Standard name | |
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Human Ortholog | |
Description | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bateria |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 5 | 1 | 2 | 2 | 3 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | 0 | 1 | 1 | 0 | 0 | 1 | 5 | 10 | 4 | 11 | 3 | 16 | 0 | 1 | 1 | 0 | 1 | 0 | 5 | 6 | 4 | 0 | 5 | 14 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 1 | 1 | 4 | 2 | 12 | 5 | 9 | 6 | 12 | 0 | 6 | 6 | 3 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 86 | 26 | 27 | 69 | 145 | 163 | 170 | 172 | 127 | 163 | 87 | 135 | 17 | 160 | 159 | 87 | 120 | 100 | 64 | 8 | 29 | 57 | 89 | 118 |
Endoplasmic Reticulum | 1 | 0 | 0 | 0 | 0 | 1 | 4 | 5 | 6 | 4 | 6 | 9 | 0 | 0 | 1 | 9 | 5 | 4 | 0 | 1 | 0 | 0 | 0 | 1 |
Endosome | 1 | 2 | 1 | 9 | 5 | 7 | 0 | 1 | 6 | 1 | 0 | 2 | 0 | 2 | 0 | 1 | 3 | 8 | 6 | 1 | 0 | 0 | 2 | 2 |
Golgi | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Mitochondria | 23 | 0 | 4 | 9 | 8 | 31 | 39 | 58 | 42 | 17 | 20 | 12 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 4 | 0 | 1 | 0 | 1 |
Nucleus | 51 | 13 | 6 | 29 | 15 | 22 | 11 | 13 | 8 | 7 | 2 | 4 | 2 | 4 | 3 | 14 | 23 | 8 | 126 | 100 | 41 | 14 | 23 | 26 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 5 | 6 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 4 | 4 |
Vac/Vac Membrane | 83 | 98 | 30 | 78 | 72 | 62 | 67 | 70 | 54 | 73 | 31 | 62 | 5 | 33 | 20 | 82 | 124 | 97 | 23 | 16 | 7 | 7 | 17 | 14 |
Unique Cell Count | 200 | 125 | 56 | 170 | 220 | 253 | 272 | 304 | 235 | 269 | 147 | 229 | 22 | 195 | 181 | 163 | 244 | 186 | 239 | 146 | 87 | 89 | 150 | 197 |
Labelled Cell Count | 245 | 142 | 69 | 198 | 247 | 291 | 305 | 354 | 263 | 290 | 158 | 257 | 24 | 211 | 194 | 199 | 284 | 220 | 239 | 146 | 87 | 89 | 150 | 197 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.1 | 21.7 | 9.4 | 8.3 | 8.5 | 9.2 | 14.3 | 16.7 | 18.8 | 26.3 | 26.4 | 35.3 | 6.0 | 14.2 | 23.8 | 12.5 | 11.9 | 11.0 | 7.1 | 7.6 | 8.2 |
Std Deviation (1e-4) | 1.3 | 17.1 | 4.3 | 3.2 | 4.2 | 5.6 | 14.3 | 15.0 | 17.7 | 22.4 | 24.0 | 29.9 | 1.8 | 12.5 | 21.2 | 5.0 | 4.4 | 4.1 | 3.1 | 2.9 | 4.0 |
Intensity Change (Log2) | – | – | – | -0.19 | -0.15 | -0.03 | 0.61 | 0.83 | 0.99 | 1.48 | 1.49 | 1.91 | -0.65 | 0.6 | 1.34 | 0.41 | 0.34 | 0.23 | -0.42 | -0.31 | -0.2 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.0 | 2.4 | 2.3 | 2.0 | 1.2 | 0.8 | 1.7 | 1.4 | 1.5 | 2.3 | 5.1 | 6.3 | 0.7 | 0.1 | 0.7 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 1.1 | 1.5 | 2.2 | 2.0 | 0 | 1.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 1.1 | 0 | -0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.5 | -0.3 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -1.0 | -2.9 | -4.3 | -4.3 | -4.7 | -4.5 | -3.9 | -4.5 | -3.8 | -2.5 | -5.6 | -6.8 | -0.4 | -0.4 | -0.2 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 13.2613 | 18.1068 | 12.7958 | 11.1762 | 13.2493 | 15.0169 | 8.5657 | 10.8283 | 8.9649 | 9.1566 | 8.3797 | 10.5249 | 8.62 | 9.2072 | 8.9662 | 9.4515 | 8.625 | 8.7087 |
Actin | 0.0159 | 0.0007 | 0.0069 | 0.0384 | 0.0036 | 0.0006 | 0.0316 | 0.0011 | 0.0093 | 0.0028 | 0.009 | 0.0013 | 0.0144 | 0.0003 | 0.0025 | 0.0024 | 0.0399 | 0.0021 |
Bud | 0.001 | 0.0008 | 0.0006 | 0.0004 | 0.0006 | 0.0002 | 0.0016 | 0.0008 | 0.001 | 0.0003 | 0.0013 | 0.0002 | 0.0008 | 0.0007 | 0.0011 | 0.0003 | 0.0006 | 0.0004 |
Bud Neck | 0.0007 | 0.0003 | 0.0006 | 0.002 | 0.001 | 0.0009 | 0.003 | 0.0008 | 0.0009 | 0.0015 | 0.0018 | 0.0015 | 0.0011 | 0.0004 | 0.0004 | 0.0005 | 0.0011 | 0.0017 |
Bud Periphery | 0.001 | 0.0004 | 0.0002 | 0.0004 | 0.0005 | 0.0001 | 0.0019 | 0.0005 | 0.0005 | 0.0004 | 0.0018 | 0.0002 | 0.0012 | 0.0002 | 0.0004 | 0.0004 | 0.0014 | 0.0021 |
Bud Site | 0.0045 | 0.0046 | 0.0006 | 0.0007 | 0.0006 | 0.0001 | 0.0055 | 0.0027 | 0.0011 | 0.0009 | 0.0037 | 0.0004 | 0.0026 | 0.0017 | 0.0014 | 0.0007 | 0.0007 | 0.0003 |
Cell Periphery | 0.0006 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0006 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0002 |
Cytoplasm | 0.1038 | 0.2149 | 0.125 | 0.0099 | 0.1427 | 0.1248 | 0.091 | 0.214 | 0.0807 | 0.1029 | 0.1314 | 0.0942 | 0.1371 | 0.2819 | 0.0935 | 0.1039 | 0.1135 | 0.1052 |
Cytoplasmic Foci | 0.0184 | 0.0014 | 0.0125 | 0.0065 | 0.0389 | 0.0019 | 0.0225 | 0.0029 | 0.0047 | 0.004 | 0.0194 | 0.004 | 0.0194 | 0.0018 | 0.0167 | 0.0068 | 0.0014 | 0.0035 |
Eisosomes | 0.0003 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0.0004 | 0 |
Endoplasmic Reticulum | 0.0046 | 0.0005 | 0.0044 | 0.0005 | 0.0037 | 0.0006 | 0.0104 | 0.001 | 0.0012 | 0.004 | 0.0042 | 0.0016 | 0.0033 | 0.0015 | 0.0017 | 0.0021 | 0.0019 | 0.0036 |
Endosome | 0.0204 | 0.0008 | 0.008 | 0.0129 | 0.0214 | 0.0023 | 0.0313 | 0.0019 | 0.0141 | 0.0242 | 0.0326 | 0.0127 | 0.0216 | 0.0013 | 0.0057 | 0.0213 | 0.0076 | 0.0153 |
Golgi | 0.004 | 0.0003 | 0.0009 | 0.0287 | 0.0057 | 0.0004 | 0.006 | 0.0006 | 0.0065 | 0.0042 | 0.006 | 0.0038 | 0.0063 | 0 | 0.0039 | 0.0027 | 0.0052 | 0.0034 |
Lipid Particles | 0.0103 | 0.0007 | 0.0024 | 0.002 | 0.0254 | 0.0016 | 0.0069 | 0.0001 | 0.0072 | 0.013 | 0.0145 | 0.006 | 0.018 | 0 | 0.0082 | 0.021 | 0.0023 | 0.0027 |
Mitochondria | 0.0107 | 0.0014 | 0.0009 | 0.0065 | 0.0151 | 0.0004 | 0.0118 | 0.0018 | 0.0138 | 0.0343 | 0.0088 | 0.0045 | 0.0101 | 0.0003 | 0.0061 | 0.006 | 0.0059 | 0.0233 |
None | 0.0033 | 0.0004 | 0.003 | 0.0001 | 0.0078 | 0.0005 | 0.0056 | 0.0018 | 0.0032 | 0.0008 | 0.0012 | 0.0005 | 0.0021 | 0.004 | 0.0035 | 0.0013 | 0.0009 | 0.0004 |
Nuclear Periphery | 0.0266 | 0.0199 | 0.0129 | 0.0075 | 0.0484 | 0.0176 | 0.0277 | 0.0136 | 0.0079 | 0.0178 | 0.0201 | 0.0084 | 0.017 | 0.0166 | 0.0103 | 0.0097 | 0.0401 | 0.0167 |
Nucleolus | 0.0048 | 0.0015 | 0.005 | 0.0003 | 0.0024 | 0.0017 | 0.0017 | 0.0008 | 0.0022 | 0.0013 | 0.0016 | 0.0014 | 0.0016 | 0.0009 | 0.0009 | 0.0013 | 0.0034 | 0.0012 |
Nucleus | 0.7355 | 0.7345 | 0.8049 | 0.8762 | 0.64 | 0.8286 | 0.7124 | 0.7444 | 0.818 | 0.7566 | 0.6983 | 0.8462 | 0.7174 | 0.6786 | 0.8295 | 0.8028 | 0.7462 | 0.8039 |
Peroxisomes | 0.0085 | 0.0022 | 0.0008 | 0.0054 | 0.0092 | 0.001 | 0.0058 | 0.0016 | 0.0077 | 0.0035 | 0.0107 | 0.0016 | 0.0031 | 0.0001 | 0.0077 | 0.0029 | 0.0006 | 0.0009 |
Punctate Nuclear | 0.0141 | 0.0127 | 0.0074 | 0.0011 | 0.023 | 0.0156 | 0.0138 | 0.0081 | 0.0174 | 0.0226 | 0.0276 | 0.0095 | 0.0137 | 0.0077 | 0.0051 | 0.0025 | 0.0236 | 0.0065 |
Vacuole | 0.0082 | 0.0014 | 0.0023 | 0.0003 | 0.0062 | 0.0008 | 0.0064 | 0.0013 | 0.0016 | 0.0032 | 0.0043 | 0.0012 | 0.0067 | 0.0015 | 0.0008 | 0.0076 | 0.0016 | 0.0034 |
Vacuole Periphery | 0.0026 | 0.0005 | 0.0006 | 0.0003 | 0.0038 | 0.0003 | 0.0024 | 0.0002 | 0.0007 | 0.0016 | 0.0016 | 0.0006 | 0.0019 | 0.0003 | 0.0004 | 0.0036 | 0.0014 | 0.0032 |
R1 | R2 | |||||||||
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G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3624.9984 | 3827.0211 | 4829.7366 | 2921.0447 | 3694.6739 | 3540.1993 | 3595.208 | 3703.8799 | 4833.8396 | 3218.8028 |
Translational Efficiency | 0.6594 | 0.6419 | 0.4934 | 0.9379 | 0.6408 | 0.6529 | 0.9341 | 0.9062 | 0.6261 | 0.8066 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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