Standard name
Human Ortholog
Description ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0 0 0 0 0 0
Cytoplasm 0.98 0.97 0.97 0.88 0.81 0.79 0.65 0.6 0.63 0.57 0.54 0.51 1.0 0.99 0.99 0.96 0.96 0.95 0.94 0.86 0.88 0.94 0.92 0.88
Endoplasmic Reticulum 0 0 0 0 0 0.06 0 0 0.06 0.05 0 0 0 0 0 0.05 0 0.06 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0.05 0.08 0.15 0.26 0.22 0.35 0.41 0.46 0.48 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0.06 0.11 0 0.15 0.25 0.07 0.09 0.11 0.08 0 0 0 0 0 0.05 0 0.07 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 1 1 0 1 2 1 1 5 3 0 2 0 0 0 0 1 0 0 0 0 4 0 1 3
Bud 1 0 3 1 3 2 3 8 3 6 3 8 0 0 0 0 0 0 0 0 2 0 0 2
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2
Bud Site 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 – – – – – –
Cell Periphery 4 10 13 6 8 8 12 11 9 11 7 5 6 2 5 5 6 8 0 0 1 0 0 1
Cytoplasm 284 251 448 232 260 393 355 381 259 256 117 132 419 334 457 169 138 101 271 229 433 230 330 341
Endoplasmic Reticulum 0 4 4 4 4 29 4 8 23 22 8 6 1 1 2 8 4 6 1 2 17 1 2 7
Endosome 0 0 0 3 5 6 24 20 4 5 7 4 0 1 0 0 0 1 2 1 8 0 5 3
Golgi 1 0 0 1 1 1 1 0 1 0 0 0 0 1 1 1 0 1 1 2 1 0 0 2
Mitochondria 2 0 6 13 27 76 143 141 143 185 99 125 0 0 2 2 1 1 0 1 2 3 2 3
Nucleus 2 10 0 3 2 1 5 6 8 4 1 5 2 1 0 4 2 0 2 3 1 0 2 1
Nuclear Periphery 0 0 0 4 0 1 2 2 3 8 1 2 0 0 0 0 0 0 1 2 3 0 2 0
Nucleolus 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 1 2
Vac/Vac Membrane 4 0 6 17 37 22 80 159 30 41 23 21 0 0 2 5 6 5 3 18 4 4 4 8
Unique Cell Count 289 259 460 264 322 497 543 640 414 450 215 259 421 337 461 176 144 106 289 266 494 246 359 388
Labelled Cell Count 299 276 480 285 349 540 631 743 487 539 269 309 428 340 469 195 157 124 289 266 494 246 359 388


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 10.4 13.0 11.1 10.4 9.7 8.6 7.6 7.5 7.3 6.6 6.6 6.3 12.4 12.2 11.8 12.5 16.9 16.7 11.0 10.9 12.9
Std Deviation (1e-4) 1.5 2.5 1.7 1.7 1.6 1.5 1.4 1.5 1.4 1.2 1.3 1.2 1.9 1.6 1.6 3.4 4.2 4.6 2.0 1.8 2.4
Intensity Change (Log2) – – – -0.1 -0.19 -0.36 -0.55 -0.56 -0.61 -0.75 -0.74 -0.83 0.16 0.14 0.09 0.17 0.61 0.59 -0.02 -0.02 0.22

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP70005101520WT3HU80HU120HU16005101520WT3rpd3Δ_1rpd3Δ_2rpd3Δ_305101520WT1AF100AF140AF18005101520
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery -0.4 -0.3 -1.3 -0.6 -1.2 -0.6 -0.4 0.3 -0.7 -1.4 -2.3 -1.9 0 0 0
Cytoplasm -5.2 -7.8 -8.7 -12.6 -14.4 -13.1 -14.6 -14.1 -15.1 2.5 1.8 2.0 -0.9 -1.0 -1.1
Endoplasmic Reticulum 0 0 4.2 0 0.6 4.0 3.6 0 0 0 0 0 0 0 0
Endosome 0 0 0 4.6 3.8 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 2.9 4.8 7.7 11.1 10.0 13.0 14.7 14.9 15.7 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 3.8 6.1 2.9 7.6 10.8 4.4 5.3 5.6 4.6 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 5.2312 8.6481 8.4827 8.9113 7.7402 8.6217 8.2799 10.7466 8.678 8.9225 9.0628 9.3322 10.1571 12.3469 10.6852 10.6903 10.6766 11.3102
Actin 0.2079 0.002 0.0011 0.0047 0.0008 0.0007 0.0711 0.0004 0.052 0.0036 0.0005 0.0017 0.0204 0.0003 0.0194 0.002 0.0341 0.0015
Bud 0.0019 0.0002 0.0004 0.0004 0.0006 0.0001 0.0005 0.0001 0.0026 0.0166 0.0001 0.0001 0.0016 0.0001 0.0032 0.0003 0.0001 0.0001
Bud Neck 0.0014 0.0003 0.0006 0.0011 0.0016 0.001 0.0022 0.0001 0.0008 0.0004 0.0005 0.0011 0.0018 0.0001 0.0017 0.0012 0.0004 0.0015
Bud Periphery 0.0025 0.0001 0.0001 0.0001 0.0003 0 0.0005 0 0.0019 0.0474 0 0 0.0013 0 0.0014 0.0007 0 0
Bud Site 0.0064 0.001 0.0006 0.0004 0.0002 0.0001 0.0011 0.0004 0.0128 0.0005 0.0001 0.0001 0.0014 0.0003 0.0053 0.0003 0.0001 0.0001
Cell Periphery 0.001 0.0005 0.0001 0.0001 0.0003 0 0.0001 0 0.0002 0.0001 0 0 0.0002 0 0.0004 0.001 0.0001 0
Cytoplasm 0.028 0.982 0.9344 0.9369 0.9787 0.95 0.7956 0.9679 0.8354 0.9181 0.9867 0.9611 0.858 0.9896 0.9016 0.8906 0.9123 0.9766
Cytoplasmic Foci 0.0253 0.0014 0.0085 0.0229 0.0019 0.0022 0.0222 0.0007 0.0249 0.0043 0.0046 0.0069 0.0284 0.0024 0.0185 0.0044 0.0038 0.0068
Eisosomes 0.0015 0 0 0 0 0 0.0001 0 0.0001 0 0 0 0.0002 0 0.0003 0.002 0.0012 0
Endoplasmic Reticulum 0.0508 0.0063 0.0026 0.0032 0.0055 0.0037 0.0035 0.0005 0.0035 0.001 0.002 0.0023 0.0101 0.0012 0.0028 0.0123 0.0012 0.0022
Endosome 0.0743 0.0011 0.0332 0.0156 0.0019 0.0017 0.011 0.0002 0.0244 0.0025 0.0026 0.0097 0.023 0.0008 0.0127 0.0126 0.0014 0.0042
Golgi 0.0305 0.0006 0.002 0.0041 0.0006 0.0001 0.0104 0 0.0159 0.0003 0.0003 0.0121 0.0065 0.0004 0.0064 0.0018 0.002 0.0019
Lipid Particles 0.0195 0.0001 0.0001 0.0002 0 0 0.0034 0 0.0011 0 0 0.0001 0.0038 0 0.0045 0.0015 0.0011 0
Mitochondria 0.01 0.0001 0.0012 0.0031 0.0004 0.0001 0.001 0 0.0097 0.0007 0.0002 0.0011 0.0083 0.0004 0.004 0.001 0.0003 0.0004
None 0.5109 0.0011 0.0014 0.0005 0.0007 0.0339 0.0656 0.0279 0.0049 0.0007 0.0007 0.0011 0.0069 0.003 0.0031 0.0408 0.0322 0.0013
Nuclear Periphery 0.0139 0.0009 0.0015 0.0013 0.0008 0.0013 0.0006 0.0003 0.0006 0.0008 0.0002 0.0004 0.0045 0.0002 0.0014 0.0031 0.0008 0.0006
Nucleolus 0.0003 0 0 0 0 0 0 0 0.0001 0 0 0 0.0044 0 0.0005 0.0059 0.0024 0
Nucleus 0.0018 0.0015 0.003 0.0023 0.002 0.0041 0.0007 0.0013 0.0012 0.0011 0.001 0.0013 0.0043 0.0008 0.0037 0.0083 0.0021 0.0018
Peroxisomes 0.0041 0 0.0003 0.0018 0 0 0.0092 0 0.0039 0.0001 0 0.0002 0.0071 0.0001 0.0054 0.0002 0.0014 0.0002
Punctate Nuclear 0.0031 0.0001 0.0003 0.0005 0.0001 0.0002 0.0005 0.0001 0.0004 0.0001 0.0001 0.0001 0.005 0.0001 0.0025 0.0057 0.0026 0.0002
Vacuole 0.0032 0.0007 0.0066 0.0005 0.003 0.0006 0.0006 0.0001 0.003 0.001 0.0003 0.0003 0.002 0.0001 0.0009 0.0035 0.0002 0.0003
Vacuole Periphery 0.0019 0.0001 0.0018 0.0004 0.0006 0.0002 0.0001 0 0.0007 0.0005 0.0001 0.0002 0.0007 0 0.0004 0.0006 0.0001 0.0001

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 32.9475 25.2455 35.2363 33.8592 31.3845 28.8971 31.6032 27.2778 28.9058 31.923
Translational Efficiency 1.3461 1.5736 1.1338 1.2489 1.0306 1.0769 1.1039 1.0011 1.1066 0.8949

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
630 1390 1473 1264 2170 2223 160 1471 2800 3613 1633 2735

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 915.99 1127.78 1288.80 1463.74 1101.94 1123.75 1476.53 1407.90 1060.10 1125.30 1307.19 1433.71
Standard Deviation 122.15 186.31 210.59 221.84 143.80 178.33 183.88 216.32 159.41 181.45 215.48 220.65
Intensity Change Log 2 — 0.300082 0.492625 0.676256 — 0.028275 0.422165 0.353499 — 0.158030 0.454576 0.508999

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000471 0.000778 0.000309 0.012071 0.000492 0.000642 0.001086 0.000842 0.000487 0.000694 0.000385 0.006031
Bud Neck 0.003137 0.003723 0.001608 0.004844 0.003734 0.004954 0.004183 0.004678 0.003599 0.004480 0.001861 0.004755
Bud Site 0.028891 0.067269 0.004235 0.132071 0.028207 0.043654 0.026980 0.051112 0.028361 0.052739 0.006464 0.088528
Cell Periphery 0.000140 0.000099 0.000098 0.000381 0.000077 0.000056 0.000191 0.000102 0.000091 0.000073 0.000107 0.000231
Cytoplasm 0.685354 0.646275 0.714781 0.640725 0.608545 0.655822 0.656335 0.637103 0.625827 0.652149 0.709055 0.638777
Cytoplasmic Foci 0.187015 0.169870 0.013311 0.089295 0.221098 0.160463 0.049664 0.085976 0.213429 0.164082 0.016873 0.087510
Eisosomes 0.000023 0.000011 0.000013 0.000020 0.000016 0.000012 0.000018 0.000008 0.000017 0.000012 0.000013 0.000013
Endoplasmic Reticulum 0.003969 0.001094 0.002619 0.000406 0.002886 0.000722 0.001151 0.000355 0.003129 0.000865 0.002475 0.000379
Endosome 0.011101 0.018554 0.003714 0.007650 0.019077 0.018605 0.011181 0.022502 0.017282 0.018585 0.004445 0.015638
Golgi 0.005756 0.017940 0.000322 0.016145 0.017128 0.014759 0.002434 0.012621 0.014569 0.015983 0.000529 0.014250
Lipid Particles 0.001543 0.001043 0.001283 0.004861 0.001733 0.000743 0.003063 0.002550 0.001690 0.000858 0.001458 0.003618
Mitochondria 0.001554 0.001341 0.000247 0.000400 0.003325 0.003426 0.000095 0.001226 0.002927 0.002624 0.000232 0.000844
Mitotic Spindle 0.001822 0.005767 0.006863 0.017840 0.004249 0.010961 0.014057 0.034913 0.003703 0.008963 0.007568 0.027023
None 0.001791 0.000677 0.004874 0.000360 0.000703 0.000816 0.001444 0.000873 0.000948 0.000763 0.004538 0.000636
Nuclear Periphery 0.000064 0.000057 0.000794 0.000079 0.000094 0.000134 0.000491 0.000222 0.000087 0.000104 0.000765 0.000156
Nuclear Periphery Foci 0.002122 0.001529 0.003707 0.001862 0.000857 0.000529 0.010554 0.001970 0.001141 0.000913 0.004378 0.001920
Nucleolus 0.000483 0.000267 0.000339 0.000122 0.000333 0.000597 0.000160 0.000354 0.000367 0.000470 0.000322 0.000247
Nucleus 0.015037 0.007831 0.135692 0.011148 0.013182 0.010115 0.082988 0.011688 0.013599 0.009236 0.130528 0.011438
Peroxisomes 0.001986 0.003761 0.000412 0.012741 0.001931 0.004382 0.001225 0.005107 0.001944 0.004143 0.000492 0.008635
Vacuole 0.042830 0.045184 0.104138 0.045020 0.063560 0.060780 0.132145 0.117140 0.058896 0.054780 0.106882 0.083809
Vacuole Periphery 0.004913 0.006928 0.000641 0.001960 0.008774 0.007829 0.000556 0.008659 0.007906 0.007482 0.000633 0.005563

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -3.26 1.60 -8.12 -7.85 -8.22 -1.00 -3.33 -2.47 -0.78 1.70 -1.99 0.80 -8.20 -7.79 -8.33
Bud Neck -1.14 1.95 -4.58 -4.14 -10.74 -3.09 -0.91 -2.79 0.58 -0.65 -2.87 4.66 -5.20 -1.81 -10.98
Bud Site -9.59 10.58 -16.57 -8.16 -23.93 -6.51 1.85 -5.01 0.88 -4.84 -11.67 17.95 -16.79 -7.11 -26.82
Cell Periphery 2.78 3.04 -7.29 -9.21 -9.45 5.50 -7.15 -1.99 -4.62 5.73 3.78 -2.85 -8.99 -10.40 -7.39
Cytoplasm 2.86 2.94 3.33 0.50 0.68 -5.26 2.77 -2.97 1.90 -4.02 -3.57 -1.48 -1.73 1.80 -0.09
Cytoplasmic Foci 2.03 23.09 13.13 14.78 -21.31 10.19 28.15 28.03 18.16 -6.40 10.03 49.24 31.02 23.24 -26.73
Eisosomes 5.89 4.00 1.33 -6.67 -3.71 2.48 -3.62 9.09 3.17 7.83 5.05 1.57 4.08 -1.76 2.05
Endoplasmic Reticulum 2.15 1.34 2.71 3.07 7.81 5.12 4.11 6.48 2.73 5.04 5.09 2.23 6.49 4.04 8.39
Endosome -4.56 7.21 4.15 9.21 -5.79 0.56 6.98 2.75 2.15 -4.42 -1.03 16.97 6.33 7.27 -10.34
Golgi -8.82 10.88 -3.44 3.71 -7.71 2.29 16.92 7.26 5.42 -5.26 -1.09 20.74 5.28 6.22 -9.84
Lipid Particles 1.86 0.91 -7.51 -8.96 -8.37 7.63 -3.53 -4.95 -9.40 0.07 7.12 1.33 -9.00 -12.32 -9.35
Mitochondria 0.29 1.77 1.68 3.26 -1.21 -0.04 5.88 4.58 5.40 -4.42 0.64 5.91 5.17 6.37 -3.67
Mitotic Spindle -3.68 -3.48 -7.49 -5.26 -4.51 -4.44 -1.84 -8.82 -6.09 -2.00 -4.97 -2.73 -10.87 -7.57 -7.55
None 1.70 -3.22 2.15 1.18 11.70 -0.78 -3.27 -0.04 0.56 2.68 1.05 -8.91 2.11 1.37 11.11
Nuclear Periphery 0.22 -11.14 -3.56 -4.01 10.38 -0.78 -8.59 -6.88 -2.33 5.79 -0.59 -11.71 -7.26 -2.63 9.87
Nuclear Periphery Foci 1.32 -4.88 -1.33 -2.72 3.99 3.40 -6.49 -7.17 -9.38 5.53 1.40 -11.44 -7.53 -7.93 7.00
Nucleolus 0.85 0.56 1.36 3.70 8.45 -1.36 4.76 -1.22 1.12 -7.46 -0.80 0.72 1.51 1.66 2.00
Nucleus 5.37 -35.99 -1.72 -7.58 35.50 3.60 -9.25 -4.19 -6.89 8.56 6.16 -38.15 -4.77 -10.09 36.59
Peroxisomes -4.76 6.39 -8.45 -6.47 -10.38 -6.69 5.28 -5.35 1.16 -7.77 -8.40 10.60 -9.95 -4.81 -13.07
Vacuole -0.96 -16.64 -7.27 -7.65 11.47 0.05 -10.22 -18.71 -18.68 5.29 0.79 -17.94 -17.57 -18.74 7.03
Vacuole Periphery -1.35 3.71 2.85 6.83 -2.83 1.27 13.79 3.78 2.63 -5.70 0.80 13.61 6.46 6.05 -6.14
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant
Localization
Cell Percentages cytoplasm (99%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-5

Cca1

Cca1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Cca1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available