ORF
Human Ortholog
Description Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0 0.05 0.06 0 0 0.05 0.08 0 0 0 0.11 0.17 0.2 0.13 0.16 0.13 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.43 0.14 0 0.08 0.11 0.31 0.49 0.33 0.4 0.61 0.65 0.59 0 0 0 0 0.08 0 0 0 0 0 0 0
Nucleus 0.86 0.9 0.95 0.92 0.88 0.84 0.75 0.79 0.75 0.76 0.75 0.76 0.88 0.82 0.78 0.71 0.71 0.69 0.79 0.87 0.83 0.78 0.66 0.6
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.15 0.17 0.14 0.07 0.09 0.11 0.16 0.19
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1
Bud 1 0 0 0 1 4 7 3 6 3 4 4 0 0 0 2 0 0 3 1 1 2 5 6
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 3
Bud Site 1 0 0 0 0 3 8 12 4 18 7 6 0 0 0 0 1 1
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 7 2 5 8 13 16 15 21 17 15 8 8 29 88 93 26 38 21 1 1 1 10 17 13
Endoplasmic Reticulum 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 14 8 5 0 0 0 0 0 1
Endosome 3 0 1 0 3 1 2 3 2 0 0 0 0 1 0 7 4 2 1 0 0 3 6 6
Golgi 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 3 2 0 0 0 0 0 1 4
Mitochondria 121 16 5 12 25 118 247 144 87 250 149 155 2 0 0 4 19 6 5 0 3 4 13 15
Nucleus 244 103 176 146 200 315 380 344 162 308 173 200 236 413 363 142 174 110 248 104 173 280 305 326
Nuclear Periphery 4 0 1 0 2 2 3 3 4 3 5 5 0 0 1 0 0 0 0 0 0 0 0 2
Nucleolus 5 0 0 0 1 4 18 11 2 5 14 9 0 0 0 0 0 0 0 1 1 5 15 22
Peroxisomes 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
SpindlePole 4 0 1 0 0 0 1 6 1 0 0 1 0 5 1 1 0 2 2 0 2 8 14 21
Vac/Vac Membrane 6 7 3 5 4 10 17 8 8 9 10 3 2 11 12 20 36 27 43 7 19 39 72 104
Unique Cell Count 284 114 186 159 226 377 507 434 217 407 231 263 269 506 465 199 245 160 315 119 208 358 463 541
Labelled Cell Count 397 128 192 171 249 473 699 555 294 611 370 391 269 518 471 220 282 174 315 119 208 358 463 541


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.9 4.7 5.2 5.0 4.7 4.2 4.0 4.1 4.1 3.7 3.7 3.5 6.2 6.3 6.2 6.1 6.1 6.4 6.1 6.3 6.5
Std Deviation (1e-4) 0.5 0.7 1.4 2.5 1.3 1.6 1.3 1.6 1.6 0.8 1.3 0.9 1.0 1.1 1.1 1.2 1.5 1.4 1.1 1.2 1.3
Intensity Change (Log2) -0.06 -0.14 -0.29 -0.37 -0.35 -0.32 -0.48 -0.48 -0.55 0.27 0.28 0.27 0.25 0.24 0.3 0.24 0.28 0.34

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP7000246WT3HU80HU120HU1600246WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30246WT1AF100AF140AF1800246
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud 0 0 0
Bud Neck 0 0 0
Bud Site 0 0 0
Cell Periphery 0 0 0
Cyto
Endoplasmic Reticulum 0 0 0
Endosome 0 0 0
Golgi 0 0 0
Mitochondria 0 0 0
Nuclear Periphery 0 0 0
Nuc
Nucleolus 0 0 0
Peroxisomes 0 0 0
SpindlePole 0 0 0
Vac
Cortical Patches 0 0 0
Cytoplasm 0 0 0
Nucleus 0 0 0
Vacuole 3.5 4.7 5.0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 1.2576 1.845 1.4236 1.6821 1.0996 1.5933 0.5389 0.1659 0.1947 -0.0016 0.6598 0.2625 0.2725 0.5557 0.2044 0.0649 -0.4513 0.1807
Actin 0.0002 0.0001 0.0029 0.0001 0.0001 0.0001 0.065 0.0001 0.0009 0.0019 0.0009 0.0083 0.0055 0 0.0065 0.0153 0.0001 0.0099
Bud 0 0 0.0001 0 0.0001 0.0001 0.0007 0.0001 0.0005 0.0008 0.0002 0.0006 0.0005 0 0.0012 0.0166 0.0001 0.0046
Bud Neck 0.0002 0.0002 0.0003 0.0001 0.0032 0.0028 0.0084 0.0003 0.0028 0.0015 0.0014 0.0028 0.0017 0.0001 0.0008 0.0003 0.0008 0.0017
Bud Periphery 0 0 0.0003 0 0.0005 0.0001 0.0015 0.0001 0.0013 0.0032 0.0002 0.0009 0.0006 0 0.001 0.0047 0 0.0013
Bud Site 0.0002 0.0002 0.0002 0 0.0002 0.0001 0.0048 0.0004 0.0054 0.0017 0.0008 0.0007 0.0024 0.0002 0.0084 0.0026 0.0001 0.0007
Cell Periphery 0.0001 0 0 0 0.0002 0 0.0005 0 0.0001 0.0003 0.0001 0.0001 0.0002 0 0.0002 0.0002 0 0.0001
Cytoplasm 0.0208 0.0056 0.0094 0.0032 0.0088 0.0107 0.0469 0.0225 0.0123 0.0038 0.021 0.012 0.037 0.0097 0.0201 0.0042 0.0091 0.0087
Cytoplasmic Foci 0.0004 0.0001 0.0008 0 0.0007 0.0051 0.0252 0.0004 0.0059 0.0016 0.0038 0.0063 0.0309 0.01 0.0039 0.0024 0.0028 0.0062
Eisosomes 0.0001 0 0 0 0 0 0.0004 0 0 0.0001 0 0.0001 0.0001 0 0.0001 0.0003 0 0.0001
Endoplasmic Reticulum 0.0011 0.0002 0.001 0.0001 0.0002 0.0004 0.0064 0.0021 0.0013 0.0006 0.0014 0.0012 0.0031 0.0003 0.0026 0.0004 0.0002 0.0018
Endosome 0.0007 0.0002 0.0026 0.0001 0.0003 0.0004 0.0334 0.001 0.0032 0.0163 0.0421 0.0092 0.0281 0.0011 0.0097 0.0058 0.0005 0.0075
Golgi 0 0 0.0003 0 0 0 0.0125 0 0.0011 0.0305 0.0322 0.0052 0.0081 0.0001 0.0015 0.0052 0 0.004
Lipid Particles 0.0001 0 0.0008 0 0.0001 0.0001 0.0334 0.0001 0.0024 0.0006 0.0066 0.01 0.0169 0.0004 0.0015 0.0037 0.0001 0.0061
Mitochondria 0.0005 0.0002 0.0043 0.0003 0.0004 0.0012 0.0166 0.0004 0.0013 0.0089 0.0062 0.018 0.005 0.0003 0.0016 0.0284 0.0002 0.0032
None 0.0937 0.0349 0.0332 0.0002 0.0422 0.0338 0.0172 0.0081 0.0013 0.0006 0.042 0.0148 0.0329 0.0221 0.0226 0.0035 0.0019 0.0027
Nuclear Periphery 0.0133 0.0239 0.0202 0.0093 0.0066 0.0031 0.0235 0.0192 0.0146 0.0382 0.0115 0.0087 0.028 0.011 0.0153 0.0033 0.007 0.0116
Nucleolus 0.0061 0.0065 0.0057 0.0028 0.0103 0.0155 0.0093 0.0073 0.0063 0.0143 0.0163 0.0158 0.0182 0.0036 0.0042 0.0061 0.0111 0.0113
Nucleus 0.8431 0.9078 0.8955 0.9816 0.9155 0.898 0.6327 0.926 0.9217 0.8674 0.7935 0.8461 0.7294 0.9378 0.8759 0.8538 0.8764 0.9014
Peroxisomes 0 0 0.0002 0 0 0.0001 0.0254 0 0.0021 0.0003 0.0004 0.0062 0.0172 0 0.0069 0.0028 0 0.0013
Punctate Nuclear 0.0182 0.0193 0.0209 0.0017 0.0089 0.028 0.0212 0.0104 0.0109 0.0037 0.0162 0.0288 0.0296 0.0027 0.013 0.0387 0.0892 0.014
Vacuole 0.0009 0.0003 0.0006 0.0001 0.0015 0.0004 0.0097 0.0011 0.0037 0.0023 0.002 0.0031 0.0027 0.0004 0.0022 0.0011 0.0002 0.0009
Vacuole Periphery 0.0002 0.0003 0.0006 0.0001 0.0002 0.0001 0.0052 0.0003 0.0009 0.0014 0.0014 0.001 0.0018 0.0002 0.0009 0.0007 0.0001 0.0007

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 11.7107 13.9582 9.7821 11.4562 14.0587 11.2707 13.133 10.0546 11.0493 11.3451
Translational Efficiency 0.95 0.6111 0.8145 0.7616 0.6032 0.6652 0.7555 0.7983 0.7849 0.7676

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1791 464 188 449 1304 1412 534 476 3095 1876 722 925

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 703.30 776.26 980.55 875.19 710.57 752.06 983.22 927.45 706.36 758.05 982.52 902.08
Standard Deviation 81.74 112.04 95.58 121.56 83.54 95.05 121.87 132.23 82.58 100.07 115.60 129.82
Intensity Change Log 2 0.142400 0.479451 0.315456 0.081871 0.468537 0.384293 0.112297 0.473976 0.350462

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000071 0.000589 0.001150 0.000916 0.000111 0.000157 0.000695 0.000595 0.000088 0.000264 0.000813 0.000751
Bud Neck 0.001842 0.010188 0.004475 0.017852 0.001741 0.005357 0.006209 0.008484 0.001799 0.006552 0.005757 0.013032
Bud Site 0.000510 0.003650 0.001032 0.004431 0.000617 0.000911 0.001520 0.005920 0.000555 0.001589 0.001393 0.005197
Cell Periphery 0.000095 0.000122 0.000083 0.000200 0.000157 0.000091 0.000066 0.000156 0.000121 0.000098 0.000070 0.000177
Cytoplasm 0.034214 0.044451 0.003093 0.045432 0.042955 0.049443 0.002777 0.051146 0.037897 0.048209 0.002859 0.048373
Cytoplasmic Foci 0.005733 0.013262 0.000208 0.000689 0.006910 0.007051 0.000061 0.000670 0.006229 0.008587 0.000099 0.000679
Eisosomes 0.000017 0.000047 0.000055 0.000031 0.000023 0.000020 0.000028 0.000023 0.000019 0.000026 0.000035 0.000027
Endoplasmic Reticulum 0.001645 0.006056 0.012202 0.014271 0.001518 0.002045 0.008185 0.008544 0.001591 0.003037 0.009231 0.011324
Endosome 0.000342 0.001174 0.000496 0.001149 0.000746 0.001278 0.000828 0.001187 0.000512 0.001252 0.000741 0.001169
Golgi 0.000158 0.000190 0.000076 0.000195 0.000278 0.000598 0.000052 0.004373 0.000209 0.000497 0.000059 0.002345
Lipid Particles 0.001209 0.002912 0.000638 0.000405 0.001536 0.001809 0.000206 0.000299 0.001347 0.002082 0.000319 0.000350
Mitochondria 0.001588 0.005615 0.000891 0.001844 0.002819 0.004303 0.000980 0.001849 0.002107 0.004627 0.000957 0.001846
Mitotic Spindle 0.002063 0.001328 0.000137 0.007043 0.000809 0.007275 0.000365 0.012443 0.001535 0.005804 0.000306 0.009822
None 0.005832 0.009711 0.003794 0.007391 0.008669 0.004224 0.002265 0.010494 0.007027 0.005581 0.002664 0.008988
Nuclear Periphery 0.001036 0.001664 0.000899 0.002342 0.000761 0.001563 0.000538 0.002004 0.000920 0.001588 0.000632 0.002168
Nuclear Periphery Foci 0.000350 0.001301 0.000276 0.001109 0.001405 0.000302 0.000082 0.000256 0.000795 0.000549 0.000132 0.000670
Nucleolus 0.003793 0.006341 0.004064 0.001810 0.005629 0.004677 0.001805 0.001440 0.004566 0.005089 0.002393 0.001619
Nucleus 0.937637 0.880534 0.957898 0.875766 0.920714 0.902994 0.967304 0.875886 0.930507 0.897438 0.964855 0.875827
Peroxisomes 0.000779 0.003397 0.000260 0.000155 0.000649 0.001692 0.000134 0.000111 0.000724 0.002114 0.000167 0.000133
Vacuole 0.000974 0.006923 0.008138 0.015292 0.001630 0.003617 0.005733 0.011781 0.001250 0.004435 0.006359 0.013485
Vacuole Periphery 0.000112 0.000545 0.000135 0.001677 0.000323 0.000592 0.000169 0.002337 0.000201 0.000581 0.000160 0.002017

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -6.10 -12.39 -11.61 -2.97 2.54 -1.33 -11.52 -11.11 -10.38 -0.14 -5.95 -16.78 -16.15 -10.98 0.43
Bud Neck -4.49 -6.90 -6.89 -2.87 -5.13 -3.57 -5.89 -9.45 -5.73 -3.80 -5.43 -7.17 -10.63 -6.32 -5.77
Bud Site -3.46 -4.04 -5.75 -0.65 -3.87 -1.22 -2.57 -2.68 -2.47 -1.83 -3.59 -3.53 -4.78 -3.36 -3.14
Cell Periphery -2.30 -0.50 -3.04 -1.38 -2.73 3.06 3.91 1.24 -1.87 -2.82 1.60 3.31 -1.49 -2.84 -4.23
Cytoplasm -2.29 13.35 -0.38 1.47 -6.95 -1.54 12.68 1.44 2.66 -7.09 -3.35 18.57 0.62 3.13 -9.99
Cytoplasmic Foci -2.71 6.41 6.07 5.01 -1.83 -0.41 7.19 6.71 7.01 -3.67 -2.10 9.50 8.87 8.54 -4.27
Eisosomes -6.82 -8.90 -8.71 2.00 4.27 1.43 -3.72 -5.85 -7.11 -1.35 -4.55 -8.87 -10.62 -4.95 0.90
Endoplasmic Reticulum -5.89 -12.93 -12.12 -5.68 -0.32 -3.67 -13.37 -12.39 -11.65 -2.42 -6.59 -17.76 -17.15 -13.91 -3.09
Endosome -4.11 -2.58 -4.17 0.81 -0.95 -1.74 0.22 -0.97 0.77 -0.84 -3.49 -0.64 -3.22 1.00 -1.07
Golgi -0.39 1.00 0.25 0.85 -0.96 -1.35 1.67 -0.88 -0.68 -1.03 -1.77 2.14 -0.88 -0.53 -1.07
Lipid Particles -3.22 2.07 3.37 4.80 2.38 -1.04 6.41 5.30 4.84 -4.72 -2.80 6.43 5.79 6.58 -2.33
Mitochondria -1.90 1.27 -0.76 1.71 -3.04 -1.25 2.00 1.08 2.83 -2.67 -2.71 2.30 0.38 3.25 -3.85
Mitotic Spindle 0.78 1.56 -2.80 -2.99 -3.15 -3.59 0.54 -3.61 -1.66 -3.69 -3.07 1.69 -4.46 -2.63 -4.83
None -1.53 2.12 -0.62 1.18 -2.39 3.62 5.44 0.56 -1.55 -2.63 1.73 6.30 0.04 -1.15 -3.94
Nuclear Periphery -1.87 -1.18 -6.73 -2.96 -5.70 -5.56 0.26 -7.65 -4.81 -7.81 -4.89 0.64 -10.03 -6.04 -10.36
Nuclear Periphery Foci -1.86 -0.94 -2.80 0.84 -1.73 1.57 1.94 1.32 -1.42 -4.10 0.38 2.00 0.09 -0.45 -4.15
Nucleolus -3.09 -0.04 3.45 5.20 2.21 0.92 5.59 5.73 3.90 0.45 -0.76 5.33 6.74 5.17 1.46
Nucleus 6.32 -1.70 7.34 0.72 8.01 2.68 -7.03 5.15 3.21 9.63 6.45 -7.06 8.99 3.59 13.02
Peroxisomes -2.95 2.44 2.94 3.84 3.79 -2.30 5.08 5.22 3.57 0.78 -3.26 4.09 4.31 5.10 2.13
Vacuole -5.77 -6.42 -7.09 -4.82 -3.26 -3.75 -4.21 -7.16 -6.60 -5.52 -6.88 -6.79 -10.05 -8.61 -6.77
Vacuole Periphery -3.54 -2.15 -1.16 -0.48 -1.07 -1.01 1.32 -0.85 -0.50 -1.08 -2.01 0.75 -1.42 -0.65 -1.52
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Componentsactinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
ORF
Human Ortholog
Description Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome
Localization
Cell Percentages nucleus (93%)
Cell Cycle Regulation No
Subcompartmental Group nucleus-3

YJR084W

YJR084W


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Yjr084w-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available