Standard name | |
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Human Ortholog | |
Description | Protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 3 |
Bud | 5 | 1 | 2 | 3 | 0 | 4 | 7 | 5 | 12 | 12 | 10 | 8 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 6 | 6 | 7 | 9 | 10 | 16 | 15 | 13 | 13 | 11 | 18 | 5 | 7 | 10 | 16 | 24 | 14 | 0 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 294 | 250 | 261 | 337 | 515 | 497 | 517 | 466 | 431 | 438 | 358 | 384 | 206 | 417 | 341 | 122 | 131 | 109 | 286 | 241 | 245 | 184 | 426 | 362 |
Endoplasmic Reticulum | 9 | 10 | 4 | 1 | 0 | 4 | 4 | 6 | 2 | 1 | 5 | 15 | 4 | 3 | 4 | 3 | 3 | 6 | 10 | 5 | 11 | 3 | 5 | 7 |
Endosome | 4 | 0 | 3 | 3 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 0 | 8 | 2 | 5 | 2 | 1 | 2 |
Golgi | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 3 | 3 | 0 | 0 | 0 | 0 |
Mitochondria | 13 | 4 | 0 | 5 | 7 | 64 | 115 | 54 | 128 | 91 | 166 | 82 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 0 | 5 | 0 | 0 | 2 |
Nucleus | 0 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 9 | 2 | 2 | 0 | 0 | 1 | 2 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | 3 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 |
Vac/Vac Membrane | 0 | 1 | 4 | 4 | 21 | 18 | 25 | 18 | 15 | 45 | 14 | 42 | 0 | 0 | 1 | 2 | 4 | 0 | 2 | 0 | 2 | 4 | 0 | 2 |
Unique Cell Count | 319 | 263 | 275 | 348 | 537 | 549 | 599 | 531 | 532 | 556 | 485 | 500 | 213 | 421 | 345 | 131 | 146 | 115 | 325 | 260 | 286 | 204 | 440 | 394 |
Labelled Cell Count | 332 | 274 | 285 | 362 | 559 | 601 | 687 | 570 | 608 | 611 | 566 | 555 | 220 | 429 | 357 | 146 | 172 | 130 | 325 | 260 | 286 | 204 | 440 | 394 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.5 | 9.4 | 7.9 | 7.7 | 8.0 | 6.6 | 6.4 | 7.0 | 6.0 | 6.4 | 5.8 | 6.5 | 8.5 | 9.3 | 9.4 | 14.3 | 14.3 | 14.0 | 7.7 | 8.5 | 9.4 |
Std Deviation (1e-4) | 1.0 | 1.1 | 1.1 | 1.3 | 1.6 | 1.4 | 1.4 | 1.6 | 1.2 | 1.2 | 1.2 | 1.2 | 1.0 | 1.2 | 1.3 | 3.0 | 2.8 | 2.5 | 1.3 | 1.6 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.04 | 0.02 | -0.25 | -0.31 | -0.17 | -0.39 | -0.29 | -0.45 | -0.29 | 0.11 | 0.24 | 0.25 | 0.85 | 0.86 | 0.82 | -0.03 | 0.11 | 0.26 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -0.1 | -0.5 | -0.4 | 0.4 | 0.5 | 0.2 | 0.1 | 0.1 | 1.1 | 0 | -0.5 | 0.6 | 4.2 | 5.4 | 4.1 |
Cytoplasm | 1.2 | 0.7 | -2.2 | -3.8 | -3.2 | -5.4 | -6.0 | -7.2 | -6.5 | 1.0 | 3.4 | 2.9 | -0.7 | -2.0 | -0.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.3 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 5.9 | 7.8 | 5.5 | 8.9 | 7.1 | 11.0 | 7.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 1.9 | 1.5 | 2.1 | 1.6 | 1.2 | 3.8 | 1.2 | 3.9 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.9247 | 6.3067 | 5.8197 | 5.3179 | 5.0372 | 5.8238 | 4.6825 | 5.5129 | 5.0124 | 4.5125 | 4.1773 | 5.2283 | 4.496 | 5.547 | 4.8286 | 4.7066 | 4.1145 | 5.091 |
Actin | 0.0205 | 0.002 | 0.0103 | 0.0004 | 0.0001 | 0.0037 | 0.0123 | 0.0002 | 0.0102 | 0.0011 | 0.0005 | 0.0024 | 0.0429 | 0.0006 | 0.0299 | 0.0002 | 0.0316 | 0.0104 |
Bud | 0.0047 | 0.0068 | 0.0073 | 0.0003 | 0.0001 | 0.0007 | 0.0049 | 0.0002 | 0.0042 | 0.0043 | 0.0009 | 0.0001 | 0.0035 | 0.0005 | 0.0099 | 0.0006 | 0.0009 | 0.0041 |
Bud Neck | 0.0038 | 0.0003 | 0.0006 | 0.0005 | 0.0004 | 0.0047 | 0.0033 | 0.0003 | 0.0037 | 0.0005 | 0.0013 | 0.0012 | 0.0033 | 0.0003 | 0.0056 | 0.0003 | 0.0009 | 0.0016 |
Bud Periphery | 0.003 | 0.0031 | 0.0035 | 0.0001 | 0 | 0.0005 | 0.0026 | 0.0001 | 0.0025 | 0.0015 | 0.001 | 0.0002 | 0.002 | 0.0001 | 0.0045 | 0.0002 | 0.0009 | 0.0021 |
Bud Site | 0.0073 | 0.0188 | 0.003 | 0.0003 | 0 | 0.0003 | 0.0082 | 0.0011 | 0.0172 | 0.0013 | 0.0141 | 0.0002 | 0.0056 | 0.014 | 0.0166 | 0.0003 | 0.0013 | 0.0008 |
Cell Periphery | 0.0007 | 0.0006 | 0.0003 | 0.0001 | 0 | 0.0001 | 0.0005 | 0.0001 | 0.0003 | 0.0004 | 0.0001 | 0.0001 | 0.0006 | 0.0004 | 0.0004 | 0.0001 | 0.0001 | 0.0003 |
Cytoplasm | 0.6047 | 0.8249 | 0.8734 | 0.8695 | 0.9748 | 0.7004 | 0.6486 | 0.9023 | 0.7962 | 0.8568 | 0.7921 | 0.7194 | 0.6169 | 0.8888 | 0.8015 | 0.9502 | 0.7977 | 0.6405 |
Cytoplasmic Foci | 0.1082 | 0.0597 | 0.0247 | 0.0455 | 0.007 | 0.1056 | 0.0911 | 0.0308 | 0.0482 | 0.0267 | 0.048 | 0.1152 | 0.0781 | 0.0325 | 0.028 | 0.0113 | 0.0482 | 0.116 |
Eisosomes | 0.0003 | 0 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0004 | 0 | 0.0002 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0269 | 0.0105 | 0.004 | 0.0046 | 0.0009 | 0.0182 | 0.0177 | 0.004 | 0.0045 | 0.004 | 0.017 | 0.0114 | 0.0422 | 0.0081 | 0.0265 | 0.0034 | 0.0035 | 0.0257 |
Endosome | 0.1438 | 0.0493 | 0.0337 | 0.0634 | 0.007 | 0.1257 | 0.1344 | 0.0407 | 0.0512 | 0.066 | 0.0712 | 0.1101 | 0.108 | 0.038 | 0.0458 | 0.0154 | 0.0547 | 0.1501 |
Golgi | 0.0076 | 0.0016 | 0.0034 | 0.0014 | 0.0002 | 0.0074 | 0.0102 | 0.0015 | 0.0038 | 0.0071 | 0.0053 | 0.007 | 0.0139 | 0.0036 | 0.0064 | 0.0003 | 0.02 | 0.0107 |
Lipid Particles | 0.0186 | 0.0022 | 0.0037 | 0.0011 | 0 | 0.0157 | 0.0111 | 0.0002 | 0.0017 | 0.0034 | 0.0047 | 0.0085 | 0.011 | 0.0031 | 0.0021 | 0.0002 | 0.0062 | 0.0083 |
Mitochondria | 0.0054 | 0.0012 | 0.0013 | 0.0002 | 0.0001 | 0.0012 | 0.0091 | 0.0003 | 0.0078 | 0.0036 | 0.0077 | 0.0015 | 0.0046 | 0.0002 | 0.0022 | 0.0001 | 0.0065 | 0.0017 |
None | 0.0137 | 0.0091 | 0.0115 | 0.0052 | 0.0063 | 0.0061 | 0.0169 | 0.013 | 0.0226 | 0.0105 | 0.0136 | 0.0074 | 0.0278 | 0.005 | 0.0042 | 0.0054 | 0.0115 | 0.004 |
Nuclear Periphery | 0.0036 | 0.0009 | 0.0008 | 0.0011 | 0.0002 | 0.0018 | 0.0036 | 0.0005 | 0.0045 | 0.0012 | 0.0018 | 0.0024 | 0.0106 | 0.0006 | 0.0057 | 0.0015 | 0.0018 | 0.0021 |
Nucleolus | 0.0005 | 0.0007 | 0.0003 | 0 | 0 | 0.0001 | 0.0009 | 0 | 0.0005 | 0.0002 | 0.0011 | 0.0002 | 0.0008 | 0 | 0.0002 | 0 | 0.0001 | 0.0003 |
Nucleus | 0.002 | 0.0016 | 0.0012 | 0.0008 | 0.0004 | 0.0008 | 0.0035 | 0.0012 | 0.0038 | 0.0019 | 0.0028 | 0.0014 | 0.0038 | 0.0007 | 0.0025 | 0.0015 | 0.0012 | 0.0043 |
Peroxisomes | 0.0081 | 0.0005 | 0.01 | 0.0003 | 0 | 0.0011 | 0.006 | 0.0001 | 0.0056 | 0.0006 | 0.0047 | 0.0019 | 0.007 | 0.0002 | 0.0013 | 0.0001 | 0.0054 | 0.005 |
Punctate Nuclear | 0.0046 | 0.0012 | 0.0038 | 0.0004 | 0 | 0.0013 | 0.0027 | 0.0003 | 0.0039 | 0.0009 | 0.0045 | 0.0047 | 0.0071 | 0.0002 | 0.0013 | 0.0008 | 0.0027 | 0.0023 |
Vacuole | 0.0108 | 0.0042 | 0.0027 | 0.004 | 0.0022 | 0.0038 | 0.0109 | 0.0027 | 0.0065 | 0.0067 | 0.0062 | 0.0041 | 0.0084 | 0.0028 | 0.0042 | 0.0072 | 0.0033 | 0.0082 |
Vacuole Periphery | 0.0013 | 0.0007 | 0.0005 | 0.0008 | 0.0003 | 0.0009 | 0.0015 | 0.0004 | 0.0012 | 0.0013 | 0.0014 | 0.0008 | 0.0015 | 0.0003 | 0.001 | 0.0009 | 0.0013 | 0.0017 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 17.8448 | 11.521 | 26.9625 | 23.2019 | 10.9256 | 12.8808 | 19.4895 | 23.5866 | 22.2564 | 23.0328 |
Translational Efficiency | 0.8254 | 1.3048 | 0.5442 | 0.8321 | 1.33 | 1.6316 | 0.9968 | 0.7649 | 1.0208 | 0.7196 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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