Standard name
Human Ortholog
Description Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 – – 0 0 0 0 – 0 0 0 0 0 0 0.07 0.06 0.05 0.05 0 0 0 0 0 0
Endoplasmic Reticulum 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0.89 – – 0.91 0.9 0.79 0.83 – 0.73 0.7 0.67 0.68 0.88 0.85 0.73 0.78 0.81 0.75 0.78 0.75 0.66 0.87 0.81 0.83
Nuclear Periphery 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.62 – – 0.26 0.17 0.38 0.3 – 0.43 0.49 0.73 0.55 0.23 0.27 0.33 0.22 0.21 0.27 0.16 0.2 0.32 0.1 0.12 0.08
Peroxisomes 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
Bud Neck 0 – – 0 0 0 2 – 1 3 1 3 0 0 0 0 0 1 0 0 0 0 0 0
Bud Site 0 – – 0 0 0 3 – 2 5 1 4 0 1 2 0 0 1 – – – – – –
Cell Periphery 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 1 – – 4 7 3 2 – 7 4 3 5 3 9 16 19 19 15 0 0 0 0 1 1
Endoplasmic Reticulum 0 – – 0 0 1 0 – 0 0 0 0 0 1 0 2 1 3 0 0 0 0 0 0
Endosome 0 – – 0 2 0 2 – 1 2 0 0 1 1 9 3 5 4 0 0 0 0 0 1
Golgi 0 – – 0 0 0 0 – 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0
Mitochondria 3 – – 0 0 1 3 – 1 5 5 1 0 0 0 5 3 11 0 0 0 0 0 1
Nucleus 107 – – 157 224 143 298 – 136 185 77 157 70 185 159 257 310 215 93 40 11 32 107 132
Nuclear Periphery 0 – – 0 0 0 1 – 1 2 0 0 0 0 0 1 2 3 0 0 0 0 0 0
Nucleolus 74 – – 45 41 69 109 – 80 131 84 127 18 59 72 71 80 76 19 10 5 3 15 13
Peroxisomes 0 – – 0 0 0 1 – 0 0 0 0 0 1 2 3 1 2 0 0 0 0 0 0
SpindlePole 0 – – 0 0 0 2 – 0 2 0 1 1 1 9 6 4 4 0 0 0 0 0 0
Vac/Vac Membrane 0 – – 2 1 2 0 – 1 3 0 2 0 1 2 3 7 9 5 0 0 0 4 6
Unique Cell Count 120 172 248 181 359 187 266 115 230 80 217 217 328 384 285 120 54 18 37 134 161
Labelled Cell Count 185 208 275 219 423 230 342 171 300 93 259 271 371 433 344 120 54 18 37 134 161


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 11.0 – – 12.6 13.7 11.4 11.4 – 10.0 10.5 8.3 9.7 14.5 14.3 13.2 19.3 19.9 17.6 – 12.0 13.1
Std Deviation (1e-4) 2.9 – – 2.8 3.0 2.8 2.7 – 2.8 2.7 2.4 2.6 3.4 3.4 3.9 6.7 8.0 7.1 – 2.6 2.5
Intensity Change (Log2) – – – – – – – – – – – – – – – – – – – – –

RAP60RAP140RAP220RAP300RAP460RAP540RAP620RAP70001020HU80HU120HU16001020rpd3Δ_1rpd3Δ_2rpd3Δ_301020WT1AF140AF18001020
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – – – –
Bud Neck – – – – – – – – – – – – – – –
Bud Site – – – – – – – – – – – – – – –
Cell Periphery – – – – – – – – – – – – – – –
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – – – –
Endosome – – – – – – – – – – – – – – –
Golgi – – – – – – – – – – – – – – –
Mitochondria – – – – – – – – – – – – – – –
Nuclear Periphery – – – – – – – – – – – – – – –
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – – – –
Peroxisomes – – – – – – – – – – – – – – –
SpindlePole – – – – – – – – – – – – – – –
Vac – – – – – – – – – – – – – – –

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 10.2123 9.7434 8.9116 8.7208 8.2968 8.8415 8.9427 9.043 8.9405 8.8632 7.6687 8.4308 8.1105 7.1262 6.9034 6.7202 6.5119 6.0146
Actin 0.0088 0 0.001 0 0.0001 0.0005 0.0273 0 0.0006 0.0037 0.0057 0.0052 0.0628 0 0.0212 0 0 0.0027
Bud 0.0007 0 0.0001 0 0.0005 0.0001 0.0006 0 0.0001 0.0001 0.0011 0.0001 0.0002 0 0.0002 0 0 0.0001
Bud Neck 0.0008 0 0.0001 0 0.0005 0.0003 0.0006 0 0.0002 0.0001 0.0003 0.0003 0.0007 0 0.0001 0 0.0001 0.0005
Bud Periphery 0.0013 0 0.0004 0 0.0015 0.0001 0.0008 0 0.0001 0.0001 0.0039 0.0002 0.0003 0 0.0002 0 0 0.0002
Bud Site 0.0016 0 0.0002 0 0.0008 0.0001 0.0025 0 0.0003 0.0001 0.0017 0.0002 0.0007 0 0.0013 0 0 0.0003
Cell Periphery 0.0006 0 0.0004 0 0.0006 0 0.0004 0 0 0 0.0003 0 0.0001 0 0.0001 0 0 0.0001
Cytoplasm 0.0083 0.0001 0.0001 0 0.0003 0.0001 0.0029 0 0.0008 0.0022 0 0.0001 0.0021 0 0.0004 0 0 0.0003
Cytoplasmic Foci 0.008 0 0.0007 0 0.0057 0.0006 0.0172 0 0.0051 0.0025 0.0009 0.0011 0.0067 0 0.0018 0 0 0.0064
Eisosomes 0.0001 0 0 0 0 0 0.0007 0 0 0.0001 0.0002 0 0.0004 0 0.0002 0 0 0
Endoplasmic Reticulum 0.006 0 0 0 0.0001 0.0001 0.0039 0 0.0004 0.0023 0.0001 0.0001 0.002 0 0.0004 0 0 0.0001
Endosome 0.0094 0 0.0005 0 0.0016 0.0008 0.0095 0 0.0068 0.0145 0.0017 0.0016 0.01 0 0.0022 0 0 0.002
Golgi 0.003 0 0.0004 0 0.0011 0.0008 0.0046 0 0.0013 0.001 0.0024 0.0021 0.0072 0 0.0016 0 0 0.0026
Lipid Particles 0.0113 0 0.0031 0 0.0132 0.0019 0.0076 0 0.0026 0.0021 0.0053 0.0006 0.0057 0 0.0012 0 0 0.0061
Mitochondria 0.0105 0.0001 0.0016 0 0.0022 0.0066 0.0071 0.0002 0.0009 0.0029 0.0379 0.0091 0.0019 0.0001 0.0059 0.0001 0.0002 0.0019
None 0.0035 0 0.0001 0 0.0002 0.0002 0.0103 0 0.0009 0.0023 0.0002 0.0002 0.0025 0 0.0005 0 0 0.0002
Nuclear Periphery 0.0143 0.0019 0.0008 0.0001 0.0016 0.0009 0.011 0.0001 0.0036 0.0538 0.0006 0.0002 0.0046 0.0002 0.0063 0 0.0001 0.0006
Nucleolus 0.1078 0.0352 0.0453 0.0362 0.3859 0.235 0.1063 0.0551 0.0525 0.0369 0.4348 0.2252 0.0909 0.0587 0.063 0.0329 0.1662 0.182
Nucleus 0.7825 0.9616 0.9288 0.9635 0.5623 0.7439 0.7545 0.9443 0.9202 0.8545 0.4966 0.7515 0.7864 0.9408 0.8882 0.9669 0.833 0.7843
Peroxisomes 0.0013 0 0.0019 0 0.0006 0.0003 0.0149 0 0.0008 0.0004 0.0036 0.0017 0.0022 0 0.0034 0 0 0.001
Punctate Nuclear 0.0153 0.0006 0.011 0 0.0134 0.0072 0.015 0 0.0016 0.0173 0.0007 0.0002 0.0114 0.0001 0.0011 0 0.0004 0.0077
Vacuole 0.0026 0.0002 0.0021 0 0.0046 0.0002 0.0012 0.0001 0.0006 0.0006 0.0008 0.0001 0.0005 0 0.0002 0 0 0.0005
Vacuole Periphery 0.0025 0.0003 0.0013 0 0.0032 0.0002 0.0013 0.0001 0.0004 0.0026 0.001 0.0001 0.0006 0 0.0004 0 0 0.0004

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 34.7579 37.8506 23.0563 30.7727 31.9553 24.6328 39.9844 36.0466 34.3116 36.958
Translational Efficiency 1.1414 1.0543 1.3401 1.0953 1.1234 1.4864 1.0075 0.9691 1.0883 0.9887

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1526 947 662 1522 1406 1345 1409 1156 2932 2292 2071 2678

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 775.41 1089.51 1427.69 1380.38 976.02 1087.30 1333.40 1350.49 871.61 1088.21 1363.54 1367.48
Standard Deviation 147.60 205.38 300.35 276.39 208.63 208.25 244.95 280.56 205.56 207.07 267.56 278.59
Intensity Change Log 2 — 0.490648 0.880652 0.832034 — 0.155767 0.450127 0.468500 — 0.313682 0.656705 0.640827

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000565 0.000585 0.000715 0.000831 0.000466 0.000585 0.000680 0.000932 0.000517 0.000585 0.000691 0.000874
Bud Neck 0.004955 0.005070 0.007224 0.015755 0.002915 0.005292 0.009020 0.022453 0.003977 0.005200 0.008446 0.018646
Bud Site 0.001512 0.000448 0.000790 0.001606 0.000861 0.000913 0.000779 0.003209 0.001200 0.000721 0.000782 0.002298
Cell Periphery 0.000198 0.000020 0.000025 0.000074 0.000062 0.000044 0.000028 0.000167 0.000133 0.000034 0.000027 0.000114
Cytoplasm 0.003464 0.000086 0.000048 0.000327 0.000810 0.000457 0.000061 0.000753 0.002191 0.000304 0.000057 0.000511
Cytoplasmic Foci 0.000608 0.000806 0.000174 0.000484 0.000469 0.000270 0.000071 0.001546 0.000541 0.000492 0.000104 0.000942
Eisosomes 0.000061 0.000100 0.000108 0.000084 0.000096 0.000117 0.000111 0.000072 0.000077 0.000110 0.000110 0.000079
Endoplasmic Reticulum 0.001734 0.000803 0.000330 0.000511 0.000792 0.001461 0.000423 0.000753 0.001282 0.001189 0.000393 0.000616
Endosome 0.000292 0.000064 0.000012 0.000533 0.000102 0.000322 0.000016 0.001785 0.000201 0.000215 0.000014 0.001074
Golgi 0.000366 0.000425 0.000073 0.001028 0.000157 0.000145 0.000060 0.001241 0.000266 0.000260 0.000064 0.001120
Lipid Particles 0.000061 0.000114 0.000007 0.000063 0.000011 0.000227 0.000006 0.000119 0.000037 0.000180 0.000006 0.000087
Mitochondria 0.000843 0.003559 0.001426 0.002983 0.000671 0.001810 0.001393 0.004395 0.000761 0.002533 0.001404 0.003593
Mitotic Spindle 0.001662 0.002233 0.000104 0.005311 0.000518 0.002679 0.000479 0.008728 0.001113 0.002495 0.000359 0.006786
None 0.011330 0.000574 0.000701 0.001074 0.003333 0.000671 0.001193 0.001934 0.007496 0.000631 0.001036 0.001445
Nuclear Periphery 0.000139 0.000039 0.000035 0.001175 0.000025 0.000288 0.000052 0.000819 0.000085 0.000185 0.000047 0.001021
Nuclear Periphery Foci 0.000821 0.000146 0.000007 0.000394 0.000109 0.000802 0.000013 0.001023 0.000480 0.000531 0.000011 0.000665
Nucleolus 0.135620 0.135738 0.094288 0.084169 0.126626 0.128710 0.091328 0.087451 0.131307 0.131614 0.092274 0.085586
Nucleus 0.833656 0.845356 0.884787 0.878129 0.858279 0.851304 0.890022 0.855351 0.845464 0.848846 0.888349 0.868296
Peroxisomes 0.001216 0.003354 0.008776 0.003064 0.003141 0.003015 0.003917 0.002932 0.002139 0.003155 0.005470 0.003007
Vacuole 0.000448 0.000195 0.000180 0.001134 0.000327 0.000471 0.000153 0.002275 0.000390 0.000357 0.000162 0.001627
Vacuole Periphery 0.000448 0.000284 0.000189 0.001272 0.000230 0.000416 0.000195 0.002062 0.000344 0.000362 0.000193 0.001613

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -0.56 -5.04 -8.45 -7.13 -3.96 -3.10 -9.52 -13.58 -8.64 -8.05 -2.48 -9.46 -15.40 -10.75 -8.66
Bud Neck -0.47 -5.42 -11.81 -11.46 -9.11 -4.66 -12.19 -13.88 -11.85 -9.38 -3.59 -12.03 -18.30 -16.19 -12.29
Bud Site 3.23 2.04 -1.05 -5.19 -3.88 -0.21 0.08 -4.95 -5.23 -6.28 1.58 1.51 -4.39 -6.59 -7.35
Cell Periphery 5.47 5.25 3.30 -4.49 -3.94 0.67 1.43 -3.05 -4.20 -4.99 4.64 5.15 0.42 -5.46 -6.28
Cytoplasm 3.66 3.71 3.37 -2.25 -3.08 0.62 1.71 -0.01 -1.10 -4.33 3.46 4.07 3.11 -1.34 -5.28
Cytoplasmic Foci -0.31 1.52 0.44 0.51 -1.86 0.65 1.37 -1.65 -2.42 -2.95 0.09 2.15 -0.99 -0.86 -3.61
Eisosomes -6.00 -8.62 -4.74 2.33 4.33 -3.32 -3.13 3.90 7.45 8.52 -7.18 -9.13 -0.77 6.72 8.68
Endoplasmic Reticulum 7.68 12.47 10.37 4.33 -7.03 -1.47 7.70 -0.98 1.28 -5.72 0.32 13.80 8.40 1.83 -7.46
Endosome 3.10 4.01 -0.98 -2.28 -2.57 -1.73 1.82 -2.56 -2.09 -2.74 -0.17 4.35 -2.77 -2.65 -3.57
Golgi -0.13 1.33 -0.95 -0.81 -1.57 0.16 1.34 -2.07 -2.12 -2.33 0.06 1.68 -1.88 -1.90 -2.55
Lipid Particles -0.79 2.48 -0.16 0.68 -2.16 -2.14 1.71 -2.37 0.89 -2.45 -2.18 2.65 -1.95 1.25 -3.26
Mitochondria -1.90 -7.87 -9.07 0.24 -6.51 -1.67 -7.69 -5.88 -2.82 -4.70 -2.48 -10.62 -9.49 -1.55 -7.27
Mitotic Spindle -0.41 2.71 -3.01 -2.12 -4.57 -1.88 -0.07 -4.93 -3.62 -4.94 -1.54 1.78 -5.77 -4.09 -6.56
None 6.55 6.46 6.20 -4.50 -3.05 3.26 2.49 1.57 -5.05 -2.09 7.27 6.71 6.32 -6.42 -1.94
Nuclear Periphery 5.40 5.35 -2.40 -2.66 -2.65 -1.36 -5.15 -3.54 -1.79 -3.40 -0.88 3.42 -3.62 -2.92 -3.76
Nuclear Periphery Foci 2.59 3.38 1.90 -1.34 -3.45 -1.94 3.47 -1.53 -0.05 -1.73 -0.10 3.69 -0.20 -0.08 -2.59
Nucleolus 0.05 6.75 8.49 7.35 1.06 -0.32 6.29 5.69 5.86 -0.12 0.01 9.41 10.11 9.41 0.61
Nucleus -1.75 -7.36 -5.25 -3.10 2.01 1.13 -5.07 2.15 1.18 6.09 -0.81 -9.24 -2.37 -1.53 5.76
Peroxisomes -7.30 -9.44 -5.67 0.11 6.38 0.43 -2.35 -0.40 -0.88 1.93 -4.79 -9.99 -4.30 -0.52 5.84
Vacuole 1.86 1.92 -1.99 -2.80 -2.82 -1.13 1.51 -3.63 -3.38 -3.94 0.29 2.47 -4.07 -4.23 -4.84
Vacuole Periphery 1.57 2.52 -2.04 -2.59 -2.86 -2.12 0.85 -3.32 -2.89 -3.40 -0.25 2.64 -3.83 -3.79 -4.43
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway
Localization
Cell Percentages nucleus (95%)
Cell Cycle Regulation No
Subcompartmental Group nucleus-2

Rsc9

Rsc9


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rsc9-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available