Standard name
Human Ortholog
Description Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0.16 0.19 0.14 0.13 0.05 0.14 0.14 0.09 0.13 0.15 0.11 0.07 0.12 0.11 0.09 0.14 0.11 0.12 0.09 0.12 0.09 0.19 0.26 0.22
Bud 0.07 0.07 0.08 0.11 0.13 0.21 0.14 0.12 0.18 0.19 0.16 0.14 0 0.05 0 0.06 0.06 0 0.35 0.31 0.32 0.37 0.36 0.37
Bud Neck 0.27 0.25 0.25 0.24 0.37 0.23 0.23 0.18 0.22 0.2 0.23 0.2 0.31 0.36 0.35 0.22 0.27 0.15 0.43 0.37 0.43 0.33 0.26 0.27
Bud Site 0.26 0.22 0.25 0.41 0.19 0.23 0.17 0.16 0.14 0.1 0.11 0.12 0.16 0.06 0.1 0.09 0.13 0.12
Cell Periphery 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.06 0.06 0.07 0 0.07 0.07 0.08 0.1 0.06 0.05 0.09 0.06 0.07 0.09 0.1 0.09 0.12 0.13 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.06 0 0.07 0.09 0.07 0.14 0.23 0.14 0.22 0.23 0.2 0.26 0 0 0 0.1 0.08 0.12 0 0 0 0 0 0
Nucleus 0 0.05 0.05 0 0.07 0 0 0.05 0 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.27 0.27 0.17 0.19 0.36 0.24 0.26 0.32 0.26 0.27 0.29 0.35 0.14 0.11 0.17 0.31 0.34 0.33 0 0.06 0 0 0 0
Peroxisomes 0.1 0 0.07 0.08 0 0.11 0.1 0.12 0.09 0.08 0.06 0 0.1 0.08 0.1 0.05 0.05 0.07 0 0 0 0 0 0
SpindlePole 0.06 0 0.11 0.1 0.07 0 0 0.05 0.06 0.06 0.06 0.07 0.16 0.27 0.18 0.12 0.1 0.13 0 0 0.05 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 30 25 24 15 7 20 25 17 22 26 21 14 39 44 33 40 27 22 22 23 20 69 109 99
Bud 13 9 13 13 18 31 25 23 31 32 30 26 14 20 11 18 16 7 90 60 71 133 156 163
Bud Neck 52 33 42 28 50 34 42 35 37 35 44 38 100 141 136 64 67 28 111 71 96 121 110 121
Bud Site 51 29 41 48 26 34 31 32 23 17 20 22 53 24 39 25 32 23
Cell Periphery 5 3 6 2 0 2 4 7 9 4 4 4 4 11 7 4 2 1 0 0 0 3 3 6
Cytoplasm 11 8 12 4 10 10 15 19 11 8 18 11 22 36 37 26 31 24 4 0 1 4 7 5
Endoplasmic Reticulum 2 2 1 1 1 5 2 1 3 4 3 5 3 1 2 5 6 1 0 1 2 0 2 2
Endosome 9 2 3 1 1 3 5 4 7 3 5 2 8 13 14 10 9 10 1 2 1 6 5 7
Golgi 0 0 1 0 1 0 0 1 0 1 0 0 5 4 1 12 11 1 0 0 2 0 2 1
Mitochondria 12 5 11 11 9 21 42 28 38 40 38 48 1 1 2 28 21 23 2 2 1 7 9 10
Nucleus 8 6 9 5 9 4 4 9 3 7 5 14 10 12 13 8 1 1 3 3 0 0 0 0
Nuclear Periphery 1 0 0 2 0 2 0 1 1 1 0 1 0 0 0 0 0 0 0 3 1 3 6 4
Nucleolus 53 36 28 22 49 35 47 64 45 47 55 65 45 45 64 89 84 61 4 12 5 2 1 1
Peroxisomes 19 4 12 9 6 16 18 24 16 13 11 5 34 30 38 15 12 14 3 0 2 2 5 8
SpindlePole 12 2 18 12 10 4 7 9 11 11 12 13 51 106 68 35 26 24 5 3 10 2 1 5
Vac/Vac Membrane 3 3 3 0 2 0 1 5 0 1 0 3 7 12 11 14 3 6 3 3 0 2 1 1
Unique Cell Count 193 131 167 117 136 146 179 198 170 171 190 187 327 396 386 291 248 187 256 193 222 365 428 443
Labelled Cell Count 281 167 224 173 199 221 268 279 257 250 266 271 396 500 476 393 348 246 256 193 222 365 428 443


Bud Neck, Cell Periphery

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 11.5 15.3 11.7 10.2 9.9 10.2 10.0 9.6 9.3 9.1 8.7 8.7 14.4 13.7 12.9 18.9 17.5 17.8 13.7 14.2 14.4
Std Deviation (1e-4) 3.5 4.3 3.7 2.8 3.5 4.6 3.9 3.7 2.9 2.8 3.2 2.9 3.5 3.7 4.1 6.9 6.6 7.1 3.1 2.8 2.8
Intensity Change (Log2) -0.19 -0.23 -0.19 -0.23 -0.28 -0.33 -0.36 -0.43 -0.43 0.3 0.23 0.15 0.69 0.58 0.61 0.23 0.28 0.3


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches -0.4 -2.6 -0.2 -0.1 -1.7 -0.4 0.2 -0.9 -2.1 -0.8 -1.1 -2.1 -0.2 -1.1 -0.7
Bud 1.0 1.6 3.4 1.8 1.2 2.8 3.0 2.3 1.8 -1.6 -1.3 -2.6 -0.7 -0.5 -1.6
Bud Neck -0.2 2.2 -0.4 -0.4 -1.7 -0.7 -1.0 -0.4 -1.1 1.3 2.4 2.3 -0.8 0.4 -2.4
Bud Site 2.9 -1.1 -0.3 -1.7 -2.0 -2.6 -3.6 -3.5 -3.1 -2.2 -6.3 -4.4 -4.7 -3.1 -3.0
Cell Periphery 0 0 0 0 0 0.8 0 0 0 0 -0.5 0 0 0 0
Cytoplasm -1.4 0.1 -0.1 0.4 0.8 -0.3 -1.0 0.8 -0.5 -0.2 0.7 0.9 0.7 1.7 1.8
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 1.1 0 0 1.8
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.9 0 2.3 4.4 2.3 4.1 4.3 3.7 4.8 0 0 0 1.1 0.7 1.8
Nucleus -0.4 0.4 -1.2 -1.5 -0.4 -1.8 -0.6 -1.3 0.8 -1.3 -1.3 -1.1 -1.4 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.4 3.8 1.6 2.1 3.4 2.2 2.4 2.7 3.8 -0.9 -1.7 -0.1 3.3 3.8 3.4
Peroxisomes 0.2 -1.0 1.2 0.9 1.6 0.7 0.1 -0.5 -2.0 1.2 0.2 1.0 -0.9 -1.0 0.1
SpindlePole -0.1 -1.0 -2.8 -2.5 -2.3 -1.4 -1.4 -1.5 -1.3 1.5 4.2 2.0 0.4 -0.1 0.6
Vacuole 0 0 0 0 0 0 0 0 0 0 0 0 1.6 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration
Actin
Bud
Bud Neck
Bud Periphery
Bud Site
Cell Periphery
Cytoplasm
Cytoplasmic Foci
Eisosomes
Endoplasmic Reticulum
Endosome
Golgi
Lipid Particles
Mitochondria
None
Nuclear Periphery
Nucleolus
Nucleus
Peroxisomes
Punctate Nuclear
Vacuole
Vacuole Periphery

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 70.289 81.4076 63.3404 64.4591 72.7916 83.9466 92.5002 98.9733 78.4099 76.4304
Translational Efficiency 1.4579 1.4716 1.1545 1.2163 1.2321 1.0873 1.1978 0.8887 0.9337 1.1049

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
260 275 1997 1168 1375 1332 374 1073 1635 1607 2371 2241

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1110.15 1332.97 1396.84 1604.40 1173.60 1199.61 1611.72 1644.26 1163.51 1222.43 1430.74 1623.49
Standard Deviation 197.07 271.88 299.57 346.08 216.48 229.52 306.29 331.66 214.77 242.56 310.68 339.84
Intensity Change Log 2 0.263890 0.331412 0.531279 0.031625 0.457660 0.486498 0.149203 0.397668 0.508440

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.015665 0.010682 0.002772 0.011909 0.020743 0.005840 0.010736 0.022902 0.019936 0.006669 0.004028 0.017172
Bud Neck 0.238026* 0.207035* 0.312230* 0.205078* 0.251444* 0.271109* 0.251557* 0.193759* 0.249310* 0.260144* 0.302660* 0.199659*
Bud Site 0.587341* 0.599927* 0.553985* 0.659131* 0.534196* 0.578364* 0.535059* 0.682039* 0.542647* 0.582054* 0.551000* 0.670099*
Cell Periphery 0.005959 0.004516 0.010545 0.005123 0.016740 0.012206 0.005273 0.005561 0.015025 0.010890 0.009713 0.005333
Cytoplasm 0.023975 0.030054 0.020892 0.019604 0.018486 0.023405 0.019362 0.027230 0.019359 0.024543 0.020651 0.023255
Cytoplasmic Foci 0.033006 0.068162 0.042500 0.041109 0.063890 0.039951 0.097671 0.025096 0.058979 0.044778 0.051202 0.033442
Eisosomes 0.004150 0.005034 0.007178 0.004177 0.017341 0.010355 0.007537 0.003118 0.015244 0.009445 0.007235 0.003670
Endoplasmic Reticulum 0.001737 0.000355 0.000479 0.000177 0.001006 0.000646 0.000727 0.000281 0.001122 0.000596 0.000518 0.000227
Endosome 0.004833 0.005183 0.001602 0.001310 0.002637 0.003604 0.001473 0.002568 0.002986 0.003874 0.001582 0.001912
Golgi 0.001857 0.002556 0.000692 0.002124 0.001264 0.001456 0.000817 0.001824 0.001358 0.001644 0.000711 0.001980
Lipid Particles 0.000378 0.000352 0.000198 0.000144 0.000648 0.000496 0.000278 0.000745 0.000605 0.000471 0.000211 0.000432
Mitochondria 0.029325 0.009471 0.007857 0.011914 0.017635 0.013152 0.003792 0.005183 0.019494 0.012522 0.007216 0.008691
Mitotic Spindle 0.002381 0.002702 0.002704 0.003473 0.001375 0.004359 0.002396 0.003454 0.001535 0.004076 0.002656 0.003464
None 0.000545 0.000391 0.000456 0.000333 0.000743 0.001422 0.000222 0.000244 0.000712 0.001245 0.000419 0.000290
Nuclear Periphery 0.000064 0.000044 0.000140 0.000098 0.000041 0.000055 0.000084 0.000110 0.000045 0.000053 0.000131 0.000104
Nuclear Periphery Foci 0.000668 0.000740 0.000973 0.000463 0.001492 0.001016 0.000943 0.000416 0.001361 0.000969 0.000968 0.000440
Nucleolus 0.002886 0.006302 0.003530 0.005173 0.005673 0.002207 0.013665 0.001819 0.005230 0.002908 0.005129 0.003567
Nucleus 0.004894 0.003137 0.003018 0.003176 0.003007 0.002782 0.006031 0.002358 0.003307 0.002842 0.003493 0.002784
Peroxisomes 0.021159 0.029460 0.012213 0.010553 0.028357 0.014519 0.019051 0.006833 0.027212 0.017076 0.013292 0.008772
Vacuole 0.018641 0.012557 0.015170 0.012902 0.012458 0.011963 0.022008 0.011902 0.013442 0.012064 0.016249 0.012423
Vacuole Periphery 0.002508 0.001340 0.000866 0.002029 0.000824 0.001092 0.001318 0.002558 0.001092 0.001135 0.000937 0.002282

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 0.77 2.33 0.65 -0.31 -4.60 5.97 2.60 -0.45 -5.03 -2.66 5.66 7.08 1.05 -5.02 -6.67
Bud Neck 1.61 -4.65 2.23 0.20 13.03 -2.01 0.41 6.47 8.27 4.46 -1.20 -6.43 6.95 8.12 15.28
Bud Site -0.46 1.78 -3.63 -3.05 -10.88 -3.95 0.34 -12.76 -8.84 -9.09 -3.82 -0.69 -13.78 -9.46 -15.19
Cell Periphery 1.29 -3.61 0.83 -0.68 5.39 2.54 5.41 7.05 5.34 -0.25 2.75 3.72 7.40 5.55 5.12
Cytoplasm -1.03 0.50 0.88 2.01 0.90 -2.27 -0.86 -4.32 -2.17 -2.21 -2.52 -1.51 -2.99 -0.06 -1.73
Cytoplasmic Foci -3.72 -2.14 -1.57 3.02 0.65 5.10 -3.25 8.46 3.56 7.09 3.28 1.63 6.60 3.13 5.50
Eisosomes -0.83 -3.20 0.02 1.12 4.66 4.26 6.29 10.24 7.66 5.00 4.18 6.48 9.81 7.27 6.85
Endoplasmic Reticulum 1.09 0.96 1.23 1.23 2.56 1.09 -0.10 2.60 1.91 2.42 1.53 1.59 2.91 2.34 3.03
Endosome -0.18 3.36 3.70 2.54 0.74 -1.44 2.40 0.09 1.22 -1.42 -1.40 3.26 2.28 3.06 -0.69
Golgi -0.72 2.83 -0.27 0.39 -1.78 -0.52 1.89 -0.83 -0.48 -1.50 -0.82 3.96 -1.13 -0.52 -2.42
Lipid Particles 0.16 1.11 1.75 1.65 0.80 0.45 0.72 -0.45 -0.79 -0.97 0.47 1.30 0.23 -0.20 -1.06
Mitochondria 2.53 2.99 2.37 -0.68 -2.24 1.60 5.91 5.26 4.05 -1.17 2.61 5.39 4.54 2.06 -1.28
Mitotic Spindle -0.39 -0.83 -1.34 -0.61 -0.79 -3.39 -2.28 -2.62 0.66 -0.84 -3.40 -3.55 -3.55 0.59 -1.08
None 1.39 0.98 2.23 0.82 2.81 -0.89 6.58 6.28 1.53 -0.57 -0.84 4.28 6.49 1.50 3.40
Nuclear Periphery 1.26 -0.93 -1.55 -2.64 0.44 -1.63 -3.46 -1.71 -1.36 0.21 -1.12 -1.37 -2.75 -2.31 0.42
Nuclear Periphery Foci -0.37 -0.97 0.95 1.42 1.76 2.18 1.55 5.47 3.44 3.31 2.08 1.33 5.76 3.81 2.30
Nucleolus -1.15 -0.47 -1.59 0.42 -1.73 2.91 -2.30 3.18 0.69 3.52 2.07 0.07 1.56 -0.83 1.95
Nucleus 0.67 0.75 0.62 -0.20 -0.43 0.37 -2.22 0.37 -0.01 2.28 0.71 -1.48 0.08 -0.75 1.73
Peroxisomes -1.16 2.30 2.70 3.06 1.29 5.27 3.03 8.97 4.64 4.91 4.03 6.61 8.91 4.92 4.32
Vacuole 1.60 0.82 1.59 -0.35 1.83 0.40 -3.61 -0.54 -0.80 3.27 1.16 -3.05 0.12 -1.06 3.19
Vacuole Periphery 1.25 1.85 0.47 -1.20 -2.32 -0.81 -1.64 -2.26 -1.81 -1.40 -0.11 0.63 -2.50 -2.29 -2.92
Standard name
Human Ortholog
Description Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells
Localization
Cell Percentages
Cell Cycle Regulation No
Subcompartmental Group N/A

Cdc11

Cdc11


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Cdc11-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available