Standard name | |
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Human Ortholog | |
Description | Gamma-aminobutyrate (GABA) transaminase; also known as 4-aminobutyrate aminotransferase; involved in the 4-aminobutyrate and glutamate degradation pathways; required for normal oxidative stress tolerance and nitrogen utilization; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
Bud | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 2 | 5 | 8 | 7 | 1 | 8 | 11 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 4 | 2 | 1 | 0 | 5 | 4 | 11 | 6 | 8 | 13 | 15 | 7 | 5 | 5 | 3 | 14 | 23 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 173 | 134 | 140 | 92 | 162 | 193 | 223 | 222 | 168 | 140 | 138 | 125 | 203 | 263 | 269 | 503 | 460 | 364 | 166 | 117 | 118 | 136 | 241 | 187 |
Endoplasmic Reticulum | 0 | 1 | 0 | 3 | 6 | 2 | 21 | 25 | 17 | 10 | 9 | 9 | 0 | 2 | 0 | 21 | 23 | 16 | 0 | 0 | 2 | 1 | 0 | 4 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 5 | 1 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Vac/Vac Membrane | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 3 | 5 | 5 | 0 | 1 | 1 | 2 | 0 | 3 |
Unique Cell Count | 175 | 137 | 141 | 96 | 170 | 196 | 251 | 249 | 192 | 156 | 161 | 140 | 203 | 267 | 269 | 512 | 472 | 370 | 183 | 133 | 137 | 143 | 256 | 212 |
Labelled Cell Count | 179 | 139 | 143 | 96 | 173 | 199 | 255 | 254 | 198 | 171 | 173 | 145 | 210 | 271 | 272 | 547 | 514 | 395 | 183 | 133 | 137 | 143 | 256 | 212 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 20.7 | 22.0 | 28.1 | 62.9 | 70.6 | 85.5 | 84.4 | 80.6 | 75.8 | 61.8 | 69.9 | 71.2 | 25.5 | 28.4 | 28.7 | 56.5 | 66.9 | 66.9 | 19.8 | 21.1 | 20.4 |
Std Deviation (1e-4) | 9.9 | 14.0 | 14.6 | 24.6 | 24.8 | 29.2 | 25.0 | 28.2 | 30.0 | 23.0 | 26.8 | 26.6 | 10.7 | 11.4 | 10.9 | 21.5 | 25.5 | 30.6 | 9.7 | 9.4 | 8.5 |
Intensity Change (Log2) | – | – | – | 1.16 | 1.33 | 1.6 | 1.58 | 1.52 | 1.43 | 1.13 | 1.31 | 1.34 | -0.14 | 0.01 | 0.03 | 1.01 | 1.25 | 1.25 | -0.51 | -0.42 | -0.47 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 3.1 | 3.3 | 0 | 0 | 0 | 0 | 0 | 2.2 | 0 |
Cytoplasm | -1.8 | -2.1 | -0.7 | -3.8 | -3.7 | -4.0 | -3.5 | -4.4 | -3.6 | 1.2 | -0.7 | 1.4 | -0.9 | -1.3 | -0.8 |
Endoplasmic Reticulum | 0 | 0 | 0 | 3.5 | 3.9 | 3.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.7 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 9.0399 | 15.2519 | 11.9146 | 9.4738 | 9.2641 | 11.8763 | 13.482 | 15.6881 | 13.8552 | 14.7089 | 13.4744 | 14.4333 | 12.9828 | 16.2322 | 14.2182 | 14.8856 | 12.8069 | 15.5977 |
Actin | 0.0142 | 0.001 | 0.0085 | 0.0002 | 0.0303 | 0.006 | 0.018 | 0.0013 | 0.0087 | 0.0249 | 0.0066 | 0.0159 | 0.049 | 0.0007 | 0.0239 | 0.0184 | 0.0247 | 0.0017 |
Bud | 0.002 | 0.0002 | 0.003 | 0.0002 | 0.0003 | 0.0003 | 0.0009 | 0.0031 | 0.0007 | 0.0007 | 0.0036 | 0.0006 | 0.0006 | 0.0003 | 0.0006 | 0.0004 | 0.0003 | 0.0002 |
Bud Neck | 0.0014 | 0.0002 | 0.0007 | 0.0004 | 0.0006 | 0.001 | 0.0032 | 0.0002 | 0.0009 | 0.0005 | 0.0005 | 0.001 | 0.0019 | 0.0001 | 0.0008 | 0.0008 | 0.0009 | 0.0011 |
Bud Periphery | 0.0014 | 0.0001 | 0.0016 | 0 | 0.0001 | 0.0003 | 0.0007 | 0.0018 | 0.0003 | 0.0004 | 0.0014 | 0.0003 | 0.0007 | 0.0001 | 0.0004 | 0.0007 | 0.0004 | 0.0001 |
Bud Site | 0.0031 | 0.0011 | 0.0039 | 0.0001 | 0.0003 | 0.0004 | 0.0068 | 0.0031 | 0.0011 | 0.0013 | 0.0015 | 0.0007 | 0.0018 | 0.0004 | 0.0033 | 0.0053 | 0.0019 | 0.0001 |
Cell Periphery | 0.0005 | 0.0001 | 0.0002 | 0 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0008 | 0.0001 | 0 |
Cytoplasm | 0.8484 | 0.9828 | 0.9376 | 0.9838 | 0.8965 | 0.9482 | 0.8616 | 0.9688 | 0.9331 | 0.8599 | 0.8773 | 0.9377 | 0.8328 | 0.9892 | 0.9188 | 0.9376 | 0.8441 | 0.9658 |
Cytoplasmic Foci | 0.0207 | 0.0014 | 0.012 | 0.0026 | 0.008 | 0.0045 | 0.027 | 0.0105 | 0.0153 | 0.0303 | 0.0233 | 0.0097 | 0.0315 | 0.0021 | 0.0094 | 0.0031 | 0.0154 | 0.0061 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0003 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0.0003 | 0 | 0.0003 | 0.001 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0073 | 0.001 | 0.0013 | 0.0015 | 0.0019 | 0.0042 | 0.0069 | 0.0006 | 0.0021 | 0.0014 | 0.0035 | 0.0046 | 0.0102 | 0.0006 | 0.0043 | 0.0031 | 0.0032 | 0.0021 |
Endosome | 0.0223 | 0.0007 | 0.0032 | 0.0018 | 0.0078 | 0.0074 | 0.0199 | 0.0022 | 0.0098 | 0.0092 | 0.0169 | 0.007 | 0.0201 | 0.0004 | 0.0056 | 0.0045 | 0.0145 | 0.0035 |
Golgi | 0.0074 | 0.0001 | 0.0014 | 0.0001 | 0.0052 | 0.0013 | 0.0078 | 0.0004 | 0.0059 | 0.0039 | 0.0049 | 0.003 | 0.0044 | 0.0001 | 0.0025 | 0.0028 | 0.0109 | 0.0006 |
Lipid Particles | 0.0118 | 0 | 0.0027 | 0 | 0.0088 | 0.0008 | 0.0056 | 0.0002 | 0.0019 | 0.0099 | 0.0014 | 0.0018 | 0.0033 | 0 | 0.0035 | 0.0034 | 0.0244 | 0.0001 |
Mitochondria | 0.0088 | 0.0001 | 0.0009 | 0.0001 | 0.0019 | 0.0068 | 0.0071 | 0.0002 | 0.0062 | 0.0043 | 0.0025 | 0.001 | 0.0022 | 0.0001 | 0.0018 | 0.0088 | 0.0296 | 0.001 |
None | 0.0086 | 0.0067 | 0.0071 | 0.0012 | 0.0038 | 0.0014 | 0.0142 | 0.0023 | 0.0028 | 0.0028 | 0.0031 | 0.0054 | 0.0076 | 0.0023 | 0.0082 | 0.0026 | 0.0025 | 0.0092 |
Nuclear Periphery | 0.0065 | 0.0008 | 0.0016 | 0.0013 | 0.0081 | 0.0025 | 0.0026 | 0.0006 | 0.0014 | 0.0019 | 0.0052 | 0.002 | 0.0107 | 0.0005 | 0.0025 | 0.001 | 0.0017 | 0.0013 |
Nucleolus | 0.0004 | 0 | 0.0005 | 0 | 0.0004 | 0 | 0.0004 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0004 | 0 | 0.0003 | 0.0001 | 0.0015 | 0 |
Nucleus | 0.0121 | 0.0027 | 0.0077 | 0.0051 | 0.0061 | 0.0098 | 0.0066 | 0.0035 | 0.0036 | 0.0056 | 0.0062 | 0.0047 | 0.011 | 0.0025 | 0.005 | 0.0023 | 0.0036 | 0.0056 |
Peroxisomes | 0.0093 | 0.0001 | 0.0027 | 0 | 0.0093 | 0.0016 | 0.0023 | 0.0002 | 0.0031 | 0.0381 | 0.0382 | 0.0016 | 0.0027 | 0 | 0.0041 | 0.0009 | 0.0161 | 0.0002 |
Punctate Nuclear | 0.0057 | 0.0002 | 0.0023 | 0.0004 | 0.0065 | 0.0007 | 0.0041 | 0.0004 | 0.001 | 0.0029 | 0.0023 | 0.0016 | 0.006 | 0.0002 | 0.0034 | 0.0003 | 0.0016 | 0.0008 |
Vacuole | 0.0064 | 0.0007 | 0.0008 | 0.001 | 0.0029 | 0.002 | 0.003 | 0.0004 | 0.0016 | 0.0013 | 0.0012 | 0.001 | 0.0018 | 0.0002 | 0.0007 | 0.0016 | 0.0015 | 0.0005 |
Vacuole Periphery | 0.0014 | 0.0001 | 0.0002 | 0.0002 | 0.0008 | 0.0007 | 0.0006 | 0.0001 | 0.0003 | 0.0004 | 0.0004 | 0.0003 | 0.0007 | 0 | 0.0003 | 0.0006 | 0.0006 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 53.378 | 39.0092 | 37.217 | 49.1805 | 36.3715 | 54.5166 | 71.8411 | 72.0188 | 89.9508 | 69.9724 |
Translational Efficiency | 1.233 | 1.6218 | 1.5474 | 1.4826 | 1.7722 | 1.6132 | 1.5938 | 1.6099 | 1.5042 | 1.5577 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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