Standard name
Human Ortholog
Description RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.55 0.73 0.74 0.78 0.73 0.44 0.53 0.57 0.53 0.54 0.39 0.5 0.63 0.74 0.71 0.3 0.29 0.32 0.41 0.43 0.55 0.54 0.71 0.73
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0.06 0.06 0 0 0 0 0 0
Endosome 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0.05 0.13 0.15 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.28 0.14 0.37 0.43 0.2 0.63 0.56 0.54 0.64 0.64 0.72 0.6 0.05 0 0.15 0 0.05 0 0.13 0.17 0.18 0.11 0.08 0.12
Nucleus 0.07 0 0 0 0 0 0.06 0 0.06 0 0.06 0.07 0 0 0 0.17 0.2 0.16 0.1 0.06 0 0.05 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0.21 0.23 0 0 0.13 0.07 0 0 0 0 0 0 0.32 0.23 0.19 0.54 0.48 0.49 0.18 0.19 0.12 0.2 0.11 0.06
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 7 5
Bud 0 0 2 1 2 0 3 3 5 8 3 5 1 0 4 1 0 1 1 4 0 2 6 6
Bud Neck 0 0 0 0 0 0 2 2 1 1 0 2 0 0 0 0 0 0 0 2 0 1 3 1
Bud Site 1 0 0 0 0 1 4 7 1 2 0 7 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 2
Cytoplasm 41 161 56 49 122 81 153 219 102 161 58 132 199 310 341 109 98 123 48 116 47 116 324 360
Endoplasmic Reticulum 0 0 1 0 0 1 2 2 0 1 0 0 1 5 7 21 19 25 2 1 1 1 2 8
Endosome 3 3 0 0 8 1 0 1 1 0 0 0 12 16 7 18 43 60 4 8 0 4 6 6
Golgi 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 4 0 0 2 0
Mitochondria 21 31 28 27 33 116 161 208 123 191 106 158 15 9 74 13 15 6 15 46 15 22 34 58
Nucleus 5 4 0 0 6 8 16 16 11 13 9 18 11 9 6 64 68 61 11 15 0 10 3 0
Nuclear Periphery 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 2 2 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 2 1 1 0 3 3 2 3 2 2 1 4 1 2 1 5 6 6 3 11 1 4 9 6
Vac/Vac Membrane 16 51 1 1 22 13 11 10 1 7 1 11 99 96 92 197 159 189 21 50 10 43 48 27
Unique Cell Count 75 221 76 63 168 184 290 385 192 300 147 263 314 418 479 368 333 389 117 274 86 216 457 493
Labelled Cell Count 90 252 89 78 196 224 355 473 249 388 180 337 340 449 532 429 409 473 117 274 86 216 457 493


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 4.2 3.7 3.4 3.6 4.5 3.2 3.1 3.2 3.0 2.5 2.7 2.4 4.3 4.6 3.8 5.8 5.7 6.6 4.3 4.2 4.7
Std Deviation (1e-4) 0.5 1.1 2.2 2.1 3.8 1.5 1.9 1.8 2.3 1.0 1.2 1.3 1.0 1.2 0.9 1.0 1.2 1.5 1.1 1.1 1.6
Intensity Change (Log2) – – – 0.09 0.41 -0.1 -0.13 -0.11 -0.18 -0.45 -0.34 -0.49 0.34 0.42 0.16 0.77 0.75 0.94 0.33 0.29 0.45

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP70002468WT3HU80HU120HU16002468WT3rpd3Δ_1rpd3Δ_2rpd3Δ_302468WT1AF100AF140AF18002468
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – 0 0 0
Bud Neck – – – – – – – – – – – – 0 0 0
Bud Site – – – – – – – – – – – – 0 0 0
Cell Periphery – – – – – – – – – – – – 0 0 0
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – 0 0 0
Endosome – – – – – – – – – – – – 0 0 0
Golgi – – – – – – – – – – – – 0 0 0
Mitochondria – – – – – – – – – – – – 0 0 0
Nuclear Periphery – – – – – – – – – – – – 0 0 0
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – 0 0 0
Peroxisomes – – – – – – – – – – – – 0 0 0
SpindlePole – – – – – – – – – – – – 0 0 0
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – 0 0 0
Cytoplasm – – – – – – – – – – – – 0 0 0
Nucleus – – – – – – – – – – – – 0 0 0
Vacuole – – – – – – – – – – – – 8.3 7.5 7.7

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 0.1136 0.3644 0.3054 -0.1981 0.4586 -0.1682 1.9692 1.6333 1.4493 1.6156 0.9947 1.4246 -0.085 0.2609 -0.0983 0.3372 -0.0728 -0.14
Actin 0.047 0.0238 0.0198 0.0006 0.0007 0.0005 0.0143 0.0006 0.0021 0.0029 0.0085 0.0041 0.0068 0.0002 0.011 0.0117 0.0045 0.004
Bud 0.0039 0.0006 0.0005 0.0001 0.0001 0.0001 0.0009 0.0023 0.0006 0.002 0.0002 0.0005 0.0003 0.0002 0.0012 0.0002 0.0003 0.0001
Bud Neck 0.0082 0.0019 0.0085 0.0008 0.0008 0.008 0.0046 0.0006 0.0016 0.003 0.0008 0.0072 0.0038 0.0004 0.0026 0.0244 0.0009 0.0027
Bud Periphery 0.0032 0.0016 0.0011 0.0001 0 0.0001 0.0011 0.0008 0.0007 0.002 0.0002 0.0003 0.0006 0.0001 0.0004 0.0005 0.0003 0.0002
Bud Site 0.044 0.0104 0.0248 0.001 0.0002 0.0005 0.0122 0.011 0.0018 0.0061 0.0005 0.0003 0.0107 0.0013 0.0176 0.0014 0.0014 0.0003
Cell Periphery 0.002 0.0012 0.0015 0.0002 0.0001 0.0001 0.0003 0.0003 0.0001 0.0002 0.0001 0.0001 0.0003 0.0001 0.0003 0.0003 0.0001 0.0001
Cytoplasm 0.1944 0.365 0.3087 0.3709 0.3002 0.3083 0.2402 0.3912 0.3074 0.2651 0.2106 0.2936 0.1666 0.1731 0.1902 0.1666 0.2158 0.2064
Cytoplasmic Foci 0.0235 0.0192 0.0087 0.01 0.0025 0.0121 0.0277 0.016 0.017 0.0152 0.011 0.02 0.0595 0.0069 0.025 0.0286 0.0285 0.0163
Eisosomes 0.0009 0.0009 0.0005 0.0001 0.0001 0.0002 0.0002 0 0.0001 0.0001 0.0001 0.0001 0.0004 0.0001 0.0002 0.0001 0.0001 0.0001
Endoplasmic Reticulum 0.0142 0.0163 0.0234 0.0087 0.0043 0.0069 0.0124 0.0071 0.0046 0.0051 0.0029 0.0031 0.009 0.0047 0.0053 0.0039 0.0033 0.0036
Endosome 0.0303 0.0054 0.0113 0.0071 0.0022 0.0077 0.0332 0.0086 0.0163 0.0187 0.0134 0.0113 0.031 0.0169 0.01 0.014 0.0131 0.0068
Golgi 0.0105 0.0022 0.0026 0.0002 0.0001 0.0002 0.0129 0.0006 0.0058 0.0107 0.0135 0.0021 0.0144 0.0005 0.003 0.0062 0.0055 0.0016
Lipid Particles 0.0214 0.004 0.0044 0.0008 0.0002 0.002 0.0175 0.0015 0.004 0.0165 0.0106 0.0013 0.0216 0.0012 0.0038 0.0278 0.009 0.0046
Mitochondria 0.0535 0.006 0.0017 0.0006 0.0005 0.0009 0.0267 0.001 0.0041 0.0153 0.0081 0.0023 0.004 0.0006 0.0011 0.0211 0.0292 0.0018
None 0.4239 0.4581 0.4931 0.3879 0.4542 0.3338 0.4063 0.3408 0.3744 0.3045 0.2659 0.2433 0.557 0.5968 0.5735 0.5576 0.4876 0.5231
Nuclear Periphery 0.0195 0.0088 0.0105 0.0101 0.0081 0.0089 0.0327 0.0132 0.0168 0.0245 0.0221 0.012 0.0122 0.0076 0.0121 0.0105 0.0059 0.0119
Nucleolus 0.0053 0.0014 0.0011 0.0029 0.0044 0.0052 0.006 0.002 0.0036 0.0029 0.0029 0.003 0.0098 0.0024 0.0029 0.0011 0.0019 0.0032
Nucleus 0.0542 0.0421 0.0654 0.1804 0.1674 0.2793 0.1089 0.1662 0.2013 0.2449 0.3886 0.3455 0.0374 0.169 0.1 0.0683 0.1619 0.1626
Peroxisomes 0.0096 0.0037 0.0006 0.0002 0.0001 0.0002 0.0114 0.0008 0.0028 0.0059 0.0041 0.0007 0.0194 0.0004 0.0058 0.0433 0.0128 0.0127
Punctate Nuclear 0.0081 0.0212 0.0076 0.0138 0.0531 0.021 0.0219 0.0301 0.0296 0.0485 0.0338 0.0451 0.0324 0.0144 0.0293 0.0102 0.0156 0.0357
Vacuole 0.0177 0.0058 0.0035 0.0034 0.0008 0.0036 0.006 0.0046 0.0043 0.0043 0.0014 0.0034 0.0022 0.0026 0.0043 0.0016 0.0016 0.0017
Vacuole Periphery 0.0047 0.0005 0.0006 0.0003 0.0002 0.0003 0.0027 0.0006 0.001 0.0014 0.0006 0.0006 0.0007 0.0006 0.0004 0.0006 0.0004 0.0004

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 12.7003 14.5322 10.6151 11.5813 13.9966 10.4085 17.8504 14.7208 13.063 14.0039
Translational Efficiency 0.3506 0.4177 0.3202 0.2645 0.2201 0.4231 0.3103 0.2826 0.2574 0.2895

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
183 1543 143 735 1779 1461 92 119 1962 3004 235 854

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 631.52 679.09 1036.12 798.83 682.05 713.53 947.80 1112.25 677.34 695.84 1001.54 842.50
Standard Deviation 117.48 93.96 111.83 89.43 72.15 93.49 94.84 166.27 78.88 95.30 113.97 150.06
Intensity Change Log 2 — 0.104774 0.714291 0.339060 — 0.065097 0.474705 0.705532 — 0.084309 0.594861 0.540895

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000202 0.000370 0.001287 0.000107 0.000043 0.000128 0.000248 0.000010 0.000058 0.000253 0.000880 0.000094
Bud Neck 0.058131 0.016906 0.003577 0.002597 0.005985 0.015745 0.000714 0.001894 0.010849 0.016341 0.002456 0.002499
Bud Site 0.027544 0.005080 0.001876 0.003833 0.000776 0.005035 0.000628 0.000325 0.003273 0.005058 0.001387 0.003344
Cell Periphery 0.000387 0.000129 0.000191 0.000103 0.000065 0.000129 0.000221 0.000023 0.000095 0.000129 0.000203 0.000092
Cytoplasm 0.267949 0.390193 0.057952 0.238076 0.430341 0.384120 0.122236 0.450476 0.415194 0.387239 0.083118 0.267672
Cytoplasmic Foci 0.094836 0.131227 0.005941 0.017025 0.071565 0.125301 0.025948 0.000673 0.073736 0.128345 0.013773 0.014746
Eisosomes 0.000118 0.000081 0.000109 0.000034 0.000039 0.000070 0.000119 0.000002 0.000046 0.000076 0.000112 0.000030
Endoplasmic Reticulum 0.002847 0.001527 0.022294 0.002270 0.000778 0.001470 0.004605 0.000178 0.000971 0.001500 0.015369 0.001979
Endosome 0.010462 0.010069 0.003574 0.002315 0.002345 0.009410 0.003064 0.000060 0.003102 0.009749 0.003374 0.002001
Golgi 0.001101 0.001815 0.000127 0.001195 0.000424 0.001939 0.000073 0.000009 0.000487 0.001875 0.000106 0.001030
Lipid Particles 0.010399 0.009552 0.003943 0.001616 0.004704 0.009764 0.004201 0.000037 0.005235 0.009655 0.004044 0.001396
Mitochondria 0.005983 0.008127 0.000839 0.000455 0.003673 0.011686 0.000261 0.000257 0.003888 0.009858 0.000613 0.000428
Mitotic Spindle 0.008059 0.004383 0.000891 0.001528 0.002702 0.011236 0.000026 0.000193 0.003201 0.007716 0.000552 0.001342
None 0.006378 0.012345 0.001666 0.004920 0.003487 0.005736 0.001417 0.007111 0.003757 0.009131 0.001569 0.005226
Nuclear Periphery 0.001934 0.001637 0.003304 0.001807 0.001815 0.001821 0.001521 0.000675 0.001826 0.001727 0.002606 0.001649
Nuclear Periphery Foci 0.003999 0.001332 0.003392 0.000795 0.000455 0.000705 0.002053 0.000027 0.000785 0.001027 0.002868 0.000688
Nucleolus 0.006920 0.005651 0.001341 0.001060 0.001805 0.004197 0.001292 0.000124 0.002282 0.004944 0.001321 0.000929
Nucleus 0.453208 0.357200 0.814843 0.698805 0.455150 0.373456 0.784002 0.535878 0.454969 0.365106 0.802769 0.676102
Peroxisomes 0.009123 0.008454 0.000494 0.000254 0.001616 0.005862 0.000545 0.000005 0.002316 0.007194 0.000514 0.000219
Vacuole 0.028336 0.032312 0.072091 0.020898 0.011958 0.030657 0.046670 0.002022 0.013485 0.031507 0.062139 0.018267
Vacuole Periphery 0.002085 0.001610 0.000269 0.000306 0.000277 0.001533 0.000159 0.000020 0.000445 0.001572 0.000226 0.000266

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -0.91 -9.16 1.62 1.62 9.93 -4.14 -4.99 1.96 7.86 5.47 -2.64 -10.40 -2.53 1.74 9.84
Bud Neck 3.50 4.56 4.76 9.31 3.60 -6.20 7.39 4.28 8.99 -3.10 -3.35 5.74 6.16 12.66 1.36
Bud Site 2.99 3.31 3.19 1.18 -0.45 -4.90 -1.41 2.55 5.38 2.57 -2.20 1.20 0.07 1.68 -0.73
Cell Periphery 2.04 1.24 2.21 1.67 5.30 -5.82 -7.08 8.95 9.71 8.67 -2.55 -7.28 -0.08 2.90 7.72
Cytoplasm -5.52 9.94 1.74 13.95 -14.62 5.15 19.08 0.86 -0.96 -9.88 3.97 33.58 15.46 13.17 -14.99
Cytoplasmic Foci -3.32 8.79 7.56 24.58 -5.94 -9.55 8.55 24.07 27.98 4.89 -12.40 17.60 18.98 33.24 -0.78
Eisosomes 3.25 -1.39 7.00 11.23 8.70 -7.48 -6.39 20.04 18.53 8.59 -9.39 -9.86 4.58 13.28 11.19
Endoplasmic Reticulum 1.12 -9.87 0.11 -5.49 11.46 -4.23 -5.36 4.89 7.05 5.74 -3.08 -12.09 -6.66 -4.87 11.11
Endosome 0.16 2.98 4.33 9.44 2.68 -8.46 -2.11 7.90 12.28 5.12 -10.61 -2.01 2.46 12.43 3.80
Golgi -1.21 2.33 0.09 0.77 -0.88 -3.74 2.51 3.31 5.07 4.30 -4.38 2.78 -0.45 1.17 -0.89
Lipid Particles 0.36 1.97 2.99 11.54 4.02 -5.90 -0.42 10.47 13.98 5.99 -6.19 0.71 7.35 16.17 5.95
Mitochondria -1.01 2.56 2.87 7.44 6.62 -4.64 3.90 3.95 7.76 0.92 -4.88 3.88 4.27 10.56 4.60
Mitotic Spindle 0.58 1.00 0.76 0.50 -0.45 -3.67 3.13 2.97 5.23 -0.82 -3.25 1.18 -0.05 2.36 -0.88
None -3.61 4.33 0.97 5.05 -4.81 -2.70 6.53 -3.33 -1.42 -4.99 -6.67 7.57 -2.35 3.80 -6.13
Nuclear Periphery 0.51 -3.89 -0.44 -2.84 6.30 -0.08 -0.75 4.05 4.73 4.04 0.45 -5.73 -0.91 -1.85 5.74
Nuclear Periphery Foci 0.95 -0.90 1.04 0.50 1.70 -0.81 -1.70 3.24 5.22 1.89 -0.77 -2.32 -0.38 0.20 2.26
Nucleolus 0.36 3.35 3.32 8.16 -0.06 -3.99 1.42 6.07 8.15 3.98 -5.65 3.43 3.84 9.88 0.93
Nucleus 3.44 -9.46 -8.92 -27.41 2.75 8.37 -11.67 -4.81 -7.81 4.89 11.04 -18.14 -20.22 -29.28 4.11
Peroxisomes 0.20 3.69 3.82 9.74 2.92 -8.03 3.62 6.50 13.55 5.20 -8.18 5.46 6.73 14.45 4.62
Vacuole 0.25 -5.55 0.84 1.36 6.53 -10.00 -4.71 6.29 13.44 5.31 -11.74 -8.89 -4.43 2.53 7.55
Vacuole Periphery 0.53 2.09 2.12 3.53 0.46 -5.72 1.39 4.69 7.14 7.18 -4.82 1.83 1.78 5.97 0.35
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant
Localization
Cell Percentages cytoplasm (17%), nucleus (12%), mixed (52%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Sgs1

Sgs1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Sgs1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available