Standard name
Human Ortholog
Description Protein that associates with mitochondrial ribosome; homozygous diploid deletion strain has a sporulation defect characterized by elevated dityrosine in the soluble fraction; expression induced by calcium shortage; YJL147W is a non-essential gene
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0
Bud 0 0 0.05 0 0 0 0.06 0.05 0.06 0.07 0.05 0.05 0 0 0 0 0.05 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.05 0.05 0 0 0 0 0 0
Cytoplasm 0.26 0.43 0.26 0.15 0.41 0.14 0.12 0.09 0.11 0.08 0.05 0.08 0.63 0.75 0.82 0.34 0.28 0.35 0.11 0.24 0.05 0.1 0.11 0.13
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0.06 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0.11 0.08 0.06 0.16 0.12 0.21 0.11 0.06 0.09 0.07 0.08 0.08
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.8 0.47 0.64 0.86 0.61 0.89 0.9 0.86 0.89 0.93 0.95 0.93 0.11 0.05 0 0.16 0.16 0.11 0.63 0.51 0.63 0.66 0.58 0.55
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0 0.11 0.07 0.14 0 0 0.08 0 0 0
SpindlePole 0 0 0 0 0 0 0.05 0.09 0.07 0 0 0.06 0.08 0 0 0.16 0.17 0.17 0 0 0 0 0 0
Vac/Vac Membrane 0.05 0.12 0 0 0 0 0 0 0 0 0 0 0.05 0.09 0 0.1 0.12 0.14 0 0.09 0 0.06 0.07 0.05
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 1 0 0 1 0 0 0 1 0 0 0 0 9 2 4 0 13 2 2 0 7 6 10 18
Bud 5 2 12 6 7 11 40 27 28 32 25 28 3 1 2 7 13 8 0 1 2 2 9 12
Bud Neck 0 0 3 0 2 0 2 3 1 2 0 2 3 3 7 1 7 0 2 1 1 6 8 10
Bud Site 0 0 0 0 1 9 8 9 13 14 15 20 0 0 0 0 2 0 – – – – – –
Cell Periphery 0 3 6 6 1 3 3 3 2 2 4 2 11 15 7 12 13 10 0 0 1 1 2 1
Cytoplasm 62 39 58 34 128 57 83 53 50 40 26 46 317 459 573 76 69 67 28 31 12 46 71 80
Endoplasmic Reticulum 3 2 3 2 2 2 2 2 2 3 1 1 16 4 5 17 15 7 2 0 2 2 3 4
Endosome 0 2 9 0 11 3 3 4 0 0 0 0 53 52 45 36 29 39 30 7 24 29 49 49
Golgi 0 0 1 0 0 0 0 0 0 0 0 0 2 1 0 2 4 1 2 1 2 4 4 12
Mitochondria 193 43 142 197 192 361 598 485 388 445 482 553 53 29 23 36 39 20 165 65 168 298 362 347
Nucleus 2 0 0 0 5 6 16 10 5 6 5 7 2 0 2 7 1 2 0 0 1 1 4 4
Nuclear Periphery 1 0 3 1 0 1 6 5 8 9 6 10 0 0 1 0 1 0 1 0 0 0 3 5
Nucleolus 1 0 0 0 2 6 9 6 5 3 5 7 0 0 1 0 0 0 0 0 0 0 3 2
Peroxisomes 1 0 16 5 12 1 8 10 5 5 1 5 19 11 12 25 16 26 7 1 20 6 9 13
SpindlePole 8 1 9 9 10 14 35 52 29 21 16 36 38 24 24 36 42 33 4 3 6 12 27 21
Vac/Vac Membrane 11 11 3 4 12 17 15 10 18 13 21 21 27 57 31 22 30 27 7 11 4 25 41 29
Unique Cell Count 241 91 221 230 316 407 664 566 438 481 506 595 503 615 699 223 243 190 262 128 266 454 624 627
Labelled Cell Count 288 103 265 265 385 491 828 680 554 595 607 738 553 658 737 277 294 242 262 128 266 454 624 627


Mitochondria

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.3 4.5 3.9 3.5 3.7 3.3 3.2 3.3 3.1 3.1 2.9 3.0 5.3 5.3 5.1 5.7 5.8 5.5 5.6 5.6 6.0
Std Deviation (1e-4) 0.5 1.0 0.9 1.2 1.2 0.8 1.0 1.0 0.9 0.8 0.7 0.7 1.2 1.0 1.0 1.4 1.2 1.2 1.0 1.4 1.5
Intensity Change (Log2) – – – -0.13 -0.05 -0.25 -0.26 -0.23 -0.32 -0.33 -0.42 -0.39 0.45 0.46 0.39 0.56 0.58 0.51 0.53 0.54 0.63


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – 0 0 0
Bud Neck – – – – – – – – – – – – 0 0 0
Bud Site – – – – – – – – – – – – 0 0 0
Cell Periphery – – – – – – – – – – – – 0 0 0
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – 0 0 0
Endosome – – – – – – – – – – – – 0 0 0
Golgi – – – – – – – – – – – – 0 0 0
Mitochondria – – – – – – – – – – – – 0 0 0
Nuclear Periphery – – – – – – – – – – – – 0 0 0
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – 0 0 0
Peroxisomes – – – – – – – – – – – – 0 0 0
SpindlePole – – – – – – – – – – – – 0 0 0
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – 0 0 0
Cytoplasm – – – – – – – – – – – – 0 0 0
Nucleus – – – – – – – – – – – – 0 0 0
Vacuole – – – – – – – – – – – – 3.9 4.6 5.0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 2.7725 2.2785 2.3869 2.0521 2.8297 2.5078 0.1915 0.3086 0.3322 0.2706 1.0035 0.2591 -0.7848 -0.6805 -0.8853 -0.3492 -0.5899 -0.9499
Actin 0.0418 0.0167 0.0262 0.0239 0.0183 0.0111 0.0257 0.016 0.0135 0.0213 0.0116 0.0104 0.0262 0.0148 0.0238 0.0072 0.004 0.0196
Bud 0.0015 0.0127 0.0024 0.0011 0.0094 0.0043 0.0022 0.0031 0.0023 0.0035 0.0023 0.0017 0.0017 0.0021 0.0039 0.002 0.0054 0.0011
Bud Neck 0.0035 0.0026 0.0032 0.001 0.0009 0.0119 0.0163 0.0016 0.0055 0.0019 0.0009 0.0062 0.0027 0.0015 0.0047 0.0006 0.001 0.0175
Bud Periphery 0.0052 0.0125 0.0088 0.0024 0.0265 0.0079 0.0048 0.0048 0.0042 0.0073 0.0041 0.004 0.0034 0.0035 0.0059 0.0059 0.0147 0.0032
Bud Site 0.0058 0.0479 0.0269 0.0025 0.0233 0.0027 0.0066 0.0421 0.0185 0.0079 0.0029 0.0029 0.0078 0.0292 0.0143 0.0013 0.0014 0.0014
Cell Periphery 0.0016 0.0034 0.0042 0.0003 0.0163 0.0015 0.0025 0.0019 0.001 0.0009 0.0006 0.0017 0.0014 0.003 0.0011 0.0008 0.0004 0.0017
Cytoplasm 0.0259 0.0676 0.0313 0.022 0.0164 0.0506 0.0474 0.1153 0.1006 0.0691 0.0381 0.095 0.0324 0.0987 0.0658 0.0761 0.0307 0.0676
Cytoplasmic Foci 0.0995 0.1057 0.0795 0.0681 0.0662 0.0974 0.0964 0.1067 0.0922 0.0887 0.1136 0.084 0.0877 0.0928 0.0782 0.0494 0.0667 0.0708
Eisosomes 0.0026 0.0007 0.0019 0.0004 0.0024 0.0004 0.0006 0.0008 0.0004 0.0005 0.0003 0.0002 0.0006 0.0011 0.0007 0.0005 0.0001 0.0004
Endoplasmic Reticulum 0.0062 0.0038 0.0043 0.0028 0.0192 0.0032 0.0072 0.0076 0.0068 0.0041 0.0044 0.0101 0.0087 0.0113 0.0078 0.0185 0.0019 0.0063
Endosome 0.1128 0.1317 0.0994 0.1324 0.1104 0.1289 0.2783 0.1934 0.2092 0.1559 0.2705 0.1823 0.2219 0.184 0.1342 0.2167 0.3238 0.2107
Golgi 0.0573 0.0537 0.0564 0.0666 0.0443 0.0431 0.0745 0.058 0.0592 0.0645 0.0711 0.0743 0.0652 0.0609 0.0566 0.033 0.1676 0.0869
Lipid Particles 0.0668 0.024 0.0188 0.0594 0.0182 0.0535 0.0301 0.0213 0.0222 0.0374 0.0203 0.0159 0.0403 0.026 0.0242 0.0181 0.0059 0.0313
Mitochondria 0.3376 0.3461 0.4277 0.3212 0.2695 0.3688 0.2737 0.1885 0.3201 0.4679 0.3213 0.3979 0.2928 0.1919 0.3304 0.2548 0.2995 0.3771
None 0.1335 0.0914 0.1155 0.1839 0.1916 0.1169 0.0462 0.1663 0.0843 0.0296 0.0464 0.0495 0.1461 0.2125 0.1899 0.1887 0.0018 0.0482
Nuclear Periphery 0.0068 0.0029 0.0038 0.0026 0.0033 0.0026 0.0147 0.003 0.0042 0.0013 0.0146 0.0065 0.0032 0.0059 0.0034 0.0081 0.0009 0.0029
Nucleolus 0.0047 0.0043 0.0015 0.0026 0.0029 0.0012 0.0016 0.0017 0.0012 0.0005 0.0014 0.0013 0.0013 0.0031 0.0021 0.0023 0.0003 0.0008
Nucleus 0.0041 0.0032 0.002 0.0013 0.0048 0.0022 0.0045 0.0039 0.0021 0.0011 0.0032 0.0064 0.0019 0.004 0.0035 0.0037 0.0012 0.0015
Peroxisomes 0.0574 0.0447 0.0695 0.0869 0.0786 0.0743 0.0201 0.0223 0.0235 0.0179 0.0145 0.0205 0.021 0.0107 0.0209 0.036 0.0061 0.0249
Punctate Nuclear 0.0119 0.0026 0.0033 0.0038 0.0627 0.0023 0.0048 0.0015 0.0018 0.0013 0.0385 0.0029 0.0036 0.0027 0.0041 0.0022 0.0002 0.0043
Vacuole 0.0084 0.0172 0.0087 0.0098 0.0088 0.0105 0.0296 0.0333 0.0191 0.0101 0.0109 0.0166 0.0222 0.0317 0.0167 0.0445 0.0482 0.0135
Vacuole Periphery 0.005 0.0047 0.0045 0.0052 0.006 0.0049 0.0122 0.007 0.0083 0.0074 0.0086 0.0098 0.0079 0.0085 0.0078 0.0299 0.0183 0.0083

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 3.3611 5.1508 2.5481 4.6589 4.9804 3.8391 5.642 4.9796 7.798 7.9136
Translational Efficiency 1.2246 0.7472 1.292 0.807 0.7801 1.0509 1.095 0.9541 0.6804 0.5847

Hit Data

Dataset Hit
Protein Concentration ✔
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1542 443 2127 433 945 856 1211 1205 2487 1299 3338 1638

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 685.94 723.37 782.16 803.92 670.62 709.73 816.39 815.83 680.12 714.38 794.58 812.68
Standard Deviation 90.24 91.44 84.92 100.58 86.97 90.28 94.75 108.56 89.32 90.91 90.13 106.64
Intensity Change Log 2 — 0.076651 0.189381 0.228970 — 0.081775 0.283763 0.282773 — 0.079186 0.236811 0.255818

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000706 0.002282 0.001692 0.002239 0.000827 0.001475 0.001332 0.004237 0.000752 0.001750 0.001561 0.003709
Bud Neck 0.026714 0.030494 0.048026 0.018727 0.027555 0.046569 0.024958 0.022139 0.027034 0.041087 0.039657 0.021237
Bud Site 0.015885 0.038283 0.032885 0.050522 0.022702 0.030135 0.017392 0.046537 0.018475 0.032914 0.027264 0.047591
Cell Periphery 0.000397 0.000500 0.000151 0.000282 0.000416 0.000420 0.000222 0.000300 0.000404 0.000447 0.000177 0.000295
Cytoplasm 0.098191 0.054149 0.312623* 0.210442* 0.141235* 0.094684 0.266828* 0.340103* 0.114547* 0.080860 0.296009* 0.305827*
Cytoplasmic Foci 0.234874* 0.154905 0.083231 0.104830 0.294233* 0.212254* 0.120412 0.093845 0.257429* 0.192696* 0.096720 0.096749
Eisosomes 0.000255 0.000187 0.000078 0.000155 0.000234 0.000221 0.000141 0.000149 0.000247 0.000209 0.000100 0.000151
Endoplasmic Reticulum 0.001926 0.000982 0.003696 0.005518 0.002968 0.001282 0.003100 0.002506 0.002322 0.001179 0.003480 0.003302
Endosome 0.080960 0.109544 0.024353 0.039424 0.075805 0.104050 0.044357 0.019334 0.079002 0.105923 0.031610 0.024645
Golgi 0.094640 0.083978 0.006564 0.008562 0.077279 0.047927 0.007959 0.005418 0.088043 0.060222 0.007070 0.006249
Lipid Particles 0.022798 0.013266 0.004287 0.008331 0.023761 0.018287 0.010734 0.004696 0.023164 0.016575 0.006626 0.005657
Mitochondria 0.284833* 0.286463* 0.026075 0.021401 0.192733* 0.208347* 0.022720 0.018448 0.249837* 0.234987* 0.024858 0.019229
Mitotic Spindle 0.005950 0.022891 0.052259 0.040574 0.007799 0.023300 0.022678 0.024006 0.006653 0.023160 0.041527 0.028386
None 0.002294 0.000903 0.002024 0.003341 0.001809 0.001620 0.003598 0.004514 0.002110 0.001376 0.002595 0.004204
Nuclear Periphery 0.000833 0.000322 0.003560 0.004463 0.000682 0.000702 0.001957 0.001689 0.000775 0.000572 0.002978 0.002422
Nuclear Periphery Foci 0.000361 0.000602 0.001100 0.004806 0.000586 0.000520 0.001574 0.001423 0.000447 0.000548 0.001272 0.002317
Nucleolus 0.002970 0.001117 0.003601 0.003022 0.002203 0.003439 0.005150 0.002869 0.002679 0.002647 0.004163 0.002910
Nucleus 0.024583 0.018855 0.259742* 0.168603* 0.028502 0.042162 0.301610* 0.197899* 0.026072 0.034214 0.274931* 0.190155*
Peroxisomes 0.048402 0.126374* 0.027657 0.028982 0.037014 0.076473 0.030161 0.035362 0.044075 0.093491 0.028565 0.033675
Vacuole 0.035590 0.043283 0.102746 0.269278* 0.047205 0.070711 0.108657 0.171419 0.040003 0.061357 0.104891 0.197288
Vacuole Periphery 0.016838 0.010620 0.003653 0.006499 0.014452 0.015422 0.004460 0.003107 0.015931 0.013784 0.003946 0.004003

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -3.40 -3.42 -1.82 1.20 0.06 -2.52 -2.18 -2.65 -1.70 -1.98 -4.35 -4.01 -3.08 -1.15 -1.70
Bud Neck -0.87 -6.45 4.34 3.76 10.65 -4.27 1.19 3.62 6.99 2.65 -4.32 -5.10 5.19 7.81 10.69
Bud Site -4.46 -6.33 -3.53 0.42 -0.99 -2.03 2.52 -2.87 -0.68 -4.90 -5.09 -3.95 -5.32 -0.19 -2.96
Cell Periphery -1.19 7.49 3.42 3.04 -3.12 -0.07 2.76 2.45 3.75 -0.49 -0.80 6.72 4.35 4.83 -2.78
Cytoplasm 5.63 -27.27 -9.24 -12.09 7.18 5.18 -11.87 -16.47 -22.75 -4.68 5.71 -28.57 -22.58 -26.19 0.42
Cytoplasmic Foci 7.83 26.29 19.89 7.23 -0.42 8.04 22.37 28.77 17.61 7.18 8.99 34.40 35.35 18.67 4.14
Eisosomes 3.22 13.50 7.67 2.57 -8.09 0.68 6.40 6.68 7.19 1.06 2.78 14.84 10.38 7.33 -5.45
Endoplasmic Reticulum 1.92 -4.49 -5.52 -7.64 -2.66 4.13 -1.16 -0.22 -6.54 1.36 3.63 -4.48 -4.09 -9.94 0.23
Endosome -3.53 16.97 11.64 10.43 -1.34 -4.24 7.89 15.70 16.62 8.48 -5.33 18.26 22.34 19.96 6.30
Golgi 1.53 21.84 20.21 11.84 0.31 5.21 15.12 15.92 12.94 3.17 6.48 26.53 26.89 17.47 2.67
Lipid Particles 3.30 11.62 9.06 2.57 -3.57 1.94 6.57 10.27 7.73 6.14 3.34 13.28 14.68 8.01 3.21
Mitochondria 0.08 31.70* 30.83* 17.30 2.71 -1.06 19.66 20.78 19.38 2.64 1.67 36.89 37.92* 25.81 4.63
Mitotic Spindle -5.04 -12.60 -4.12 -1.29 2.23 -4.64 -5.08 -4.13 1.00 1.22 -6.81 -13.45 -6.20 0.13 4.93
None 2.93 0.80 -0.16 -1.49 -0.50 -0.09 -2.02 -1.96 -1.72 -0.15 1.20 -0.92 -1.62 -2.31 -1.13
Nuclear Periphery 2.31 -6.41 -4.35 -5.15 -0.42 -0.08 -5.07 -4.07 -4.74 0.07 1.01 -7.76 -6.06 -7.14 1.37
Nuclear Periphery Foci -1.26 -5.34 -3.59 -3.18 -2.76 0.41 -5.05 -4.78 -5.07 0.51 -1.30 -7.28 -5.74 -5.06 -2.55
Nucleolus 4.20 -1.60 0.94 -2.77 2.57 -2.22 -4.03 -0.11 1.82 3.35 -0.54 -3.83 0.63 1.00 3.52
Nucleus 0.99 -39.34 -14.03 -13.88 7.67 -3.09 -31.15 -26.36 -22.53 8.00 -2.82 -50.12 -30.59 -26.92 10.28
Peroxisomes -7.39 7.47 6.58 9.97 1.70 -7.11 2.91 3.90 9.66 1.19 -9.55 7.84 7.80 13.70 1.60
Vacuole -1.87 -20.29 -22.53 -21.13 -16.29 -4.35 -14.48 -25.51 -21.25 -13.65 -5.89 -24.76 -34.61 -29.35 -21.49
Vacuole Periphery 3.22 11.42 9.08 3.77 -0.81 -0.42 7.68 8.58 7.92 2.24 1.56 13.78 13.14 8.83 1.66
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Protein that associates with mitochondrial ribosome; homozygous diploid deletion strain has a sporulation defect characterized by elevated dityrosine in the soluble fraction; expression induced by calcium shortage; YJL147W is a non-essential gene
Localization
Cell Percentages mitochondrion (73%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Smt1

Smt1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Smt1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available