Standard name
Human Ortholog
Description Protein with a role in cellular adhesion and filamentous growth; similar to Emp70p and Tmn2p; member of Transmembrane Nine family with 9 transmembrane segments; localizes to Golgi; induced by 8-methoxypsoralen plus UVA irradiation

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0.05 0 0 0 0 0 0 0 0 0 0.19 0.15 0.07 0.07 0.06 0.08 0 0 0 0 0 0.05
Bud 0 0 0 0.05 0.07 0.05 0.09 0.07 0.09 0.09 0.1 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0.05 0 0 0.06 0 0.05 0 0 0 0 0.05 0 0.06 0.25 0.28 0.23 0 0 0 0 0 0
Endoplasmic Reticulum 0 0.05 0 0 0 0 0 0 0 0 0 0.06 0.09 0 0 0.05 0 0 0 0 0 0 0
Endosome 0.34 0.05 0.26 0.33 0.41 0.22 0.25 0.17 0 0 0.06 0.27 0.2 0.31 0.34 0.31 0.46 0.26 0.37 0.25 0.2 0.18 0.15
Golgi 0.23 0.05 0.17 0.08 0.06 0 0 0 0 0 0 0.38 0.5 0.38 0 0 0.1 0.54 0.38 0.46 0.52 0.55 0.59
Mitochondria 0.6 0.86 0.61 0.65 0.45 0.69 0.58 0.65 0.87 0.9 0.84 0.26 0.19 0.18 0.13 0.15 0.09 0.07 0.13 0 0 0.05 0.08
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0.06 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0.11 0.08 0.16 0.2 0.33 0.21 0.13 0.05 0.14 0 0 0 0 0.09 0 0.08 0.06 0.2 0.18 0.16 0.09
SpindlePole 0.07 0 0.05 0.07 0.09 0.1 0.18 0.14 0.1 0.07 0.12 0.08 0.06 0.07 0.31 0.31 0.11 0 0 0 0 0 0
Vac/Vac Membrane 0.05 0 0 0 0 0 0 0 0 0 0 0.06 0.05 0.12 0.06 0.08 0.15 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 8 19 5 2 5 1 0 4 1 7 2 30 37 16 17 12 11 2 2 16 10 16 28
Bud 4 12 10 11 25 26 75 70 62 62 76 4 3 4 3 3 1 0 1 0 2 0 0
Bud Neck 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 3 10 6 7 12 10 0 0 0 1 0 0
Cell Periphery 0 0 0 0 0 2 4 2 3 3 3 1 2 0 1 0 0 0 0 0 0 0 0
Cytoplasm 4 18 16 10 23 11 40 38 19 25 19 8 10 14 59 58 31 0 2 0 0 0 1
Endoplasmic Reticulum 8 19 8 2 5 5 4 4 4 10 2 10 22 8 10 11 5 0 1 0 0 2 9
Endosome 71 19 98 80 146 122 200 159 22 11 44 43 50 73 80 64 62 61 137 102 77 90 76
Golgi 47 19 64 19 23 4 1 1 1 2 5 61 122 87 2 3 13 126 141 190 195 274 304
Mitochondria 125 302 228 158 159 387 463 607 634 606 653 42 47 42 30 30 12 16 48 11 16 24 44
Nucleus 0 1 1 0 0 2 2 4 2 0 0 0 1 1 15 12 3 0 1 0 0 0 0
Nuclear Periphery 0 3 2 2 0 3 0 4 1 2 1 1 0 1 0 1 2 0 0 0 0 0 0
Nucleolus 3 5 5 3 3 6 8 21 7 10 5 1 0 1 0 2 0 0 0 0 0 0 0
Peroxisomes 3 2 41 20 58 112 265 200 96 37 109 3 3 3 2 19 0 18 23 83 68 77 46
SpindlePole 15 13 20 17 31 56 147 127 73 47 95 13 15 17 74 63 15 2 5 2 1 3 1
Vac/Vac Membrane 10 8 10 1 6 9 21 13 10 7 12 9 11 27 15 17 20 2 7 0 0 3 1
Unique Cell Count 208 353 371 244 356 564 798 939 728 677 782 162 244 232 236 205 134 235 376 413 376 496 519
Labelled Cell Count 298 441 508 325 484 749 1240 1260 942 841 1036 226 323 294 311 295 175 235 376 413 376 496 519


Early Golgi, Golgi

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 6.4 5.9 6.3 6.0 5.8 4.7 4.7 4.7 4.0 4.2 4.2 7.7 7.9 8.0 5.5 6.0 7.4 8.4 8.2 8.9
Std Deviation (1e-4) 0.7 1.1 1.3 1.1 1.4 0.8 2.9 1.2 0.9 0.8 0.8 0.9 0.9 0.9 1.4 1.7 1.8 1.4 1.0 1.7
Intensity Change (Log2) -0.08 -0.14 -0.42 -0.43 -0.44 -0.65 -0.59 -0.59 0.28 0.31 0.33 -0.2 -0.07 0.23 0.41 0.37 0.49

WT3RAP60RAP140RAP220RAP300RAP380RAP540RAP620RAP7000510WT3HU80HU120HU1600510WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30510WT1AF100AF140AF1800510
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 7.4 6.6 3.6 3.8 3.1 0
Bud 1.2 2.7 0 0 0 0 0 0 0 -1.2 -0.8 -1.2 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -0.1 1.3 -2.1 0.5 -0.2 -1.5 -0.5 -1.7 0.3 -0.1 0.9 7.6 8.2 6.4
Endoplasmic Reticulum 0 -0.8 0 0 0 0 0 0 2.4 3.9 1.0 1.5 2.1 0
Endosome 1.7 4.2 0 0 0 0 0 0 0 -1.7 1.3 2.0 1.2 4.2
Golgi -3.4 -4.5 0 0 0 0 0 0 5.1 8.7 5.6 -6.3 -5.7 -2.1
Mitochondria 0.8 -4.5 0 0 0 0 0 0 -7.5 -10.3 -10.4 -11.8 -10.8 -10.4
Nucleus 0 0 0 0 0 0 0 0 0 0 0 4.6 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes -1.2 2.1 0 0 0 0 0 0 -3.5 -4.6 -4.5 -4.8 -0.7 -4.0
SpindlePole 0.8 1.8 0 0 0 0 0 0 1.2 0.4 1.0 8.6 8.3 2.3
Vacuole 0 -0.9 -1.2 -0.1 -1.6 -1.6 -2.0 -1.3 1.6 1.2 4.5 2.2 3.0 5.1

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 2.5488 3.3919 3.0865 3.531 2.8121 3.2841 3.5537 4.3383 3.8981 3.5569 3.6918 3.8688 2.6452 4.0718 3.5055 3.2896 3.236 3.3414
Actin 0.0418 0.0087 0.0133 0.002 0.0053 0.0279 0.0283 0.0086 0.0352 0.0433 0.0222 0.0335 0.0331 0.0173 0.0184 0.001 0.0007 0.0281
Bud 0.0002 0.0001 0.0002 0.0001 0.0001 0.0002 0.0001 0.0005 0.0003 0.0051 0.0001 0.0001 0.0001 0.0002 0.0001 0 0 0.0001
Bud Neck 0.0019 0.0003 0.0004 0.0003 0.0003 0.0009 0.0002 0.0002 0.0004 0.0021 0.0002 0.0004 0.0003 0.0003 0.0003 0.0001 0.0001 0.0005
Bud Periphery 0.0002 0.0001 0.0002 0 0.0001 0.0001 0.0001 0.0006 0.0003 0.0102 0.0001 0.0001 0.0001 0.0001 0.0001 0 0 0.0001
Bud Site 0.0008 0.0004 0.0005 0.0001 0.0002 0.0003 0.0004 0.0037 0.002 0.0037 0.0003 0.0002 0.0006 0.0006 0.0006 0.0001 0 0.0002
Cell Periphery 0.0002 0 0.0001 0 0 0.0001 0.0001 0.0003 0.0001 0.0004 0 0 0 0 0 0 0 0
Cytoplasm 0.005 0.0044 0.0029 0.002 0.0009 0.0036 0.0125 0.0137 0.0038 0.0018 0.0012 0.0016 0.0024 0.0014 0.0014 0.0007 0.0009 0.0027
Cytoplasmic Foci 0.1241 0.202 0.1618 0.114 0.147 0.132 0.1346 0.1898 0.1642 0.146 0.2041 0.1512 0.1762 0.2467 0.1558 0.1838 0.1676 0.1549
Eisosomes 0.0003 0 0 0 0 0.0001 0.0001 0.0001 0.0003 0.0006 0.0001 0.0001 0.0001 0 0.0001 0 0 0
Endoplasmic Reticulum 0.0059 0.0007 0.0008 0.0007 0.0003 0.0007 0.0009 0.0018 0.0006 0.001 0.0002 0.0003 0.0002 0.0001 0.0002 0.0002 0.0004 0.0003
Endosome 0.2124 0.2601 0.2276 0.3492 0.2179 0.185 0.1719 0.1528 0.1875 0.2197 0.1813 0.1453 0.1442 0.1731 0.1756 0.1619 0.2512 0.1366
Golgi 0.373 0.4255 0.4785 0.4838 0.5316 0.5103 0.3426 0.5038 0.4379 0.3985 0.3682 0.4577 0.329 0.3654 0.4756 0.4255 0.486 0.453
Lipid Particles 0.0961 0.0297 0.0293 0.0245 0.0249 0.0477 0.0928 0.0376 0.0236 0.0442 0.0608 0.0649 0.0732 0.0266 0.026 0.0862 0.0348 0.0535
Mitochondria 0.0162 0.0066 0.0239 0.0068 0.0095 0.0234 0.0124 0.0126 0.0326 0.0753 0.0035 0.0125 0.0131 0.0051 0.0173 0.0045 0.004 0.0086
None 0.0034 0.0085 0.0001 0.0001 0.0001 0.0002 0.0003 0.0118 0.0008 0.0003 0.0003 0.0002 0.0003 0.0001 0.0001 0 0 0.001
Nuclear Periphery 0.0086 0.0002 0.0003 0.0002 0.0001 0.0002 0.0087 0.0005 0.0002 0.0008 0.0001 0.0001 0.0001 0 0.0001 0.0001 0.0001 0.0001
Nucleolus 0.0004 0.0001 0 0 0 0 0.0001 0.0002 0.0001 0.0002 0 0 0 0 0 0 0 0
Nucleus 0.0046 0.0001 0.0001 0 0 0.0001 0.0147 0.0004 0.0001 0.0005 0 0 0 0 0 0 0 0
Peroxisomes 0.0938 0.0504 0.056 0.0097 0.0598 0.0647 0.1757 0.0561 0.1081 0.0315 0.1553 0.1298 0.2253 0.1617 0.1264 0.1348 0.0519 0.1585
Punctate Nuclear 0.0074 0.0004 0.0003 0.0001 0.0002 0.0004 0.001 0.0004 0.0004 0.0002 0.0011 0.0003 0.0005 0.0003 0.0002 0.0002 0.0002 0.0004
Vacuole 0.002 0.0009 0.002 0.0028 0.0006 0.0011 0.0011 0.0034 0.0008 0.0095 0.0003 0.0006 0.0005 0.0004 0.0008 0.0003 0.0007 0.0005
Vacuole Periphery 0.0017 0.0009 0.0018 0.0034 0.0012 0.0013 0.0014 0.0013 0.001 0.0051 0.0004 0.0012 0.0006 0.0004 0.0008 0.0005 0.0011 0.0007

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 26.0114 17.2069 15.529 27.0846 29.0035 16.6381 22.5703 22.8501 20.045 33.3831
Translational Efficiency 0.5019 0.4525 0.6229 0.3444 0.3806 0.7597 0.449 0.3338 0.3957 0.3494

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
413 1932 250 1234 1294 2363 3236 1916 1707 4295 3486 3150

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 957.47 904.29 1115.65 990.50 878.65 843.58 996.05 989.28 897.72 870.89 1004.63 989.76
Standard Deviation 121.59 118.59 119.63 131.87 99.10 104.16 120.87 125.36 110.28 114.92 124.66 127.95
Intensity Change Log 2 -0.082442 0.220585 0.048930 -0.058764 0.180930 0.171090 -0.071062 0.201745 0.108680

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.019474 0.001146 0.013492 0.035037 0.001051 0.000686 0.037843 0.002981 0.005508 0.000893 0.036097 0.015539
Bud Neck 0.002650 0.000121 0.000573 0.002461 0.000038 0.000183 0.000147 0.001469 0.000670 0.000155 0.000177 0.001858
Bud Site 0.021761 0.000312 0.004919 0.024668 0.000324 0.000518 0.003459 0.007290 0.005511 0.000426 0.003564 0.014098
Cell Periphery 0.000123 0.000016 0.000060 0.000105 0.000007 0.000032 0.000049 0.000033 0.000035 0.000025 0.000050 0.000062
Cytoplasm 0.012696 0.000537 0.001242 0.019937 0.000468 0.001426 0.004315 0.011220 0.003427 0.001026 0.004095 0.014635
Cytoplasmic Foci 0.301483 0.311109 0.432074 0.329857 0.169516 0.232011 0.200393 0.304044 0.201445 0.267592 0.217008 0.314156
Eisosomes 0.000121 0.000027 0.000047 0.000116 0.000041 0.000036 0.000140 0.000028 0.000060 0.000032 0.000133 0.000063
Endoplasmic Reticulum 0.001381 0.000252 0.000926 0.001968 0.000020 0.000114 0.000229 0.000341 0.000349 0.000176 0.000279 0.000979
Endosome 0.291376 0.170354 0.193363 0.256163 0.146456 0.280717 0.272451 0.384468 0.181519 0.231073 0.266779 0.334205
Golgi 0.194004 0.482620 0.254458 0.184768 0.664625 0.409281 0.451504 0.189088 0.550761 0.442271 0.437373 0.187395
Lipid Particles 0.011020 0.009616 0.010849 0.016441 0.003529 0.037016 0.004599 0.011343 0.005342 0.024691 0.005048 0.013340
Mitochondria 0.003288 0.005260 0.000634 0.001361 0.008246 0.015990 0.004711 0.003668 0.007047 0.011163 0.004419 0.002764
Mitotic Spindle 0.016243 0.002424 0.051623 0.020724 0.000237 0.002069 0.001631 0.025966 0.004110 0.002229 0.005216 0.023912
None 0.000013 0.000015 0.000006 0.000016 0.000006 0.000340 0.000010 0.000070 0.000008 0.000194 0.000010 0.000049
Nuclear Periphery 0.000112 0.000018 0.000218 0.000110 0.000002 0.000028 0.000013 0.000188 0.000029 0.000023 0.000028 0.000158
Nuclear Periphery Foci 0.001728 0.000169 0.001981 0.001918 0.000007 0.000219 0.000060 0.001039 0.000423 0.000197 0.000198 0.001384
Nucleolus 0.000160 0.000038 0.000008 0.000036 0.000002 0.000072 0.000002 0.000107 0.000040 0.000057 0.000002 0.000079
Nucleus 0.000284 0.000032 0.000046 0.000380 0.000012 0.000532 0.000024 0.000584 0.000078 0.000307 0.000026 0.000504
Peroxisomes 0.055783 0.012658 0.016387 0.045796 0.003911 0.014633 0.014874 0.013174 0.016461 0.013745 0.014982 0.025954
Vacuole 0.059651 0.001947 0.014749 0.055577 0.000675 0.002147 0.002493 0.039349 0.014944 0.002057 0.003372 0.045706
Vacuole Periphery 0.006650 0.001328 0.002345 0.002560 0.000827 0.001948 0.001052 0.003549 0.002236 0.001669 0.001144 0.003162

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 4.13 0.94 -2.72 -10.02 -3.84 1.34 -15.10 -3.27 -3.94 14.00 4.17 -12.20 -5.60 -10.48 7.97
Bud Neck 3.06 2.50 -0.25 -9.85 -7.96 -4.72 -5.81 -5.75 -5.19 -5.32 2.54 2.41 -5.04 -9.77 -9.68
Bud Site 6.62 5.11 -0.73 -12.14 -9.13 -0.72 -7.25 -8.45 -8.16 -4.35 6.13 2.33 -6.80 -14.47 -10.58
Cell Periphery 4.27 2.29 0.37 -7.50 -3.05 -4.59 -9.47 -5.21 -0.50 1.99 1.38 -2.20 -3.62 -5.99 -1.99
Cytoplasm 6.43 5.99 -3.62 -10.85 -10.42 -2.41 -6.05 -8.81 -8.02 -5.34 4.74 -1.10 -10.47 -13.31 -9.41
Cytoplasmic Foci -1.43 -8.73 -1.85 -0.78 8.36 -13.38 -7.21 -23.63 -12.27 -19.36 -15.17 -3.58 -21.38 -8.87 -20.13
Eisosomes 5.31 3.72 0.16 -9.21 -5.32 0.96 -12.31 2.67 2.18 15.21 5.05 -8.76 -0.46 -7.03 9.15
Endoplasmic Reticulum 2.80 1.08 -1.19 -3.42 -2.17 -2.66 -8.04 -6.42 -3.94 -2.08 1.49 0.60 -3.11 -3.97 -3.62
Endosome 10.41 6.52 3.52 -11.02 -4.55 -23.42 -26.80 -35.09 -13.44 -16.47 -10.30 -17.52 -25.16 -18.01 -11.28
Golgi -26.18 -4.03 1.37 40.98 5.81 36.38 33.49 70.24 33.56 44.00 14.09 14.59 48.65 52.14 48.87
Lipid Particles 0.71 0.10 -2.72 -4.83 -2.77 -12.86 -1.21 -5.63 9.46 -5.79 -11.68 0.29 -7.17 6.37 -9.28
Mitochondria -1.92 2.94 2.20 5.16 -1.71 -4.52 3.00 4.06 8.21 1.38 -3.62 2.66 5.03 9.27 2.60
Mitotic Spindle 3.95 -3.38 -1.74 -8.27 2.71 -4.58 -4.25 -11.25 -10.43 -10.59 2.14 -0.89 -11.15 -13.25 -10.84
None -0.35 2.71 -1.75 -0.77 -3.12 -1.72 -1.08 -3.21 1.33 -3.04 -1.75 -0.75 -3.50 1.26 -3.35
Nuclear Periphery 2.75 -1.33 -1.05 -6.15 0.78 -5.31 -2.60 -5.73 -5.12 -5.42 0.80 0.15 -6.36 -6.91 -6.57
Nuclear Periphery Foci 2.07 0.18 -0.33 -5.06 -0.71 -4.97 -5.17 -7.69 -5.93 -7.24 1.41 1.36 -3.65 -7.15 -7.05
Nucleolus 1.01 1.29 0.92 -0.45 -4.41 -3.81 -0.50 -5.75 -1.90 -5.73 -0.56 1.32 -1.88 -1.91 -6.87
Nucleus 3.49 2.84 -2.27 -3.46 -3.30 -1.81 -1.90 -3.63 -0.43 -3.40 -1.33 1.38 -4.51 -2.28 -4.78
Peroxisomes 7.61 5.95 1.70 -9.59 -5.96 -9.55 -8.99 -8.59 1.00 1.07 1.48 0.71 -4.65 -7.42 -6.14
Vacuole 8.57 6.38 -0.84 -16.11 -11.07 -6.64 -6.45 -16.60 -16.08 -15.77 7.49 6.60 -12.75 -22.60 -21.77
Vacuole Periphery 2.43 1.91 1.89 -2.67 -0.14 -4.26 -1.66 -7.49 -3.78 -7.16 0.97 1.99 -1.51 -4.80 -7.46
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Componentsactinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Protein with a role in cellular adhesion and filamentous growth; similar to Emp70p and Tmn2p; member of Transmembrane Nine family with 9 transmembrane segments; localizes to Golgi; induced by 8-methoxypsoralen plus UVA irradiation
Localization
Cell Percentages Golgi (44%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Tmn3

Tmn3


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Tmn3-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available