.0026 0.0002 0.0003 0.0003 0.0001 0.0013 0.0001
Endosome 0.0111 0.0021 0.0053 0.0019 0.0053 0.002 0.0089 0.0026 0.0077 0.0017 0.0036 0.0042 0.0057 0.0034 0.006 0.0028 0.0098 0.001
Golgi 0.0011 0 0.0006 0 0.002 0.0001 0.0005 0 0.0017 0 0 0.0002 0.0013 0.0001 0.0004 0.0002 0.0011 0.0001
Lipid Particles 0.0066 0.0001 0.0016 0 0.008 0.002 0.0029 0 0.0016 0 0.0002 0.0003 0.0011 0.0001 0.0008 0.0002 0.0374 0.0014
Mitochondria 0.0055 0.002 0.0031 0.0003 0.0062 0.0003 0.0087 0.0001 0.0048 0 0.0003 0.0018 0.009 0.006 0.0076 0.0005 0.0015 0.001
None 0.0025 0 0.0001 0 0.0002 0 0.0009 0 0.0002 0 0 0.0003 0 0 0.0002 0 0.0009 0
Nuclear Periphery 0.0129 0.0172 0.0121 0.0018 0.003 0.0181 0.0162 0.0073 0.0061 0.0014 0.0085 0.0127 0.0079 0.0096 0.01 0.0091 0.006 0.0153
Nucleolus 0.0024 0.0002 0.0006 0.0008 0.0008 0.0027 0.0012 0.0001 0.0026 0.0001 0.0003 0.0003 0.0013 0.0003 0.0031 0.0003 0.0007 0.0003
Nucleus 0.003 0.0007 0.0009 0.0006 0.0013 0.0008 0.0032 0.0003 0.0019 0.0002 0.0007 0.0008 0.0019 0.0004 0.0073 0.0008 0.0009 0.0004
Peroxisomes 0.0039 0 0.0007 0 0.0054 0.0001 0.001 0 0.0022 0 0 0 0.0002 0 0.0001 0 0.0006 0
Punctate Nuclear 0.0051 0 0.0001 0 0.0002 0.0001 0.0009 0 0.0013 0 0 0.0001 0 0 0.0013 0 0.0014 0
Vacuole 0.2667 0.2676 0.2897 0.2599 0.271 0.1893 0.2705 0.236 0.2907 0.2584 0.2115 0.1568 0.2891 0.2691 0.2879 0.2646 0.3002 0.1094
Vacuole Periphery 0.664 0.7088 0.6819 0.7339 0.6897 0.7822 0.6721 0.7528 0.6708 0.7377 0.7725 0.8166 0.6719 0.7099 0.67 0.7205 0.6254 0.8707

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 196.7809 212.3715 204.106 224.1058 228.2299 198.8175 221.5197 242.7097 229.4592 217.5305
Translational Efficiency 1.7458 1.705 1.6745 1.5001 1.5268 1.5731 1.5729 1.2867 1.4981 1.5361

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1983 1511 2894 94 2027 631 2795 775 4010 2142 5689 869

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1850.52 2248.18 2849.08 2902.15 1881.27 2151.10 2754.52 2740.12 1866.06 2219.58 2802.62 2757.65
Standard Deviation 401.08 553.47 593.49 823.16 473.21 447.51 580.29 776.89 439.29 526.35 588.94 783.64
Intensity Change Log 2 — 0.280827 0.622565 0.649191 — 0.193368 0.550094 0.542532 — 0.237400 0.586486 0.596408

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000016 0.000030 0.000020 0.000179 0.000012 0.000067 0.000022 0.000145 0.000014 0.000040 0.000021 0.000148
Bud Neck 0.000088 0.000193 0.000351 0.003120 0.000064 0.000177 0.000428 0.001108 0.000076 0.000189 0.000389 0.001326
Bud Site 0.000387 0.000287 0.000381 0.002590 0.000466 0.000887 0.000309 0.002226 0.000427 0.000464 0.000345 0.002265
Cell Periphery 0.000795 0.001101 0.002282 0.000911 0.001292 0.000322 0.004199 0.002351 0.001047 0.000871 0.003224 0.002195
Cytoplasm 0.000422 0.000110 0.000023 0.005751 0.001732 0.000440 0.000091 0.000203 0.001084 0.000207 0.000057 0.000804
Cytoplasmic Foci 0.000364 0.000533 0.000217 0.008247 0.000595 0.000589 0.000366 0.001645 0.000481 0.000550 0.000290 0.002359
Eisosomes 0.000002 0.000010 0.000072 0.000067 0.000001 0.000007 0.000141 0.000069 0.000002 0.000009 0.000106 0.000069
Endoplasmic Reticulum 0.000190 0.000195 0.000292 0.000178 0.000272 0.000158 0.000344 0.000237 0.000231 0.000184 0.000317 0.000231
Endosome 0.000613 0.000590 0.000277 0.003333 0.001255 0.000676 0.000291 0.001752 0.000937 0.000615 0.000283 0.001923
Golgi 0.007912 0.002016 0.000768 0.003418 0.007928 0.002288 0.000492 0.005844 0.007920 0.002096 0.000633 0.005582
Lipid Particles 0.000233 0.000487 0.001352 0.001141 0.000256 0.000582 0.001594 0.001084 0.000245 0.000515 0.001471 0.001090
Mitochondria 0.001500 0.001127 0.000774 0.003912 0.000185 0.001926 0.001087 0.008288 0.000835 0.001363 0.000928 0.007815
Mitotic Spindle 0.000157 0.000389 0.000007 0.001118 0.000016 0.000305 0.000010 0.000484 0.000086 0.000365 0.000008 0.000553
None 0.000164 0.000252 0.000161 0.000310 0.000151 0.000101 0.000228 0.000451 0.000157 0.000207 0.000194 0.000436
Nuclear Periphery 0.000305 0.000461 0.000408 0.001919 0.000112 0.000958 0.000457 0.001527 0.000207 0.000607 0.000432 0.001569
Nuclear Periphery Foci 0.000192 0.000493 0.000199 0.001149 0.000196 0.000569 0.000225 0.000709 0.000194 0.000515 0.000211 0.000757
Nucleolus 0.000392 0.001334 0.002558 0.012515 0.000246 0.001025 0.003893 0.005949 0.000318 0.001243 0.003214 0.006659
Nucleus 0.000165 0.000471 0.000698 0.002677 0.000103 0.000155 0.001198 0.000923 0.000134 0.000378 0.000943 0.001113
Peroxisomes 0.000016 0.000037 0.000033 0.000404 0.000009 0.000631 0.000063 0.000119 0.000012 0.000212 0.000048 0.000150
Vacuole 0.131758 0.175805 0.367530 0.329241 0.129691 0.165323 0.401713 0.315360 0.130713 0.172717 0.384324 0.316862
Vacuole Periphery 0.854330 0.814078 0.621598 0.617818 0.855418 0.822813 0.582848 0.649525 0.854880 0.816652 0.602560 0.646095

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -1.97 -0.99 -2.03 -1.90 -1.98 -1.36 -2.15 -3.57 -1.33 -3.32 -2.04 -2.21 -4.01 -3.04 -3.82
Bud Neck -1.56 -3.60 -2.64 -2.58 -2.48 -2.28 -2.88 -6.22 -5.36 -3.28 -2.44 -4.34 -5.87 -5.35 -4.41
Bud Site 1.05 0.04 -2.46 -2.54 -2.45 -0.56 1.54 -2.44 -1.28 -2.67 -0.16 0.93 -2.93 -2.72 -3.05
Cell Periphery -1.82 -8.16 -0.49 0.49 4.07 6.54 -6.96 -1.68 -3.29 2.53 1.33 -9.64 -2.07 -2.38 1.73
Cytoplasm 1.55 2.01 -1.03 -1.09 -1.11 1.68 2.55 2.36 0.56 -1.08 2.43 3.02 0.32 -1.04 -1.31
Cytoplasmic Foci -0.97 2.32 -1.23 -1.21 -1.25 -0.02 1.36 -2.40 -2.18 -2.99 -0.47 2.13 -2.29 -2.19 -2.51
Eisosomes -6.49 -15.36 -2.52 -2.23 0.17 -3.04 -14.67 -6.70 -6.05 5.14 -7.49 -19.86 -7.09 -6.31 3.39
Endoplasmic Reticulum -0.15 -3.59 0.01 0.09 1.62 1.45 -2.64 0.66 -0.90 2.19 1.29 -4.38 -0.03 -0.91 1.98
Endosome 0.11 3.81 -1.04 -1.05 -1.17 1.34 4.23 -0.89 -1.71 -2.85 1.58 5.31 -1.79 -2.33 -3.05
Golgi 4.62 5.94 2.43 -1.09 -2.07 5.00 8.11 1.28 -2.39 -4.02 6.97 9.66 1.64 -2.80 -4.14
Lipid Particles -7.29 -20.97 -1.84 -1.35 0.30 -1.01 -21.06 -5.55 -1.11 3.31 -2.49 -29.46 -6.01 -3.15 2.56
Mitochondria 0.70 1.34 -0.93 -1.10 -1.24 -1.39 -4.58 -4.20 -2.77 -3.71 -1.11 -0.30 -3.96 -3.61 -3.94
Mitotic Spindle -0.79 1.65 -1.07 -0.78 -1.25 -1.55 1.46 -1.56 -0.48 -1.58 -1.35 1.71 -1.61 -0.54 -1.91
None -1.08 0.12 -1.70 -0.62 -1.82 1.07 -1.65 -3.94 -5.56 -3.53 -0.84 -1.28 -4.52 -2.99 -4.31
Nuclear Periphery -1.37 -1.87 -1.73 -1.56 -1.62 -2.48 -3.13 -3.45 -1.07 -2.53 -3.13 -3.69 -3.59 -2.41 -2.97
Nuclear Periphery Foci -2.31 -0.26 -2.37 -1.57 -2.36 -1.76 -0.45 -3.54 -0.53 -3.51 -2.85 -0.51 -4.29 -1.43 -4.24
Nucleolus -4.26 -11.81 -2.19 -2.02 -1.80 -2.45 -8.72 -5.76 -4.74 -1.93 -5.14 -12.83 -5.94 -5.01 -3.18
Nucleus -1.65 -6.78 -2.83 -2.50 -2.31 -1.14 -8.90 -5.60 -5.05 1.42 -1.90 -11.18 -5.91 -3.65 -1.18
Peroxisomes -2.01 -2.31 -1.92 -1.82 -1.84 -1.02 -11.09 -5.58 0.87 -2.78 -1.10 -8.06 -4.73 0.42 -3.55
Vacuole -7.66 -41.14 -7.33 -5.70 1.21 -4.49 -47.23 -20.72 -13.57 8.96 -9.21 -62.35 -22.35 -16.22 7.70
Vacuole Periphery 6.44 38.46 8.01 6.66 0.43 3.77 44.34 20.99 14.42 -6.44 7.70 58.42 22.96 17.69 -4.50
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Subunit D of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits
Localization
Cell Percentages vacuolar membrane (95%)
Cell Cycle Regulation No
Subcompartmental Group vac memb-2

Vma8

Vma8


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Vma8-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available