Standard name | |
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Human Ortholog | |
Description | O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-glucan; mediates mitochondrial translocation of Apn1p; expression regulated by the cell integrity pathway and by Swi5p during the cell cycle; PIR1 has a paralog, YJL160C, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 1 | 3 | 0 | 0 | 2 | 4 | 3 | 7 | 9 | 11 | 10 | 0 | 1 | 2 | 2 | 1 | 1 | 5 | 8 | 6 | 9 | 14 | 26 |
Bud | 1 | 1 | 2 | 2 | 1 | 9 | 21 | 19 | 12 | 18 | 21 | 18 | 0 | 1 | 2 | 4 | 7 | 4 | 18 | 31 | 10 | 17 | 33 | 19 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 9 | 4 | 8 | 13 | 19 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 3 | 2 | 6 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 2 | 8 | 3 | 3 | 6 | 6 | 4 | 3 | 4 | 4 | 6 | 1 | 3 | 2 | 60 | 37 | 43 | 0 | 1 | 1 | 0 | 3 | 3 |
Cytoplasm | 118 | 237 | 155 | 122 | 179 | 207 | 236 | 260 | 204 | 235 | 182 | 161 | 184 | 383 | 425 | 299 | 196 | 213 | 69 | 159 | 115 | 191 | 327 | 262 |
Endoplasmic Reticulum | 30 | 27 | 15 | 5 | 3 | 2 | 1 | 1 | 2 | 5 | 6 | 8 | 23 | 3 | 12 | 16 | 4 | 7 | 52 | 40 | 28 | 19 | 9 | 10 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 3 | 2 | 1 | 1 | 0 | 3 | 1 | 1 | 0 | 0 | 1 | 5 | 4 | 3 | 12 | 28 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 3 | 2 | 0 | 0 | 0 | 2 | 3 |
Mitochondria | 3 | 1 | 0 | 0 | 0 | 1 | 3 | 5 | 5 | 7 | 15 | 10 | 1 | 0 | 0 | 1 | 2 | 2 | 2 | 2 | 1 | 1 | 3 | 12 |
Nucleus | 0 | 1 | 1 | 2 | 1 | 1 | 4 | 4 | 3 | 6 | 2 | 4 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 |
Nuclear Periphery | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 2 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 3 | 10 |
Vac/Vac Membrane | 2 | 9 | 3 | 4 | 6 | 18 | 21 | 38 | 25 | 44 | 25 | 27 | 8 | 16 | 2 | 6 | 11 | 3 | 10 | 12 | 12 | 8 | 18 | 20 |
Unique Cell Count | 153 | 270 | 178 | 131 | 187 | 229 | 262 | 308 | 243 | 293 | 233 | 210 | 212 | 407 | 443 | 317 | 210 | 229 | 170 | 280 | 191 | 265 | 457 | 426 |
Labelled Cell Count | 156 | 280 | 187 | 138 | 193 | 246 | 300 | 345 | 268 | 333 | 276 | 249 | 220 | 414 | 449 | 391 | 260 | 277 | 170 | 280 | 191 | 265 | 457 | 426 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.3 | 13.6 | 9.1 | 8.8 | 9.6 | 7.8 | 6.9 | 7.1 | 6.6 | 6.3 | 6.0 | 6.7 | 13.0 | 10.4 | 9.1 | 23.6 | 24.9 | 27.7 | 10.6 | 9.6 | 8.8 |
Std Deviation (1e-4) | 4.0 | 7.2 | 3.1 | 3.7 | 3.4 | 2.1 | 2.3 | 1.9 | 2.0 | 2.1 | 2.2 | 2.5 | 7.7 | 4.6 | 3.7 | 15.1 | 16.9 | 20.7 | 3.2 | 2.7 | 2.3 |
Intensity Change (Log2) | – | – | – | -0.04 | 0.08 | -0.21 | -0.39 | -0.35 | -0.46 | -0.51 | -0.59 | -0.43 | 0.52 | 0.19 | 0.0 | 1.38 | 1.45 | 1.61 | 0.22 | 0.09 | -0.05 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.7 | 1.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 3.2 | 2.6 | 2.2 | 2.6 | 3.4 | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | -1.6 | -1.0 | -1.3 | 0 | 0 | 0 | -1.7 | -0.9 | 0 | 0 | 0 | 4.5 | 4.0 | 4.3 |
Cytoplasm | 1.7 | 3.0 | 1.1 | 1.0 | -0.8 | -0.9 | -1.9 | -2.3 | -2.6 | -0.1 | 2.9 | 4.0 | 2.8 | 2.1 | 2.0 |
Endoplasmic Reticulum | -1.6 | -3.0 | -3.8 | -4.4 | -4.8 | -3.9 | -3.5 | -2.7 | -1.9 | 0.8 | -5.0 | -3.2 | -1.5 | -3.0 | -2.4 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 2.8 | 2.9 | 4.1 | 3.5 | 4.7 | 3.6 | 4.1 | 1.2 | 1.4 | 0 | 0 | 1.9 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 10.2065 | 9.91 | 6.2144 | 4.8737 | 4.7575 | 9.7417 | 9.6111 | 8.944 | 7.1441 | 5.4848 | 4.2277 | 10.3868 | 13.6131 | 13.1957 | 9.5827 | 6.137 | 5.7417 | 12.8705 |
Actin | 0.0188 | 0.0056 | 0.0108 | 0.0046 | 0.0055 | 0.0047 | 0.0339 | 0.0039 | 0.0132 | 0.0018 | 0.0032 | 0.008 | 0.0184 | 0.0054 | 0.0215 | 0.0059 | 0.0524 | 0.0024 |
Bud | 0.0017 | 0.0086 | 0.0079 | 0.0222 | 0.0046 | 0.0038 | 0.0014 | 0.0015 | 0.0055 | 0.0221 | 0.0053 | 0.0019 | 0.0011 | 0.0033 | 0.0043 | 0.0072 | 0.023 | 0.0012 |
Bud Neck | 0.0014 | 0.0011 | 0.0016 | 0.0017 | 0.0021 | 0.0051 | 0.014 | 0.0006 | 0.0016 | 0.0006 | 0.0006 | 0.0039 | 0.0011 | 0.0008 | 0.0042 | 0.0008 | 0.0027 | 0.0036 |
Bud Periphery | 0.0025 | 0.0051 | 0.0086 | 0.0162 | 0.0014 | 0.0007 | 0.001 | 0.0007 | 0.0036 | 0.0238 | 0.008 | 0.0017 | 0.0022 | 0.0025 | 0.0034 | 0.0112 | 0.0203 | 0.0012 |
Bud Site | 0.0028 | 0.0149 | 0.0084 | 0.0019 | 0.0023 | 0.0004 | 0.004 | 0.0051 | 0.0071 | 0.001 | 0.0011 | 0.0003 | 0.0017 | 0.0087 | 0.0031 | 0.0024 | 0.0041 | 0.0002 |
Cell Periphery | 0.0004 | 0.0006 | 0.0005 | 0.0002 | 0.0002 | 0.0002 | 0.0004 | 0.0002 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0.0005 | 0.0013 | 0.0003 | 0.0005 | 0.0005 | 0.0001 |
Cytoplasm | 0.6822 | 0.8237 | 0.7574 | 0.797 | 0.7335 | 0.7529 | 0.7449 | 0.8724 | 0.7988 | 0.8152 | 0.6563 | 0.7376 | 0.7585 | 0.8728 | 0.85 | 0.8109 | 0.7058 | 0.8369 |
Cytoplasmic Foci | 0.0262 | 0.0073 | 0.0198 | 0.0299 | 0.0441 | 0.023 | 0.0148 | 0.0068 | 0.0109 | 0.0067 | 0.0295 | 0.0077 | 0.0102 | 0.0045 | 0.0172 | 0.0099 | 0.0146 | 0.0051 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0002 | 0 | 0.0003 | 0 |
Endoplasmic Reticulum | 0.0871 | 0.0375 | 0.0151 | 0.0173 | 0.0176 | 0.1142 | 0.0559 | 0.048 | 0.0293 | 0.0046 | 0.0028 | 0.1429 | 0.0846 | 0.0496 | 0.0117 | 0.0165 | 0.0201 | 0.0928 |
Endosome | 0.0249 | 0.0048 | 0.0197 | 0.0194 | 0.0255 | 0.0088 | 0.025 | 0.0034 | 0.0095 | 0.0043 | 0.008 | 0.01 | 0.0231 | 0.0029 | 0.0212 | 0.0096 | 0.0139 | 0.0066 |
Golgi | 0.005 | 0.0006 | 0.0018 | 0.001 | 0.0064 | 0.0008 | 0.0059 | 0.0004 | 0.0028 | 0.0002 | 0.002 | 0.0012 | 0.0053 | 0.0004 | 0.004 | 0.0005 | 0.0122 | 0.0007 |
Lipid Particles | 0.008 | 0.0012 | 0.0021 | 0.0008 | 0.0015 | 0.0006 | 0.0061 | 0.0003 | 0.0051 | 0 | 0.0073 | 0.0042 | 0.0069 | 0.0012 | 0.0033 | 0.0002 | 0.0115 | 0.0001 |
Mitochondria | 0.0064 | 0.0009 | 0.0014 | 0.0012 | 0.0022 | 0.0006 | 0.0021 | 0.0003 | 0.0019 | 0.0012 | 0.0017 | 0.005 | 0.0116 | 0.0018 | 0.0094 | 0.0013 | 0.0042 | 0.0008 |
None | 0.032 | 0.0197 | 0.0779 | 0.0317 | 0.0906 | 0.0102 | 0.0115 | 0.0337 | 0.0682 | 0.1016 | 0.1927 | 0.007 | 0.0065 | 0.0141 | 0.0049 | 0.0781 | 0.0569 | 0.0027 |
Nuclear Periphery | 0.0342 | 0.0243 | 0.0158 | 0.0137 | 0.0204 | 0.032 | 0.0295 | 0.0085 | 0.0142 | 0.0029 | 0.0025 | 0.027 | 0.0319 | 0.0095 | 0.0111 | 0.0123 | 0.0086 | 0.019 |
Nucleolus | 0.0022 | 0.0004 | 0.0006 | 0.0003 | 0.0008 | 0.0003 | 0.0006 | 0.0001 | 0.0007 | 0.0001 | 0.0002 | 0.0003 | 0.0003 | 0.0003 | 0.0002 | 0.0003 | 0.0003 | 0 |
Nucleus | 0.0387 | 0.0299 | 0.0305 | 0.0221 | 0.0168 | 0.0292 | 0.0324 | 0.0095 | 0.0142 | 0.0085 | 0.006 | 0.0309 | 0.0197 | 0.0131 | 0.0197 | 0.0213 | 0.0124 | 0.0226 |
Peroxisomes | 0.0095 | 0.0006 | 0.001 | 0.0015 | 0.0044 | 0.0005 | 0.0038 | 0.0004 | 0.003 | 0.0006 | 0.0641 | 0.0044 | 0.0021 | 0.0002 | 0.0029 | 0.0003 | 0.0272 | 0.0001 |
Punctate Nuclear | 0.0088 | 0.005 | 0.0117 | 0.0103 | 0.0151 | 0.0073 | 0.0078 | 0.0015 | 0.0054 | 0.0009 | 0.0035 | 0.0023 | 0.0035 | 0.0015 | 0.003 | 0.0029 | 0.003 | 0.0013 |
Vacuole | 0.0057 | 0.0074 | 0.0059 | 0.0057 | 0.0045 | 0.0039 | 0.0036 | 0.0026 | 0.0037 | 0.0031 | 0.004 | 0.0023 | 0.0086 | 0.0056 | 0.0033 | 0.0068 | 0.005 | 0.0019 |
Vacuole Periphery | 0.0014 | 0.0008 | 0.0013 | 0.0011 | 0.0008 | 0.0007 | 0.0011 | 0.0002 | 0.0009 | 0.0006 | 0.001 | 0.0011 | 0.0021 | 0.0006 | 0.0011 | 0.0012 | 0.001 | 0.0006 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 39.2537 | 32.6869 | 289.6346 | 999.0893 | 367.4135 | 19.3473 | 25.7593 | 63.6387 | 689.2058 | 550.8899 |
Translational Efficiency | 0.9827 | 1.2488 | 1.9546 | 1.4686 | 2.3735 | 1.1958 | 2.1848 | 1.6336 | 2.3117 | 2.5243 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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