Standard name | |
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Human Ortholog | |
Description | Major apurinic/apyrimidinic endonuclease; 3'-repair diesterase; involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine; genetically interacts with NTG1 to maintain mitochondrial genome integrity |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 2 | 4 | 11 | 5 | 6 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 2 | 4 | 6 | 8 | 11 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 3 | 18 | 8 | 12 | 5 | 0 | 0 | 0 | 0 | 0 | 1 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 4 | 14 | 20 | 17 | 35 | 37 | 53 | 50 | 42 | 43 | 45 | 68 | 25 | 48 | 84 | 29 | 6 | 21 | 1 | 2 | 6 | 9 | 10 | 11 |
Endoplasmic Reticulum | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 1 | 1 |
Endosome | 0 | 2 | 0 | 3 | 10 | 0 | 0 | 4 | 0 | 0 | 0 | 2 | 0 | 4 | 6 | 3 | 1 | 0 | 3 | 5 | 1 | 2 | 8 | 16 |
Golgi | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 0 | 1 | 0 | 1 | 0 | 4 | 1 | 3 | 1 | 4 |
Mitochondria | 38 | 8 | 4 | 12 | 25 | 88 | 164 | 141 | 314 | 257 | 304 | 199 | 9 | 6 | 4 | 7 | 1 | 5 | 4 | 6 | 13 | 12 | 21 | 32 |
Nucleus | 126 | 244 | 199 | 238 | 317 | 290 | 318 | 330 | 287 | 280 | 224 | 265 | 300 | 329 | 391 | 154 | 88 | 165 | 118 | 212 | 175 | 220 | 206 | 164 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 4 | 2 | 7 | 10 | 5 | 8 | 2 | 3 | 1 | 1 | 1 | 2 | 5 | 5 | 0 | 1 | 0 | 0 | 2 | 7 |
Nucleolus | 0 | 2 | 0 | 1 | 1 | 2 | 12 | 8 | 6 | 8 | 10 | 8 | 2 | 5 | 5 | 9 | 6 | 9 | 0 | 0 | 0 | 4 | 20 | 25 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 8 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 0 | 2 | 1 | 0 | 1 | 0 | 1 | 4 | 1 | 5 | 0 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 4 | 2 | 5 | 6 | 4 | 18 |
Vac/Vac Membrane | 7 | 45 | 17 | 12 | 26 | 14 | 24 | 21 | 30 | 27 | 28 | 46 | 5 | 18 | 48 | 14 | 9 | 8 | 26 | 72 | 44 | 93 | 155 | 182 |
Unique Cell Count | 157 | 295 | 236 | 276 | 398 | 372 | 487 | 486 | 506 | 504 | 427 | 463 | 340 | 402 | 522 | 206 | 111 | 203 | 165 | 314 | 263 | 365 | 443 | 489 |
Labelled Cell Count | 176 | 319 | 241 | 283 | 420 | 435 | 589 | 575 | 708 | 650 | 630 | 603 | 348 | 421 | 549 | 222 | 118 | 218 | 165 | 314 | 263 | 365 | 443 | 489 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.3 | 7.6 | 7.3 | 6.6 | 6.7 | 5.5 | 5.3 | 5.8 | 4.5 | 4.6 | 4.1 | 4.7 | 7.5 | 7.9 | 7.7 | 11.2 | 12.0 | 11.9 | 7.2 | 7.5 | 8.0 |
Std Deviation (1e-4) | 1.5 | 1.9 | 1.9 | 1.7 | 2.1 | 1.9 | 2.0 | 2.3 | 1.5 | 1.3 | 1.5 | 1.8 | 2.1 | 2.5 | 2.3 | 3.8 | 3.1 | 3.4 | 1.9 | 2.1 | 2.4 |
Intensity Change (Log2) | – | – | – | -0.15 | -0.11 | -0.41 | -0.46 | -0.32 | -0.71 | -0.67 | -0.84 | -0.64 | 0.05 | 0.13 | 0.09 | 0.63 | 0.72 | 0.72 | -0.02 | 0.05 | 0.14 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.0 | 0.1 | 0.6 | 1.0 | 0.8 | -0.1 | 0 | 0.9 | 2.3 | -0.5 | 1.4 | 2.8 | 1.9 | -1.0 | 0.7 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1.7 | 2.7 | 7.4 | 9.5 | 8.6 | 0 | 0 | 0 | 0 | 0.8 | 0 | 0 | 1.1 | 0 | 0 |
Nucleus | 0.6 | -1.5 | -1.9 | -5.3 | -4.7 | -7.4 | -7.6 | -8.2 | -7.2 | 1.4 | -0.8 | -2.9 | -2.5 | -1.2 | -0.8 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -1.4 | -0.3 | -1.9 | -1.2 | -1.6 | -0.7 | -1.0 | -0.3 | 1.2 | -3.5 | -1.5 | 0.9 | -0.2 | 0.3 | -1.5 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.1594 | 4.9702 | 4.5924 | 4.5728 | 4.8628 | 4.6259 | 4.1337 | 4.3702 | 4.0355 | 3.247 | 3.3607 | 3.7232 | 4.1644 | 4.065 | 3.616 | 3.873 | 2.7159 | 3.4863 |
Actin | 0.0218 | 0 | 0.0019 | 0.0218 | 0.0151 | 0.0004 | 0.0031 | 0 | 0.0001 | 0.0001 | 0.0007 | 0 | 0.0168 | 0 | 0.0074 | 0.0273 | 0.0128 | 0.0061 |
Bud | 0.0006 | 0 | 0.0002 | 0.0008 | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0.0003 | 0.0001 | 0 | 0.0015 | 0 | 0.0003 | 0.0006 | 0.0007 | 0.0003 |
Bud Neck | 0.0013 | 0.0002 | 0.002 | 0.0043 | 0.0018 | 0.001 | 0.0002 | 0 | 0 | 0.0008 | 0.0004 | 0.0009 | 0.0053 | 0.0002 | 0.0009 | 0.001 | 0.0012 | 0.0039 |
Bud Periphery | 0.0013 | 0 | 0.0004 | 0.0027 | 0.001 | 0.0003 | 0.0001 | 0 | 0 | 0.0006 | 0.0002 | 0.0001 | 0.0036 | 0.0001 | 0.0005 | 0.0011 | 0.001 | 0.0011 |
Bud Site | 0.0021 | 0.0001 | 0.0008 | 0.0019 | 0.0014 | 0.0001 | 0.0002 | 0 | 0 | 0.0004 | 0.0006 | 0.0001 | 0.0067 | 0.0002 | 0.0021 | 0.0031 | 0.0028 | 0.0002 |
Cell Periphery | 0.0003 | 0 | 0.0002 | 0.0007 | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0.0003 | 0 | 0 | 0.0008 | 0 | 0.0002 | 0.0003 | 0.0001 | 0.0002 |
Cytoplasm | 0.0029 | 0.0002 | 0.0013 | 0.0005 | 0.0137 | 0.001 | 0.0013 | 0.0001 | 0 | 0.01 | 0.0002 | 0.0001 | 0.0072 | 0.0002 | 0.0021 | 0.0068 | 0.0013 | 0.0011 |
Cytoplasmic Foci | 0.0095 | 0 | 0.0031 | 0.0011 | 0.005 | 0.0003 | 0.0061 | 0 | 0.0004 | 0.0004 | 0.0036 | 0 | 0.0088 | 0 | 0.0028 | 0.0094 | 0.0193 | 0.0002 |
Eisosomes | 0.0004 | 0 | 0 | 0.0015 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0.0003 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0029 | 0 | 0.0008 | 0.0032 | 0.0066 | 0.0011 | 0.0018 | 0 | 0 | 0.0007 | 0.0001 | 0 | 0.0036 | 0.0001 | 0.0012 | 0.0006 | 0.0009 | 0.0005 |
Endosome | 0.0103 | 0.0001 | 0.0042 | 0.0094 | 0.0202 | 0.0023 | 0.0059 | 0 | 0 | 0.0008 | 0.0031 | 0 | 0.0223 | 0.0001 | 0.0059 | 0.0119 | 0.016 | 0.0014 |
Golgi | 0.0033 | 0 | 0.0014 | 0.0051 | 0.0047 | 0.0001 | 0.0016 | 0 | 0.0001 | 0 | 0.0023 | 0 | 0.0055 | 0 | 0.0021 | 0.0074 | 0.0078 | 0.0006 |
Lipid Particles | 0.0097 | 0 | 0.0076 | 0.0027 | 0.0101 | 0.0003 | 0.0112 | 0 | 0.0004 | 0.0003 | 0.0281 | 0 | 0.0144 | 0 | 0.0096 | 0.0357 | 0.0167 | 0.0002 |
Mitochondria | 0.0082 | 0.0002 | 0.0057 | 0.0369 | 0.0292 | 0.0019 | 0.0028 | 0.0001 | 0.0002 | 0.0005 | 0.0028 | 0.0001 | 0.0145 | 0.0007 | 0.006 | 0.0057 | 0.0042 | 0.008 |
None | 0.0097 | 0 | 0.0013 | 0.0009 | 0.0046 | 0.0011 | 0.0027 | 0 | 0 | 0.0152 | 0.0003 | 0 | 0.0052 | 0.0105 | 0.0004 | 0.0357 | 0.0018 | 0.0003 |
Nuclear Periphery | 0.0201 | 0.0028 | 0.0111 | 0.0052 | 0.0492 | 0.0097 | 0.004 | 0.0025 | 0.0065 | 0.006 | 0.0024 | 0.0015 | 0.0453 | 0.006 | 0.0105 | 0.0027 | 0.0104 | 0.0063 |
Nucleolus | 0.0246 | 0.028 | 0.0252 | 0.0228 | 0.0903 | 0.0641 | 0.0138 | 0.0207 | 0.0167 | 0.06 | 0.0714 | 0.0519 | 0.0367 | 0.0274 | 0.0234 | 0.0165 | 0.0493 | 0.061 |
Nucleus | 0.838 | 0.964 | 0.9156 | 0.8678 | 0.7151 | 0.9042 | 0.9226 | 0.9743 | 0.9684 | 0.8737 | 0.8563 | 0.9402 | 0.7638 | 0.9524 | 0.9148 | 0.8083 | 0.7836 | 0.9038 |
Peroxisomes | 0.0069 | 0 | 0.0027 | 0.0015 | 0.0041 | 0.0001 | 0.0099 | 0 | 0.0059 | 0.0001 | 0.0088 | 0 | 0.0055 | 0 | 0.0022 | 0.0061 | 0.0149 | 0.0001 |
Punctate Nuclear | 0.0218 | 0.0041 | 0.0112 | 0.003 | 0.0191 | 0.0092 | 0.0112 | 0.0021 | 0.0009 | 0.0245 | 0.0179 | 0.0047 | 0.0122 | 0.0008 | 0.0062 | 0.0171 | 0.0536 | 0.0015 |
Vacuole | 0.0022 | 0.0002 | 0.0018 | 0.0035 | 0.0035 | 0.0017 | 0.0005 | 0.0001 | 0 | 0.0051 | 0.0004 | 0.0002 | 0.0142 | 0.0004 | 0.0008 | 0.0019 | 0.0008 | 0.0015 |
Vacuole Periphery | 0.002 | 0.0001 | 0.0014 | 0.003 | 0.0044 | 0.0008 | 0.0005 | 0.0001 | 0.0001 | 0.0004 | 0.0002 | 0 | 0.006 | 0.0007 | 0.0005 | 0.0006 | 0.0007 | 0.0015 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 28.4846 | 34.8448 | 30.4972 | 36.3212 | 33.692 | 37.9585 | 32.9731 | 22.5595 | 27.6892 | 38.9489 |
Translational Efficiency | 2.4934 | 1.3925 | 1.7069 | 1.4064 | 1.8597 | 1.6934 | 1.5871 | 2.0298 | 1.6773 | 1.565 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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