Standard name
Human Ortholog
Description Cell wall protein of unknown function; localizes to the cytoplasm; deletion improves xylose fermentation in industrially engineered strains; YLR042C is not an essential gene
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.97 0.84 0.87 0.82 0.88 0.74 – 0.66 0.57 0.62 0.57 0.55 0.96 0.98 0.98 0.94 0.93 0.95 0.73 0.34 0.39 0.14 0.2 0.29
Endoplasmic Reticulum 0 0.09 0.05 0 0 0 – 0 0 0 0 0 0 0 0 0.05 0.07 0.09 0.05 0.31 0.2 0.57 0.55 0.4
Endosome 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0.13 0.32 0.1 0.45 – 0.47 0.62 0.58 0.64 0.6 0 0 0 0 0 0.05 0.06 0.13 0.22 0.1 0.05 0.05
Nucleus 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0.08 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0.07 0.07 0.07 0.08 0.07 0.12
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 2 1 1 0 1 0 – 0 0 0 0 0 0 0 0 0 0 0 14 7 5 1 7 6
Bud 1 1 2 3 11 12 – 16 4 8 5 10 0 0 0 0 0 1 12 5 6 5 9 10
Bud Neck 3 0 0 0 0 0 – 4 1 1 1 1 0 0 0 0 0 0 11 4 1 1 3 2
Bud Site 0 0 0 0 1 2 – 1 0 3 1 4 0 0 0 0 0 0 – – – – – –
Cell Periphery 2 1 1 4 3 0 – 1 0 0 1 1 3 3 4 2 0 3 8 2 2 1 2 3
Cytoplasm 704 163 192 155 258 263 – 317 102 144 138 151 247 245 274 162 186 193 556 75 89 23 51 75
Endoplasmic Reticulum 17 18 10 1 3 2 – 0 0 1 0 0 4 3 1 9 13 18 39 67 45 94 138 102
Endosome 1 1 0 0 5 0 – 2 0 0 0 0 2 0 1 2 0 2 7 3 4 1 2 4
Golgi 0 3 1 1 0 0 – 0 0 0 0 0 1 0 0 1 2 1 0 3 1 1 0 1
Mitochondria 15 5 29 60 29 158 – 225 111 135 155 165 1 2 0 7 7 11 43 29 51 17 12 14
Nucleus 0 1 1 1 1 0 – 5 2 3 4 1 0 0 0 0 1 2 0 0 0 1 0 1
Nuclear Periphery 1 0 0 2 0 0 – 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 1 0 0 1 – 1 1 3 3 2 1 0 0 0 0 1 0 0 0 0 0 1
Peroxisomes 0 0 0 0 0 0 – 2 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0
SpindlePole 0 0 1 1 2 0 – 10 2 5 7 12 0 0 0 2 0 0 7 1 2 1 0 0
Vac/Vac Membrane 0 15 1 2 5 5 – 4 2 3 4 1 0 0 0 5 8 7 51 15 15 12 17 30
Unique Cell Count 729 193 220 188 293 355 481 178 234 244 275 256 249 279 173 200 203 768 221 231 165 251 258
Labelled Cell Count 746 209 240 230 319 443 589 226 306 319 348 261 253 283 191 217 239 768 221 231 165 251 258


Endoplasmic Reticulum

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 4.0 5.7 3.7 3.5 4.0 3.2 – 3.2 3.0 3.1 2.8 2.7 5.1 4.8 4.6 5.8 5.8 5.9 6.8 7.2 7.4
Std Deviation (1e-4) 0.6 1.4 1.0 1.5 1.4 1.4 – 1.3 1.9 1.6 1.6 1.2 1.2 1.1 0.9 2.0 4.5 2.4 1.5 1.6 1.7
Intensity Change (Log2) – – – -0.08 0.12 -0.21 – -0.2 -0.33 -0.26 -0.39 -0.44 0.45 0.37 0.31 0.64 0.65 0.67 0.87 0.96 1.0

WT3RAP60RAP140RAP220RAP380RAP460RAP540RAP620RAP7000510WT3HU80HU120HU1600510WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30510WT1AF100AF140AF1800510
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -1.4 0.3 -3.8 – -5.9 -6.8 -6.2 -7.3 -7.8 3.7 4.8 4.9 2.1 2.0 2.8
Endoplasmic Reticulum 0 0 0 – 0 0 0 0 0 -1.9 0 0 0.3 0.9 1.8
Endosome 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 – 0 0 0 0 0 -5.7 0 0 -3.1 -3.5 -2.7
Nucleus 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 0.6656 1.4276 1.1878 1.1737 0.341 0.8935 1.1871 1.5552 1.1709 0.9556 0.3928 1.2181 1.0123 1.7534 1.4129 2.155 1.2714 1.2864
Actin 0.0151 0.0006 0.0101 0.008 0.002 0.0003 0.0312 0.0022 0.0251 0.0257 0.0013 0.004 0.0003 0.0002 0.0012 0.0198 0.0004 0.0005
Bud 0.0004 0.0001 0.0002 0.0011 0.0001 0 0.001 0.0048 0.0085 0.0034 0.0002 0.0043 0.0025 0.0001 0.0033 0.0001 0.0001 0.0007
Bud Neck 0.0006 0.0004 0.0005 0.0046 0.0004 0.0009 0.0032 0.0012 0.0022 0.0116 0.0004 0.0054 0.0001 0.0002 0.0009 0.0004 0.0002 0.0027
Bud Periphery 0.0017 0.0002 0.0005 0.0042 0.0001 0.0001 0.0017 0.0027 0.0055 0.0018 0.0002 0.0051 0.0008 0.0001 0.0011 0.0002 0.0001 0.0005
Bud Site 0.0009 0.0069 0.0018 0.0119 0.0001 0.0001 0.004 0.0263 0.0137 0.0128 0.0016 0.0006 0.0022 0.0014 0.0048 0.0001 0.0001 0.0001
Cell Periphery 0.0025 0.0013 0.0016 0.0026 0.0002 0.0002 0.0018 0.0018 0.0015 0.0015 0.0003 0.0006 0.0007 0.0006 0.0006 0.0018 0.0001 0.0002
Cytoplasm 0.3428 0.3886 0.4324 0.3944 0.2954 0.4966 0.3228 0.4307 0.3841 0.4886 0.4161 0.458 0.2438 0.3692 0.2985 0.2482 0.3406 0.3536
Cytoplasmic Foci 0.0148 0.0107 0.0205 0.011 0.0211 0.0098 0.0334 0.0129 0.0284 0.0136 0.0181 0.0128 0.0168 0.0193 0.0145 0.008 0.012 0.0093
Eisosomes 0.0004 0.0001 0.0002 0.0013 0.0003 0 0.0004 0.0002 0.0006 0.0002 0.0001 0.0001 0.0003 0.0001 0.0002 0.0006 0.0001 0.0001
Endoplasmic Reticulum 0.1465 0.1743 0.1606 0.1407 0.1487 0.1363 0.1998 0.2117 0.1772 0.0848 0.1663 0.1728 0.0564 0.0855 0.0763 0.037 0.0408 0.0233
Endosome 0.0293 0.016 0.0118 0.0194 0.0318 0.0172 0.0334 0.0239 0.027 0.0132 0.0145 0.0166 0.009 0.0217 0.0126 0.0033 0.0142 0.0063
Golgi 0.0061 0.0012 0.0017 0.0025 0.004 0.0006 0.0077 0.002 0.0063 0.0025 0.0021 0.002 0.0009 0.0019 0.0008 0.0025 0.0003 0.0002
Lipid Particles 0.0149 0.0092 0.009 0.0069 0.0457 0.0042 0.0158 0.0047 0.0111 0.0019 0.0046 0.0038 0.0022 0.0014 0.0015 0.0013 0.0005 0.0009
Mitochondria 0.0034 0.0004 0.002 0.0476 0.0015 0.0006 0.0133 0.0009 0.003 0.0017 0.0006 0.0036 0.0025 0.0008 0.0013 0.0003 0.0006 0.0006
None 0.3878 0.3649 0.3244 0.3018 0.4194 0.3198 0.2751 0.2508 0.2646 0.3121 0.3479 0.2837 0.6452 0.4827 0.5613 0.6685 0.5768 0.5902
Nuclear Periphery 0.0108 0.0115 0.0055 0.007 0.0073 0.005 0.0133 0.0063 0.0108 0.0077 0.005 0.0091 0.0044 0.0046 0.0049 0.0023 0.0051 0.0016
Nucleolus 0.0004 0.0003 0.0002 0.0032 0.0002 0.0001 0.0022 0.0007 0.0008 0.0005 0.0005 0.0006 0.0012 0.0004 0.0013 0.0001 0.0001 0.0002
Nucleus 0.0037 0.0034 0.0024 0.0045 0.0025 0.002 0.0092 0.0057 0.0071 0.0058 0.0027 0.0057 0.0026 0.0044 0.0058 0.0014 0.0028 0.0029
Peroxisomes 0.0069 0.0001 0.007 0.0013 0.0112 0.0002 0.0083 0.0004 0.0086 0.0009 0.0034 0.001 0.0003 0.0002 0.0004 0.0023 0.0002 0.0002
Punctate Nuclear 0.0039 0.0016 0.0027 0.0049 0.0045 0.0006 0.0128 0.0027 0.0059 0.0034 0.0118 0.0045 0.0039 0.001 0.0051 0.0006 0.0006 0.0042
Vacuole 0.0061 0.0076 0.0043 0.0148 0.0032 0.0048 0.008 0.007 0.0068 0.0055 0.002 0.0045 0.0036 0.0039 0.0031 0.0011 0.0038 0.0015
Vacuole Periphery 0.0011 0.0004 0.0004 0.0064 0.0006 0.0005 0.0016 0.0006 0.001 0.0007 0.0003 0.0012 0.0004 0.0004 0.0004 0.0002 0.0004 0.0002

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression – – – – – – – – – –
Translational Efficiency – – – – – – – – – –

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression –
Translational Efficiency –

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1693 2053 71 1483 1694 1967 1296 1578 3387 4020 1367 3061

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 594.55 736.30 816.53 845.35 670.06 722.72 754.08 819.65 632.32 729.66 757.32 832.10
Standard Deviation 81.77 105.14 116.04 163.23 217.09 93.49 111.40 156.66 168.34 99.84 112.51 160.39
Intensity Change Log 2 — 0.308496 0.457708 0.507751 — 0.109147 0.170427 0.290718 — 0.206307 0.312632 0.396830

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000076 0.000572 0.000639 0.003553 0.000123 0.000288 0.000189 0.004907 0.000100 0.000433 0.000213 0.004251
Bud Neck 0.011114 0.052703 0.001088 0.014333 0.018895 0.043578 0.003655 0.016653 0.015006 0.048238 0.003522 0.015529
Bud Site 0.001970 0.017376 0.001841 0.063172 0.003154 0.011491 0.011189 0.076002 0.002562 0.014496 0.010703 0.069786
Cell Periphery 0.000182 0.000279 0.000314 0.001051 0.000126 0.000216 0.000208 0.001944 0.000154 0.000248 0.000213 0.001511
Cytoplasm 0.477583 0.357966 0.316521 0.417113 0.438920 0.328496 0.442705 0.471623 0.458246 0.343546 0.436152 0.445214
Cytoplasmic Foci 0.208843 0.274029 0.047872 0.063261 0.211290 0.293191 0.029536 0.067423 0.210067 0.283405 0.030489 0.065407
Eisosomes 0.000237 0.000254 0.000111 0.000130 0.000295 0.000333 0.000063 0.000204 0.000266 0.000293 0.000065 0.000168
Endoplasmic Reticulum 0.001272 0.003075 0.007234 0.023870 0.000850 0.005450 0.003954 0.026131 0.001061 0.004237 0.004124 0.025036
Endosome 0.009361 0.021668 0.003853 0.012519 0.007700 0.039374 0.002600 0.010082 0.008530 0.030331 0.002665 0.011263
Golgi 0.001470 0.009718 0.000144 0.006393 0.001970 0.011116 0.000248 0.003595 0.001720 0.010402 0.000243 0.004950
Lipid Particles 0.017509 0.014831 0.003574 0.007235 0.013913 0.029999 0.001820 0.006469 0.015711 0.022252 0.001912 0.006840
Mitochondria 0.003738 0.023649 0.000358 0.009462 0.006410 0.015660 0.002174 0.005306 0.005074 0.019740 0.002080 0.007320
Mitotic Spindle 0.001225 0.005224 0.000243 0.040097 0.001150 0.003908 0.004247 0.016228 0.001188 0.004580 0.004039 0.027792
None 0.011348 0.003104 0.004864 0.002053 0.002397 0.002282 0.004604 0.001619 0.006872 0.002701 0.004618 0.001829
Nuclear Periphery 0.000638 0.001079 0.000803 0.001411 0.000610 0.001072 0.002063 0.000775 0.000624 0.001076 0.001998 0.001083
Nuclear Periphery Foci 0.000591 0.000535 0.003402 0.003174 0.000345 0.000648 0.001181 0.002084 0.000468 0.000590 0.001296 0.002612
Nucleolus 0.002101 0.001856 0.001407 0.000493 0.000747 0.002143 0.000473 0.000367 0.001423 0.001996 0.000522 0.000428
Nucleus 0.210575 0.113710 0.545031 0.125447 0.241191 0.094899 0.436204 0.142618 0.225888 0.104506 0.441856 0.134299
Peroxisomes 0.003833 0.019338 0.000684 0.003413 0.005675 0.014197 0.001181 0.007567 0.004755 0.016823 0.001155 0.005554
Vacuole 0.035642 0.076129 0.059739 0.196012 0.043619 0.098814 0.051347 0.136977 0.039632 0.087229 0.051783 0.165579
Vacuole Periphery 0.000689 0.002904 0.000277 0.005807 0.000620 0.002848 0.000357 0.001427 0.000654 0.002877 0.000353 0.003549

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -7.55 -4.75 -3.66 -2.87 -2.52 -4.64 -2.02 -4.87 -4.64 -4.74 -8.83 -3.29 -6.09 -5.40 -5.78
Bud Neck -16.21 12.17 -0.06 15.78 -9.89 -10.00 11.49 2.87 12.20 -8.46 -18.61 13.21 2.23 19.82 -10.34
Bud Site -12.79 -0.33 -12.58 -7.60 -12.54 -6.89 -3.37 -14.08 -11.73 -11.20 -13.93 -3.76 -18.85 -13.80 -13.28
Cell Periphery -1.92 -3.67 -3.07 -2.37 -2.05 -5.52 -4.95 -3.18 -2.96 -3.00 -3.51 -3.46 -4.03 -3.60 -3.79
Cytoplasm 14.24 5.39 8.67 -3.74 -2.95 13.21 2.17 -1.23 -13.14 -3.08 19.32 5.32 5.20 -11.86 -1.32
Cytoplasmic Foci -9.15 16.89 30.15 39.64 -0.26 -11.82 35.69 27.17 41.67 -10.34 -14.76 48.18 40.39 57.23 -10.78
Eisosomes -0.76 5.10 9.35 8.56 1.10 -1.45 11.83 4.76 6.63 -6.17 -1.56 16.82 8.49 10.13 -7.20
Endoplasmic Reticulum -2.33 -4.16 -5.45 -4.71 -2.07 -5.94 -3.59 -6.86 -4.97 -5.38 -5.82 -3.65 -8.74 -6.87 -6.39
Endosome -10.43 5.41 0.60 9.87 -4.06 -18.96 7.59 -0.30 18.14 -6.71 -21.28 11.38 0.26 20.24 -9.05
Golgi -11.04 8.85 -2.39 5.16 -3.92 -9.90 7.83 -1.01 8.22 -4.42 -14.66 10.26 -2.57 9.41 -5.58
Lipid Particles 1.88 10.34 8.34 7.16 -1.23 -8.86 13.69 7.95 14.50 -5.33 -5.38 18.54 11.46 15.73 -5.98
Mitochondria -12.07 6.30 -1.36 8.72 -4.00 -6.15 3.79 1.83 8.42 -2.04 -13.04 3.96 0.26 12.02 -3.09
Mitotic Spindle -3.28 1.50 -8.77 -7.44 -9.23 -2.73 -2.17 -5.98 -4.56 -4.25 -4.27 -2.21 -10.58 -8.67 -8.36
None 5.99 4.08 7.10 2.71 2.01 0.22 -2.49 1.56 1.54 5.91 5.41 3.39 7.13 3.05 5.82
Nuclear Periphery -1.29 -2.15 -8.53 -1.93 -5.46 -2.51 -2.18 -5.15 -0.04 1.51 -2.28 -2.19 -9.89 -1.66 0.97
Nuclear Periphery Foci 0.49 -3.50 -3.96 -4.38 1.31 -1.52 -3.70 -5.98 -5.99 -2.24 -0.72 -4.25 -6.43 -6.60 -2.54
Nucleolus 0.81 2.44 7.46 5.40 3.34 -6.39 4.43 5.52 8.38 1.91 -2.69 7.85 8.73 9.40 2.29
Nucleus 17.41 -9.22 9.73 -5.70 10.92 26.48 -21.65 12.36 -11.34 30.25 30.87 -26.02 15.58 -11.96 34.23
Peroxisomes -13.25 7.32 2.93 14.84 -4.70 -10.00 8.69 -0.03 7.39 -4.96 -16.53 9.60 1.16 15.44 -5.62
Vacuole -14.17 -2.98 -32.06 -25.41 -13.58 -15.56 -6.60 -24.52 -14.03 -17.33 -20.92 -8.30 -39.85 -28.11 -26.82
Vacuole Periphery -4.85 3.76 -3.18 -0.54 -3.69 -14.31 2.89 -1.91 6.64 -3.10 -9.07 3.37 -3.58 1.36 -4.33
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Cell wall protein of unknown function; localizes to the cytoplasm; deletion improves xylose fermentation in industrially engineered strains; YLR042C is not an essential gene
Localization
Cell Percentages —
Cell Cycle Regulation No
Subcompartmental Group N/A

Nfg1

Nfg1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Nfg1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available