Standard name
Human Ortholog
Description Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0 0 0.06 0 0 0 – 0 0 0 0 0.09 0.12 0.06 0.06 0 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07
Golgi 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0.2 0.08 0.22 0.53 0.47 0.52 – 0.48 0.61 0.56 0 0 0 0 0.12 0 0 0 0 0 0.07 0.12
Nucleus 0.07 0 0.05 0.12 0.1 0.13 0.09 0.12 – 0.09 0.07 0.14 0.07 0.05 0 0.06 0 0 0 0 0 0 0 0
Nuclear Periphery 0.86 0.8 0.87 0.78 0.58 0.54 0.52 0.44 – 0.48 0.52 0.48 0.81 0.79 0.74 0.61 0.74 0.8 0.9 0.86 0.92 0.86 0.78 0.65
Nucleolus 0.17 0 0.07 0 0.07 0.1 0.12 0.16 – 0.18 0.2 0.15 0 0.06 0.07 0.09 0.12 0.12 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0.06 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0.31 0.11 0.22 0.22 0.08 0.07 0.07 – 0.11 0.07 0.05 0.25 0.17 0.16 0.37 0.29 0.36 0 0.06 0 0 0.06 0.06
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1
Bud 1 0 0 1 1 1 1 3 – 3 1 3 0 0 0 0 0 0 3 0 0 1 0 3
Bud Neck 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 1 6 1 6 – 10 2 11 0 3 1 0 0 0 – – – – – –
Cell Periphery 0 2 0 0 0 1 0 0 – 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0
Cytoplasm 5 6 3 1 12 5 10 18 – 12 10 8 5 22 25 8 9 1 0 0 0 0 1 0
Endoplasmic Reticulum 0 3 0 0 0 1 0 0 – 0 2 0 2 2 3 3 1 1 0 0 0 1 1 2
Endosome 0 0 3 0 5 2 6 3 – 10 2 4 1 2 3 2 2 1 2 3 2 1 6 13
Golgi 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0 1 0 0 0 0 0 0 1 3
Mitochondria 4 4 51 14 45 163 207 232 – 216 283 288 1 2 1 3 19 6 0 6 6 4 15 24
Nucleus 10 10 13 22 21 39 41 53 – 42 34 73 14 13 6 8 2 3 2 3 1 1 1 1
Nuclear Periphery 124 197 216 137 120 166 231 196 – 219 242 243 171 201 160 78 119 109 154 241 225 150 167 136
Nucleolus 25 9 18 7 15 31 54 69 – 82 93 79 6 16 16 11 20 17 4 6 2 2 2 2
Peroxisomes 0 0 0 0 0 1 1 0 – 1 0 2 0 1 1 1 0 0 0 0 0 0 0 3
SpindlePole 0 0 0 0 1 1 4 3 – 2 1 1 1 4 13 1 0 0 0 0 1 0 0 2
Vac/Vac Membrane 4 76 28 39 46 25 31 29 – 50 34 25 53 43 35 47 46 49 2 16 3 6 13 12
Unique Cell Count 144 245 249 176 208 307 444 444 452 465 511 211 254 217 127 161 137 172 282 246 174 215 210
Labelled Cell Count 173 307 332 221 267 442 587 612 648 704 737 254 310 265 163 218 187 172 282 246 174 215 210


Nuclear Periphery

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 10.2 15.5 8.8 9.5 8.0 6.1 5.9 5.9 – 5.9 5.6 5.7 12.4 11.2 11.5 14.3 13.6 15.9 13.4 14.0 13.8
Std Deviation (1e-4) 2.1 4.6 2.0 2.0 5.1 1.6 1.5 1.5 – 2.2 1.6 1.5 2.8 3.2 3.8 4.6 4.2 3.4 3.2 3.1 3.6
Intensity Change (Log2) – – – 0.11 -0.13 -0.54 -0.59 -0.57 – -0.57 -0.66 -0.62 0.5 0.35 0.39 0.71 0.63 0.86 0.61 0.67 0.66


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Cytoplasm 0 2.7 0 0 2.1 – 1.3 0 0 0 3.8 4.7 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
Mitochondria -3.5 0.3 7.9 6.8 8.2 – 7.1 10.3 9.3 -6.8 -7.2 -6.8 -4.7 -2.3 -4.3
Nucleus 2.7 2.0 3.0 1.9 2.9 – 1.9 1.1 3.7 0.6 -0.1 -1.3 0.4 -2.1 -1.4
Nuclear Periphery -2.4 -7.0 -8.3 -9.2 -11.0 – -10.0 -9.2 -10.4 -1.7 -2.3 -3.5 -5.6 -3.3 -1.9
Nucleolus -1.4 0 1.2 2.0 3.2 – 4.0 4.5 3.2 -2.1 -0.4 0.1 0.5 1.8 1.7
Peroxisomes 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 – 0 0 0 0 0 3.9 0 0 0
Vacuole 3.0 3.1 -1.2 -1.9 -2.2 – -0.1 -1.8 -3.2 3.9 1.8 1.5 5.9 4.5 5.8

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 9.1986 8.1678 8.0352 7.6307 7.6385 7.6181 11.4477 10.7588 10.3147 9.9722 9.1617 10.2443 9.4048 7.5665 7.8736 7.1722 7.2488 7.3456
Actin 0.0058 0.0001 0.0001 0.0004 0.0002 0 0.0123 0 0.0018 0.0258 0.0002 0.0017 0.0004 0.0001 0.0001 0.0003 0.0003 0
Bud 0 0 0 0 0 0 0.0001 0 0.0001 0.0001 0 0 0 0 0 0 0 0
Bud Neck 0.0001 0 0.0001 0 0 0 0.0004 0 0.0005 0 0 0 0 0 0 0 0.0002 0
Bud Periphery 0.0001 0 0.0002 0.0001 0.0001 0 0.0003 0 0.0002 0.0001 0 0 0.0001 0 0 0.0001 0.0002 0
Bud Site 0.0001 0 0.0001 0 0 0 0.004 0 0.0017 0.0003 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0.0001 0 0 0.0001 0 0.0001 0 0 0 0 0 0 0 0 0
Cytoplasm 0.0042 0.0001 0.0001 0.0001 0 0 0.0015 0 0.0007 0.0002 0 0.0001 0.0001 0.0004 0.0001 0 0.0001 0
Cytoplasmic Foci 0.0009 0 0 0.0002 0.0001 0 0.0032 0 0.0015 0.008 0.0009 0.0003 0.0018 0 0 0.0001 0.0002 0
Eisosomes 0 0 0 0 0 0 0.0002 0 0.0002 0 0 0 0 0 0 0 0 0
Endoplasmic Reticulum 0.0007 0.0004 0.0006 0.0016 0.0003 0.0002 0.0035 0.0004 0.0008 0.0005 0.0006 0.0004 0.0004 0.0005 0.0005 0.0011 0.0007 0.0001
Endosome 0.0005 0.0002 0.0003 0.0009 0.0006 0.0001 0.0116 0.0001 0.0016 0.0018 0.0016 0.0006 0.0003 0.0002 0.0002 0.0004 0.001 0.0001
Golgi 0.0002 0 0 0.0006 0.0004 0 0.0031 0 0.0006 0.0042 0.0012 0.0004 0.0002 0.0001 0 0.0003 0.0009 0
Lipid Particles 0.0011 0.0002 0.0004 0.0103 0.0047 0.0004 0.0152 0.0007 0.0033 0.0035 0.0279 0.0006 0.0015 0.001 0.0003 0.0023 0.0137 0.0004
Mitochondria 0.0006 0.0002 0.0007 0.0016 0.0007 0.0003 0.0022 0.0002 0.0021 0.001 0.001 0.0002 0.0011 0.0002 0.0006 0.0014 0.0013 0.0001
None 0.0005 0 0.0003 0.0001 0.0001 0 0.0011 0 0.0072 0.0003 0.0002 0 0.0003 0.0001 0.0001 0.0001 0.0002 0
Nuclear Periphery 0.9359 0.8921 0.9217 0.9343 0.9463 0.9713 0.9007 0.9646 0.9305 0.905 0.9282 0.9827 0.9464 0.9188 0.9414 0.9224 0.9202 0.9799
Nucleolus 0.0003 0.0029 0.0022 0.002 0.0018 0.0021 0.0004 0.0001 0.0012 0.0003 0.0007 0.0001 0.0004 0.0011 0.0003 0.0006 0.0033 0.0002
Nucleus 0.0201 0.0729 0.0437 0.0183 0.0186 0.0109 0.0053 0.0023 0.0041 0.0019 0.0016 0.0006 0.0146 0.0526 0.0203 0.0367 0.0264 0.0074
Peroxisomes 0.0013 0 0 0.0001 0.0001 0 0.0014 0 0.0006 0.0128 0.0001 0.0001 0.0011 0 0 0.0001 0.0002 0
Punctate Nuclear 0.0006 0.0039 0.0005 0.0011 0.0018 0.0005 0.003 0.0003 0.001 0.0009 0.0013 0.0004 0.0014 0.0006 0.0003 0.001 0.0018 0.0003
Vacuole 0.0004 0.0011 0.0018 0.001 0.0004 0.0002 0.0012 0.0002 0.0011 0.0003 0.0007 0 0.0003 0.0006 0.0003 0.0005 0.0015 0.0001
Vacuole Periphery 0.0267 0.0257 0.0271 0.0271 0.0239 0.0139 0.0293 0.031 0.039 0.0328 0.0336 0.0117 0.0296 0.0237 0.0355 0.0327 0.0277 0.0114

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 44.1362 36.1671 30.0906 35.6321 31.7914 25.7319 34.9063 34.4042 31.8182 35.6538
Translational Efficiency 0.9538 0.9171 1.1754 0.8266 1.2198 1.4705 0.8165 1.0302 1.0215 1.1833

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1740 2340 1840 1443 2348 1520 2179 1439 4088 3860 4019 2882

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1094.24 1247.91 1354.74 1303.95 1142.48 1122.05 1415.84 1414.30 1121.95 1198.35 1387.87 1359.05
Standard Deviation 195.43 239.26 213.71 230.71 196.61 208.99 212.75 231.54 197.55 235.98 215.35 237.62
Intensity Change Log 2 — 0.189585 0.308087 0.252959 — -0.026032 0.309489 0.307919 — 0.083478 0.308803 0.281293

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000360 0.000345 0.000319 0.000561 0.000448 0.000418 0.000246 0.000256 0.000410 0.000374 0.000280 0.000409
Bud Neck 0.000298 0.000249 0.000727 0.004221 0.000460 0.000308 0.000300 0.000940 0.000391 0.000272 0.000495 0.002583
Bud Site 0.000090 0.000062 0.000044 0.001307 0.000130 0.000079 0.000074 0.000198 0.000113 0.000069 0.000060 0.000753
Cell Periphery 0.000040 0.000031 0.000018 0.000098 0.000047 0.000043 0.000012 0.000039 0.000044 0.000036 0.000015 0.000069
Cytoplasm 0.000182 0.000236 0.000151 0.002963 0.000273 0.000896 0.000066 0.000687 0.000234 0.000496 0.000104 0.001826
Cytoplasmic Foci 0.000399 0.000409 0.000108 0.003735 0.000366 0.000720 0.000088 0.001769 0.000380 0.000531 0.000097 0.002753
Eisosomes 0.000006 0.000006 0.000003 0.000012 0.000009 0.000006 0.000002 0.000004 0.000008 0.000006 0.000003 0.000008
Endoplasmic Reticulum 0.004344 0.001844 0.001038 0.002352 0.003500 0.004287 0.000566 0.002066 0.003859 0.002806 0.000782 0.002209
Endosome 0.000665 0.000588 0.000186 0.004280 0.000887 0.000969 0.000070 0.001505 0.000792 0.000738 0.000123 0.002894
Golgi 0.000197 0.000277 0.000099 0.002111 0.000280 0.000392 0.000066 0.001855 0.000245 0.000322 0.000081 0.001983
Lipid Particles 0.002524 0.000907 0.000111 0.004076 0.002966 0.002628 0.000097 0.005071 0.002778 0.001585 0.000104 0.004573
Mitochondria 0.004244 0.002504 0.001629 0.004606 0.005399 0.005794 0.001411 0.005119 0.004907 0.003800 0.001510 0.004862
Mitotic Spindle 0.000528 0.000741 0.003654 0.077021 0.001411 0.003902 0.000998 0.009766 0.001035 0.001986 0.002214 0.043440
None 0.000653 0.000491 0.000244 0.001701 0.001022 0.000726 0.000111 0.000275 0.000865 0.000584 0.000172 0.000989
Nuclear Periphery 0.671381* 0.733418* 0.744451* 0.523634* 0.660576* 0.678603* 0.794375* 0.657288* 0.665175* 0.711833* 0.771519* 0.590369*
Nuclear Periphery Foci 0.261166* 0.225147* 0.189968 0.285395* 0.266298* 0.248650* 0.173241 0.280337* 0.264114* 0.234402* 0.180899 0.282869*
Nucleolus 0.020327 0.010623 0.025735 0.026050 0.020892 0.018249 0.011952 0.004141 0.020651 0.013626 0.018262 0.015111
Nucleus 0.015709 0.009838 0.025729 0.031445 0.019393 0.020974 0.007946 0.003967 0.017825 0.014223 0.016088 0.017725
Peroxisomes 0.000527 0.000395 0.000405 0.000700 0.000536 0.000533 0.000238 0.000387 0.000532 0.000449 0.000314 0.000544
Vacuole 0.003856 0.002252 0.000772 0.010571 0.004270 0.003595 0.000933 0.006439 0.004094 0.002781 0.000859 0.008508
Vacuole Periphery 0.012505 0.009638 0.004610 0.013162 0.010836 0.008226 0.007208 0.017891 0.011546 0.009082 0.006019 0.015523

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 0.32 0.88 -4.30 -4.35 -4.92 0.54 2.88 2.98 2.40 -0.21 1.01 3.04 -1.08 -1.82 -3.38
Bud Neck 0.98 -5.15 -10.57 -10.68 -9.21 1.71 1.72 -3.74 -6.17 -6.14 2.12 -2.18 -10.95 -11.67 -10.34
Bud Site 0.55 1.00 -5.27 -5.38 -5.45 0.78 0.67 -0.94 -1.98 -1.63 1.01 1.00 -5.27 -5.67 -5.64
Cell Periphery 1.03 2.82 -5.54 -6.85 -8.50 0.54 5.64 1.15 0.41 -5.45 1.42 6.03 -4.12 -5.51 -10.02
Cytoplasm -0.53 0.31 -4.23 -4.13 -4.27 -1.15 2.53 -1.07 -0.05 -1.40 -1.18 2.20 -3.90 -3.05 -4.17
Cytoplasmic Foci -0.08 3.57 -4.63 -4.55 -5.05 -2.29 5.05 -3.59 -2.59 -4.33 -1.32 6.04 -5.79 -5.30 -6.50
Eisosomes 0.63 3.91 -3.46 -3.83 -5.22 2.90 8.98 4.93 2.28 -3.61 2.86 9.48 -0.81 -2.65 -6.12
Endoplasmic Reticulum 5.99 8.69 4.22 -2.52 -6.95 -1.82 10.99 3.69 4.95 -5.35 3.73 13.79 5.53 1.99 -8.58
Endosome 0.35 4.21 -6.19 -6.20 -7.09 -0.39 6.69 -2.01 -1.75 -5.08 0.40 7.85 -6.35 -6.38 -8.58
Golgi -0.50 1.77 -5.01 -4.49 -5.31 -0.58 1.64 -2.24 -2.10 -2.60 -0.57 2.07 -4.36 -4.12 -4.88
Lipid Particles 3.24 5.06 -1.36 -2.99 -3.77 0.41 4.70 -1.86 -2.20 -5.20 2.53 6.60 -2.21 -3.99 -6.29
Mitochondria 2.60 3.83 -0.78 -3.94 -5.30 -0.36 5.80 0.22 0.49 -3.96 1.85 6.95 -0.13 -1.81 -6.19
Mitotic Spindle -0.78 -4.77 -14.96 -14.91 -14.20 -1.94 1.02 -4.84 -2.93 -5.13 -1.72 -3.23 -15.28 -14.80 -14.76
None 1.08 2.75 -2.52 -2.86 -3.38 1.10 4.07 3.30 2.73 -3.82 1.74 4.79 -0.69 -1.91 -3.75
Nuclear Periphery -9.35 -9.53 16.53 24.72* 24.13 -2.37 -22.93 0.54 2.60 19.66 -9.59 -22.63 12.98 20.63 30.80
Nuclear Periphery Foci 6.80 13.19 -2.60 -8.17 -13.27 2.97 19.86* -2.19 -4.62 -18.69* 7.67 23.45 -3.33 -9.72 -22.40
Nucleolus 5.01 -2.52 -2.98 -6.97 -0.81 1.17 4.93 10.42 7.22 5.69 4.97 1.24 2.25 -1.96 1.15
Nucleus 2.87 -4.04 -6.33 -8.52 -2.75 -0.57 5.86 8.04 6.83 3.08 2.14 0.62 -1.48 -3.29 -2.01
Peroxisomes 2.68 2.51 -1.75 -2.61 -2.54 0.06 7.85 0.38 0.37 -0.75 2.18 7.24 -0.55 -1.08 -1.98
Vacuole 3.29 7.18 -6.00 -7.42 -8.70 0.83 7.43 -2.48 -2.78 -7.09 2.99 10.23 -6.30 -7.91 -11.09
Vacuole Periphery 2.36 7.05 -0.31 -2.28 -5.97 2.25 3.78 -4.50 -5.90 -7.11 3.05 7.64 -3.42 -5.82 -9.11
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication
Localization
Cell Percentages nuclear periphery (98%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Pom34

Pom34


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Pom34-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available