Standard name
Human Ortholog
Description Mitochondrial adenylate kinase; catalyzes the reversible synthesis of GTP and AMP from GDP and ADP; may serve as a back-up for synthesizing GTP or ADP depending on metabolic conditions; 3' sequence of ADK2 varies with strain background

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0
Bud 0 0 0.07 0 0 0 0.05 0.05 0.06 0.05 0 0.05 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.5 0.75 0.57 0.65 0.41 0.23 0.25 0.18 0.12 0.18 0.11 0.1 0.9 0.87 0.92 0.52 0.13 0.26 0.15 0.16 0.16 0.28
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0.05 0 0 0.06 0.06 0 0 0 0 0 0 0 0 0.05 0 0.07 0.11 0.07 0.07 0.07 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.39 0.2 0.32 0.28 0.55 0.83 0.82 0.83 0.88 0.82 0.92 0.92 0 0 0 0.19 0.59 0.49 0.57 0.54 0.54 0.43
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0.05 0 0.05 0.08 0.05 0.06 0.05 0.09 0.07 0.09 0.06 0 0 0 0 0.18 0 0 0.05 0 0 0
Vac/Vac Membrane 0.09 0 0 0 0.06 0 0 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0.09 0.1
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 1 2 0 0 0 0 0 0 0 0 1 0 1 0 3 9 5 7 7 4 7
Bud 1 2 15 6 9 13 24 22 28 20 17 22 1 2 0 8 2 1 2 2 3 1
Bud Neck 0 1 3 0 0 3 0 1 0 1 0 1 1 2 0 6 3 4 2 3 4 6
Bud Site 2 0 0 0 1 5 11 8 13 3 8 5 0 0 0 2
Cell Periphery 3 3 4 2 2 1 2 0 3 0 3 2 2 2 1 8 0 0 0 1 0 2
Cytoplasm 145 138 129 129 116 94 113 81 58 81 48 43 179 192 243 116 53 63 42 26 30 56
Endoplasmic Reticulum 3 1 2 0 5 2 0 3 4 1 3 2 3 1 0 4 2 3 5 1 1 1
Endosome 15 5 5 11 17 0 0 2 5 2 0 1 4 11 8 15 43 17 20 10 8 3
Golgi 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 2 0 0 3 1 1
Mitochondria 113 36 72 56 156 341 372 381 429 364 410 388 2 3 2 43 237 122 164 86 99 87
Nucleus 0 0 0 1 2 10 12 6 6 8 4 3 0 1 1 4 0 1 0 0 0 0
Nuclear Periphery 2 0 0 0 1 0 2 0 3 2 3 2 0 0 0 0 0 0 2 0 0 0
Nucleolus 0 0 0 0 1 2 1 6 0 2 5 2 0 0 1 0 0 0 0 0 0 1
Peroxisomes 5 2 1 10 5 0 5 7 4 2 3 6 4 3 3 2 7 2 4 1 3 1
SpindlePole 14 2 11 16 15 25 22 41 35 41 26 15 3 6 1 40 14 7 13 3 5 6
Vac/Vac Membrane 25 7 5 0 16 13 6 7 29 8 14 6 6 9 9 9 12 10 8 4 17 19
Unique Cell Count 290 184 228 198 284 412 456 461 490 443 444 420 200 221 264 221 401 249 287 160 184 202
Labelled Cell Count 330 198 249 231 347 509 570 565 617 535 544 499 205 233 269 261 401 249 287 160 184 202


Mitochondria

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.9 4.1 3.5 3.7 3.7 3.5 3.1 3.3 3.2 2.9 3.0 3.0 5.2 4.8 4.7 5.1 4.7 4.6 5.4 5.3 5.2
Std Deviation (1e-4) 0.6 0.7 1.0 1.7 2.0 1.5 1.7 1.3 1.6 1.1 1.3 1.1 0.8 0.9 0.7 1.3 0.9 1.1 1.4 1.2 1.0
Intensity Change (Log2) 0.09 0.11 0.0 -0.14 -0.07 -0.12 -0.26 -0.2 -0.19 0.58 0.48 0.45 0.55 0.44 0.43 0.65 0.61 0.6


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud 0
Bud Neck 0
Bud Site 0
Cell Periphery 0
Cyto
Endoplasmic Reticulum 0
Endosome 0
Golgi 0
Mitochondria 0
Nuclear Periphery 0
Nuc
Nucleolus 0
Peroxisomes 0
SpindlePole 0
Vac
Cortical Patches 0
Cytoplasm 0
Nucleus 0
Vacuole 1.1

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration
Actin 0.0056 0.0076 0.003 0.0053 0.0023 0.0041 0.045 0.0127 0.0167 0.0205 0.0075 0.0195
Bud 0.0008 0.0025 0.0012 0.0013 0.0007 0.0007 0.0022 0.0064 0.0052 0.002 0.0011 0.0013
Bud Neck 0.0017 0.0013 0.002 0.0012 0.0006 0.001 0.011 0.002 0.0017 0.0522 0.0016 0.0033
Bud Periphery 0.0028 0.0061 0.0065 0.0068 0.0034 0.0018 0.005 0.0102 0.0151 0.0093 0.0051 0.0043
Bud Site 0.0066 0.0179 0.0046 0.0009 0.0021 0.0016 0.0116 0.0724 0.0178 0.0076 0.0022 0.0011
Cell Periphery 0.0015 0.0013 0.001 0.0012 0.0013 0.0006 0.0019 0.004 0.0052 0.0063 0.0079 0.0016
Cytoplasm 0.0367 0.0469 0.0266 0.0565 0.0285 0.0244 0.0372 0.0636 0.0665 0.0996 0.1245 0.0662
Cytoplasmic Foci 0.0882 0.0902 0.0649 0.0513 0.0614 0.0799 0.1366 0.139 0.1076 0.1643 0.0868 0.1132
Eisosomes 0.0009 0.0007 0.0006 0.0007 0.0009 0.0007 0.0018 0.0011 0.0021 0.0003 0.0016 0.0011
Endoplasmic Reticulum 0.0053 0.004 0.0053 0.0023 0.0032 0.0014 0.0025 0.0016 0.0026 0.0009 0.002 0.0015
Endosome 0.1204 0.1404 0.064 0.0731 0.079 0.0789 0.1288 0.1315 0.0963 0.0918 0.0677 0.0864
Golgi 0.0358 0.0453 0.0248 0.018 0.0498 0.0278 0.0754 0.0645 0.0524 0.0524 0.0426 0.0697
Lipid Particles 0.0436 0.0323 0.0242 0.019 0.0195 0.0478 0.0331 0.0162 0.0124 0.0096 0.0036 0.0275
Mitochondria 0.3846 0.4244 0.54 0.5113 0.4265 0.5245 0.3047 0.3447 0.3959 0.1999 0.3353 0.3946
None 0.1999 0.1121 0.1545 0.2195 0.2894 0.1389 0.1257 0.0625 0.1117 0.1888 0.2461 0.1321
Nuclear Periphery 0.0024 0.0016 0.0017 0.0006 0.0008 0.0011 0.0007 0.0005 0.0006 0.0006 0.0004 0.0004
Nucleolus 0.0016 0.0048 0.0027 0.001 0.003 0.001 0.0009 0.001 0.0012 0.0006 0.0006 0.0006
Nucleus 0.0031 0.0029 0.002 0.001 0.0025 0.001 0.0008 0.0012 0.0012 0.0009 0.0008 0.0007
Peroxisomes 0.0424 0.0342 0.0541 0.0204 0.0182 0.0527 0.067 0.0492 0.0751 0.08 0.0565 0.0687
Punctate Nuclear 0.0017 0.002 0.0045 0.0006 0.0014 0.001 0.0012 0.0005 0.0015 0.0039 0.0004 0.0008
Vacuole 0.0104 0.0159 0.008 0.006 0.0033 0.0058 0.0049 0.0119 0.0079 0.0069 0.0038 0.0035
Vacuole Periphery 0.0042 0.0054 0.0039 0.0022 0.0022 0.0034 0.0021 0.0032 0.0033 0.0015 0.0019 0.0019

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 12.2058 13.0935 7.5568 9.2113 9.4952 11.3858 10.2969 7.9425 13.2151 14.8819
Translational Efficiency 1.7612 0.9239 1.1506 1.7301 1.9307 2.7408 1.7117 2.5825 1.4866 1.9567

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
131 1441 2275 703 2067 2248 1861 1423 2198 3689 4136 2126

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 561.12 682.50 755.26 829.00 668.18 684.94 756.92 797.77 661.80 683.99 756.01 808.10
Standard Deviation 54.18 90.86 88.84 104.00 122.46 87.44 88.04 99.89 122.15 88.80 88.48 102.33
Intensity Change Log 2 0.282520 0.428664 0.563063 0.035741 0.179904 0.255736 0.153640 0.298793 0.404173

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000227 0.001386 0.003078 0.002379 0.000937 0.000874 0.001554 0.003990 0.000895 0.001074 0.002392 0.003457
Bud Neck 0.036091 0.047088 0.042759 0.027322 0.039989 0.037739 0.074591 0.036358 0.039756 0.041391 0.057082 0.033370
Bud Site 0.005926 0.029659 0.062688 0.051111 0.026779 0.023085 0.055432 0.051508 0.025536 0.025653 0.059423 0.051376
Cell Periphery 0.001196 0.000195 0.000151 0.000186 0.000356 0.000182 0.000166 0.000269 0.000406 0.000187 0.000158 0.000242
Cytoplasm 0.179609* 0.091331 0.085796 0.345051* 0.122062* 0.064431 0.159013* 0.327869* 0.125492* 0.074939 0.118740* 0.333551*
Cytoplasmic Foci 0.340082* 0.277037* 0.108820 0.079898 0.280920* 0.216942* 0.105967 0.136042 0.284446* 0.240416* 0.107536 0.117477
Eisosomes 0.000802 0.000220 0.000103 0.000110 0.000258 0.000212 0.000110 0.000194 0.000290 0.000215 0.000106 0.000166
Endoplasmic Reticulum 0.001081 0.000914 0.006488 0.003182 0.001542 0.000670 0.002661 0.001873 0.001515 0.000765 0.004766 0.002306
Endosome 0.019097 0.072563 0.047364 0.014498 0.072662 0.087109 0.052704 0.017137 0.069470 0.081427 0.049767 0.016264
Golgi 0.020628 0.057525 0.031545 0.011633 0.052203 0.074674 0.011775 0.006860 0.050321 0.067975 0.022649 0.008438
Lipid Particles 0.056534 0.013487 0.005893 0.003789 0.027612 0.010549 0.008572 0.004144 0.029336 0.011697 0.007099 0.004027
Mitochondria 0.152532* 0.219286* 0.187644* 0.004197 0.215903* 0.319396* 0.099189 0.014487 0.212126* 0.280291* 0.147843* 0.011084
Mitotic Spindle 0.000238 0.020829 0.141395* 0.052893 0.009320 0.025304 0.087898 0.022335 0.008779 0.023556 0.117324* 0.032440
None 0.001613 0.002686 0.002004 0.004165 0.004676 0.001503 0.002562 0.002291 0.004493 0.001965 0.002255 0.002910
Nuclear Periphery 0.000459 0.000413 0.004287 0.001488 0.000613 0.000269 0.003172 0.000685 0.000604 0.000325 0.003785 0.000951
Nuclear Periphery Foci 0.000116 0.000384 0.001972 0.001486 0.000901 0.000297 0.000792 0.000602 0.000855 0.000331 0.001441 0.000895
Nucleolus 0.000937 0.004015 0.006178 0.001478 0.003188 0.001862 0.007363 0.001364 0.003054 0.002703 0.006711 0.001402
Nucleus 0.068028 0.029917 0.082556 0.189071* 0.035346 0.014555 0.126028 0.167733* 0.037294 0.020556 0.102117 0.174789*
Peroxisomes 0.092616 0.080510 0.048070 0.031859 0.041453 0.069735 0.047266 0.071829 0.044502 0.073943 0.047708 0.058612
Vacuole 0.016592 0.041813 0.116971 0.172483 0.052104 0.040589 0.144767 0.130282 0.049987 0.041067 0.129478 0.144236
Vacuole Periphery 0.005597 0.008743 0.014238 0.001721 0.011177 0.010023 0.008417 0.002148 0.010845 0.009523 0.011619 0.002007

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -4.74 -13.16 -6.60 -1.23 4.37 0.40 -3.31 -5.96 -6.14 -4.24 -1.10 -8.85 -6.64 -5.96 -1.06
Bud Neck -1.48 -1.26 2.15 7.13 7.98 0.77 -10.09 3.13 2.35 12.43 -0.66 -7.45 4.89 5.99 13.41
Bud Site -9.19 -18.08 -6.30 -0.60 6.68 1.62 -7.47 -4.38 -5.85 2.59 -0.01 -12.55 -4.51 -5.06 6.55
Cell Periphery 2.85 2.97 2.98 2.75 0.36 5.15 6.10 3.35 -1.84 -3.10 5.81 6.85 5.20 -0.78 -3.08
Cytoplasm 4.84 5.03 -6.03 -19.87 -20.73 11.84 -6.51 -23.06 -32.28 -16.90 11.00 0.56 -26.13 -37.50 -28.64
Cytoplasmic Foci 3.17 12.49 14.86 31.96 10.15 9.81 30.46 24.71 16.34 -3.69 7.33 34.36 32.13 30.36 0.94
Eisosomes 3.29 3.96 3.96 5.96 0.21 1.51 7.82 3.51 1.20 -4.92 2.86 8.81 6.08 3.22 -4.87
Endoplasmic Reticulum 0.63 -11.84 -7.84 -10.02 6.29 4.73 -7.10 -3.96 -8.73 3.37 4.77 -12.92 -7.12 -12.98 8.45
Endosome -11.11 -6.76 2.64 18.75 18.63 -3.80 7.14 20.79 24.20 13.51 -3.66 8.09 22.09 30.23 21.28
Golgi -7.24 -1.92 3.48 16.19 10.40 -6.20 15.45 17.54 26.59 5.00 -5.64 11.24 17.66 31.20 13.15
Lipid Particles 5.37 6.35 6.70 8.82 5.26 9.58 11.11 14.60 8.02 6.18 10.29 13.65 16.02 11.80 7.93
Mitochondria -3.00 -1.14 7.53 30.13* 33.95* -11.42 17.48 32.51* 45.55* 18.79* -8.68 11.02 34.05 53.65* 36.81*
Mitotic Spindle -9.57 -28.69* -7.29 -3.20 13.89 -7.67 -16.87 -4.67 1.62 13.04 -8.80 -30.60 -7.22 -1.18 21.62*
None -1.84 -0.80 -2.30 -0.71 -1.62 3.54 2.26 2.88 -1.44 0.90 2.96 2.61 2.35 -1.25 -0.54
Nuclear Periphery 0.34 -7.72 -11.96 -13.64 3.83 3.00 -6.47 -3.99 -10.64 5.56 2.70 -9.63 -8.20 -16.86 7.21
Nuclear Periphery Foci -5.47 -7.45 -10.96 -8.63 1.51 1.76 0.03 0.38 -3.66 0.89 1.64 -2.34 -0.85 -7.87 3.05
Nucleolus -4.54 -11.46 -2.35 3.82 10.25 3.03 -5.40 3.39 0.49 7.74 0.38 -7.33 3.75 3.27 11.98
Nucleus 2.97 -1.80 -9.70 -20.58 -13.07 8.53 -19.88 -24.27 -28.48 -6.34 6.90 -20.61 -29.95 -34.83 -14.54
Peroxisomes 0.76 2.92 4.79 13.45 8.05 -8.35 -1.02 -3.15 3.18 -2.27 -9.78 -0.64 0.55 8.92 1.11
Vacuole -6.01 -21.28 -24.62 -23.15 -14.94 3.75 -22.02 -21.56 -23.73 -3.98 3.22 -26.26 -29.85 -32.54 -13.53
Vacuole Periphery -1.94 -4.82 3.26 12.41 16.72 1.40 4.32 14.08 13.19 8.34 1.91 0.19 15.37 17.46 17.53
Standard name
Human Ortholog
Description Mitochondrial adenylate kinase; catalyzes the reversible synthesis of GTP and AMP from GDP and ADP; may serve as a back-up for synthesizing GTP or ADP depending on metabolic conditions; 3' sequence of ADK2 varies with strain background
Localization
Cell Percentages mitochondrion (67%)
Cell Cycle Regulation No
Subcompartmental Group mito-1

Adk2

Adk2


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Adk2-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available