Standard name | |
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Human Ortholog | |
Description | ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
Bud Neck | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | – | 0 | – | – | – | 1 | 3 | 3 | – | – | – | 2 | 4 | 11 | 15 | 11 | 8 | 4 | 0 | 0 | 0 | 0 | 1 | 2 |
Endoplasmic Reticulum | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 1 | 0 | 0 | 6 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 5 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | – | 0 | – | – | – | 0 | 1 | 0 | – | – | – | 4 | 0 | 1 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleus | – | 19 | – | – | – | 12 | 10 | 19 | – | – | – | 12 | 87 | 67 | 100 | 138 | 74 | 27 | 37 | 53 | 31 | 49 | 77 | 54 |
Nuclear Periphery | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | – | 1 | – | – | – | 1 | 2 | 1 | – | – | – | 6 | 10 | 17 | 18 | 10 | 9 | 4 | 4 | 2 | 4 | 9 | 10 | 16 |
Peroxisomes | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | – | 0 | – | – | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | – | 1 | – | – | – | 3 | 5 | 3 | – | – | – | 0 | 7 | 5 | 10 | 50 | 34 | 6 | 5 | 5 | 2 | 5 | 17 | 20 |
Unique Cell Count | 21 | 16 | 19 | 24 | 18 | 105 | 96 | 136 | 216 | 130 | 43 | 49 | 62 | 40 | 72 | 109 | 104 | |||||||
Labelled Cell Count | 21 | 17 | 21 | 26 | 24 | 109 | 101 | 146 | 228 | 139 | 43 | 49 | 62 | 40 | 72 | 109 | 104 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | – | 48.4 | – | – | – | 26.3 | 22.7 | 25.6 | – | – | – | 18.9 | 46.1 | 44.6 | 43.1 | 33.6 | 47.5 | 49.4 | 29.6 | 37.4 | 38.3 |
Std Deviation (1e-4) | – | 10.8 | – | – | – | 7.6 | 10.3 | 8.0 | – | – | – | 5.8 | 11.5 | 14.4 | 14.7 | 12.4 | 16.9 | 16.7 | 11.0 | 11.7 | 12.7 |
Intensity Change (Log2) | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 9.9703 | 46.7869 | 41.0066 | 31.0258 | 40.3171 | 40.5695 | 29.7117 | 39.8633 | 32.5575 | 31.191 | 36.5898 | 29.4346 | 39.1109 | 42.9788 | 44.8748 | 44.8103 | 43.038 | 43.1741 |
Actin | 0.0013 | 0 | 0 | 0.0371 | 0 | 0 | 0.0009 | 0.0002 | 0.0008 | 0 | 0 | 0.0008 | 0.0647 | 0 | 0.0164 | 0 | 0 | 0.0082 |
Bud | 0.0008 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0.0024 | 0.0026 | 0.0001 | 0 | 0 | 0.0001 | 0.0008 | 0 | 0.0001 | 0 | 0 | 0.0003 |
Bud Neck | 0.0003 | 0 | 0 | 0.0003 | 0 | 0.0002 | 0.0007 | 0.0001 | 0.0001 | 0 | 0 | 0.0004 | 0.0004 | 0 | 0 | 0 | 0 | 0.0004 |
Bud Periphery | 0.0007 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0.0014 | 0.0004 | 0.0001 | 0 | 0 | 0.0001 | 0.0009 | 0 | 0 | 0 | 0 | 0.0003 |
Bud Site | 0.001 | 0 | 0 | 0.0005 | 0 | 0 | 0.0037 | 0.0003 | 0.0001 | 0 | 0 | 0.0001 | 0.0004 | 0 | 0.0001 | 0 | 0 | 0.0002 |
Cell Periphery | 0.0014 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0.0006 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0001 |
Cytoplasm | 0.0043 | 0.0001 | 0 | 0.0235 | 0.0001 | 0.0001 | 0.0038 | 0.1268 | 0.0005 | 0.0002 | 0 | 0.0002 | 0.0101 | 0.0001 | 0.0039 | 0.0001 | 0.0001 | 0.0221 |
Cytoplasmic Foci | 0.0014 | 0 | 0 | 0.0017 | 0 | 0 | 0.0012 | 0.0005 | 0.0001 | 0 | 0 | 0.0001 | 0.0027 | 0 | 0.0009 | 0 | 0 | 0.0053 |
Eisosomes | 0.0003 | 0 | 0 | 0.0003 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0004 | 0 | 0 | 0.0134 | 0 | 0 | 0.0012 | 0.0001 | 0.0002 | 0 | 0 | 0.0001 | 0.0178 | 0 | 0.0005 | 0 | 0 | 0.0018 |
Endosome | 0.0003 | 0 | 0 | 0.0129 | 0 | 0 | 0.0043 | 0.0001 | 0.0005 | 0 | 0 | 0.0002 | 0.0389 | 0 | 0.002 | 0 | 0 | 0.007 |
Golgi | 0.0001 | 0 | 0 | 0.0016 | 0 | 0 | 0.0003 | 0 | 0.0001 | 0 | 0 | 0.0003 | 0.0079 | 0 | 0.006 | 0 | 0 | 0.0029 |
Lipid Particles | 0.0011 | 0 | 0 | 0.0006 | 0 | 0 | 0.0006 | 0 | 0 | 0 | 0 | 0.0013 | 0.0013 | 0 | 0 | 0 | 0 | 0.0006 |
Mitochondria | 0.0119 | 0.0006 | 0.0004 | 0.005 | 0.0019 | 0.0011 | 0.0052 | 0.0015 | 0.0036 | 0.0003 | 0.0009 | 0.0014 | 0.0067 | 0.0005 | 0.0016 | 0.0004 | 0.0013 | 0.0014 |
None | 0.0019 | 0 | 0 | 0.0136 | 0 | 0 | 0.0019 | 0.0006 | 0.0001 | 0 | 0 | 0.0001 | 0.0028 | 0 | 0.0003 | 0 | 0 | 0.0034 |
Nuclear Periphery | 0.0315 | 0.0027 | 0.0008 | 0.0628 | 0.001 | 0.0008 | 0.0406 | 0.0022 | 0.0231 | 0.0016 | 0.0006 | 0.0437 | 0.0769 | 0.002 | 0.0042 | 0.0018 | 0.0029 | 0.0038 |
Nucleolus | 0.1806 | 0.014 | 0.0207 | 0.0113 | 0.1682 | 0.0584 | 0.0465 | 0.0049 | 0.0119 | 0.01 | 0.0409 | 0.0463 | 0.0044 | 0.007 | 0.0105 | 0.0028 | 0.0583 | 0.0392 |
Nucleus | 0.7391 | 0.9822 | 0.9779 | 0.8082 | 0.8282 | 0.9377 | 0.8656 | 0.8569 | 0.9563 | 0.9874 | 0.9571 | 0.8838 | 0.7542 | 0.9901 | 0.9525 | 0.9948 | 0.9367 | 0.8899 |
Peroxisomes | 0.0002 | 0 | 0 | 0.0004 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0.0006 | 0 | 0.0001 | 0 | 0 | 0.0005 |
Punctate Nuclear | 0.0068 | 0 | 0 | 0.0039 | 0.0001 | 0 | 0.0129 | 0.0004 | 0.0013 | 0.0004 | 0 | 0.0199 | 0.0045 | 0 | 0.0005 | 0 | 0.0001 | 0.0116 |
Vacuole | 0.0039 | 0.0001 | 0 | 0.0008 | 0.0001 | 0.0006 | 0.004 | 0.0015 | 0.0003 | 0 | 0.0001 | 0.0002 | 0.0013 | 0 | 0.0001 | 0 | 0.0001 | 0.0004 |
Vacuole Periphery | 0.0106 | 0.0002 | 0.0001 | 0.0019 | 0.0003 | 0.0008 | 0.002 | 0.0009 | 0.0007 | 0.0001 | 0.0002 | 0.0007 | 0.0024 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0005 |
R1 | R2 | |||||||||
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G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 137.1397 | 106.0846 | 142.3204 | 152.7919 | 122.784 | 114.678 | 147.3965 | 178.8292 | 193.4518 | 141.4752 |
Translational Efficiency | 1.9859 | 2.3874 | 1.8872 | 1.9939 | 1.8761 | 2.6348 | 1.9226 | 1.5471 | 1.5045 | 1.7301 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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