Standard name
Human Ortholog
Description Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0.09 0.2 0.21 0.22 0.15 0.23 0.15 0.21 0.29 0.23 0.23 0.26 0.12 0.05 0.05 0.07 0.12 0.13 0.05 0.12 0.1 0.08 0.08 0
Bud 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0.05
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.2 0.17 0.14 0.3 0.2 0.17 0.15 0.14 0.14 0.13 0.16 0.2 0.27 0.25 0.3 0.26 0.18 0.17 0.07 0.06 0 0.09 0.1 0.17
Endoplasmic Reticulum 0.48 0.4 0.38 0.38 0.48 0.39 0.35 0.29 0.23 0.23 0.25 0.24 0.47 0.51 0.5 0 0 0 0.31 0.25 0.21 0.35 0.43 0.4
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0.39 0.48 0.59 0.39 0.38 0.38 0.4 0.38 0.46 0.53 0.33 0.34 0.26 0.34 0.25 0.64 0.74 0.72 0.46 0.44 0.58 0.37 0.24 0.25
Mitochondria 0 0 0 0 0.06 0.28 0.23 0.23 0.28 0.17 0.31 0.33 0 0 0 0.14 0.15 0.19 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0.05 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0.05 0 0 0.06 0 0 0.05 0 0.06 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 13 41 37 43 43 64 54 61 96 102 74 120 21 9 11 10 15 15 8 31 19 12 13 5
Bud 3 3 4 1 4 8 13 12 13 14 15 10 2 1 0 2 3 3 1 3 0 3 1 9
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
Bud Site 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 – – – – – –
Cell Periphery 1 1 3 4 3 2 8 2 6 10 9 10 1 3 3 1 0 2 0 0 1 0 0 0
Cytoplasm 30 35 25 59 58 46 56 41 47 58 54 93 46 49 61 35 23 19 12 16 6 15 15 31
Endoplasmic Reticulum 71 83 67 76 139 106 129 87 76 105 83 109 80 100 103 5 5 4 56 63 44 57 71 74
Endosome 0 0 1 1 1 0 2 3 2 8 6 6 0 1 0 1 2 1 5 10 6 5 3 4
Golgi 58 98 105 78 110 104 149 111 152 236 108 155 44 66 52 87 96 81 83 110 119 61 39 45
Mitochondria 0 0 8 4 17 76 85 69 95 77 103 153 0 0 0 19 19 21 2 3 1 1 4 4
Nucleus 1 0 0 1 0 1 2 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0
Nucleolus 0 1 0 1 3 5 17 13 16 9 11 16 0 1 0 6 1 4 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1
Vac/Vac Membrane 1 1 0 0 2 1 14 10 8 22 8 6 11 5 6 7 4 7 5 7 1 3 5 4
Unique Cell Count 149 205 178 198 288 275 371 295 334 448 328 459 172 195 206 137 130 113 181 252 207 166 164 187
Labelled Cell Count 178 263 250 268 380 414 532 411 512 643 472 679 205 235 236 174 169 158 181 252 207 166 164 187


Early Golgi, Golgi

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 30.2 36.8 25.3 22.5 25.1 22.0 21.6 21.7 22.5 22.2 21.3 22.1 30.8 30.2 29.1 34.1 39.8 38.9 33.8 34.4 39.9
Std Deviation (1e-4) 6.1 5.9 4.4 5.0 4.8 5.3 5.0 5.8 5.4 5.3 5.9 5.8 5.1 5.3 5.4 14.2 14.1 14.7 7.3 10.9 12.5
Intensity Change (Log2) – – – -0.17 -0.01 -0.2 -0.23 -0.22 -0.17 -0.19 -0.25 -0.2 0.28 0.26 0.2 0.43 0.65 0.62 0.42 0.44 0.66

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP70002040WT3HU80HU120HU16002040WT3rpd3Δ_1rpd3Δ_2rpd3Δ_302040WT1AF100AF140AF18002040
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0.2 -1.6 0.6 -1.8 0 2.0 0.5 0.5 1.4 -2.2 -4.7 -4.6 -3.3 -2.1 -1.6
Bud 0 0 0 0.8 1.1 1.0 0.6 1.3 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 3.7 1.7 0.8 0.3 0 0 -0.4 0.7 1.8 3.0 2.7 3.6 2.6 0.9 0.6
Endoplasmic Reticulum 0.1 2.2 0.2 -0.7 -1.8 -3.6 -3.6 -2.9 -3.5 1.7 2.6 2.4 -7.1 -6.9 -6.6
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi -3.8 -4.4 -4.4 -4.1 -4.5 -2.9 -1.4 -5.7 -5.8 -6.3 -4.9 -6.7 0.8 2.7 2.2
Mitochondria -1.4 0.7 6.2 5.4 5.4 6.4 4.2 7.0 7.5 0 0 0 2.9 3.1 3.9
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 2.9 0 3.0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 0 0 3.0 0 0 3.4 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 21.4275 23.6301 23.4545 22.8066 21.3369 23.4067 19.3985 24.2837 23.3062 21.7216 22.1003 22.0208 21.8191 28.5529 24.8278 26.1396 22.6135 27.5803
Actin 0.0242 0.0107 0.007 0.0101 0.0007 0.0119 0.0246 0.0139 0.0124 0.0023 0.0036 0.0035 0.0276 0.0127 0.0175 0.0085 0.0019 0.0094
Bud 0.0002 0.0006 0.0001 0.0002 0.0003 0.0001 0.0003 0.0009 0.0007 0.0006 0.0001 0.0001 0.0007 0.0005 0.0003 0.0004 0 0.0001
Bud Neck 0.0005 0.0004 0.0002 0.0003 0.0002 0.0004 0.0004 0.0005 0.0004 0.0015 0.0002 0.0003 0.0009 0.0011 0.0009 0.0004 0.0001 0.0006
Bud Periphery 0.0002 0.0002 0.0001 0.0002 0.0001 0.0001 0.0003 0.0004 0.0008 0.0017 0.0002 0.0001 0.0008 0.0005 0.0003 0.0006 0.0001 0.0001
Bud Site 0.0003 0.0022 0.0002 0.0001 0.0001 0.0001 0.001 0.0012 0.001 0.0026 0.0001 0.0001 0.0028 0.0027 0.0006 0.0004 0 0.0001
Cell Periphery 0.0004 0.0004 0.0003 0.0005 0.0002 0.0002 0.0002 0.0002 0.0004 0.0007 0.0005 0.0001 0.0006 0.0021 0.0014 0.007 0.0009 0.0003
Cytoplasm 0.0107 0.0378 0.0201 0.0223 0.0196 0.0154 0.0067 0.019 0.0118 0.0062 0.0051 0.0068 0.0151 0.0171 0.0165 0.0072 0.0025 0.0079
Cytoplasmic Foci 0.0526 0.0912 0.0557 0.0467 0.036 0.0331 0.051 0.0741 0.0478 0.0399 0.0344 0.0353 0.0349 0.0505 0.0362 0.0252 0.0324 0.0296
Eisosomes 0.0002 0 0 0 0 0.0001 0.0003 0 0.0001 0 0.0001 0 0.0002 0.0002 0.0003 0 0.0001 0.0001
Endoplasmic Reticulum 0.0258 0.0171 0.0043 0.0642 0.0193 0.0212 0.0306 0.017 0.0194 0.0055 0.0444 0.0136 0.0214 0.0318 0.039 0.0776 0.0076 0.02
Endosome 0.2448 0.2576 0.1986 0.2704 0.3291 0.166 0.2669 0.2804 0.2495 0.292 0.2732 0.173 0.1849 0.1708 0.1899 0.281 0.1946 0.144
Golgi 0.6016 0.5367 0.6635 0.5241 0.5039 0.7266 0.525 0.5525 0.619 0.576 0.5364 0.7449 0.6448 0.6605 0.6411 0.4902 0.6473 0.7542
Lipid Particles 0.0153 0.0316 0.0305 0.0285 0.0206 0.0125 0.0326 0.0308 0.0087 0.0291 0.0089 0.0101 0.0268 0.0299 0.0271 0.054 0.0945 0.0217
Mitochondria 0.0123 0.0038 0.0101 0.01 0.0038 0.0032 0.0417 0.0025 0.0075 0.0089 0.0458 0.0046 0.0205 0.0098 0.0055 0.0072 0.0026 0.0039
None 0.0001 0.0001 0.0003 0.0001 0.0001 0.0001 0.0008 0.0001 0.0011 0.0003 0.0002 0.0002 0.0003 0.0001 0.0001 0.0001 0.0008 0.0001
Nuclear Periphery 0.0036 0.0006 0.001 0.0022 0.0181 0.0036 0.004 0.0005 0.0033 0.0033 0.0042 0.002 0.0037 0.0006 0.003 0.0026 0.0024 0.0011
Nucleolus 0 0 0.0001 0 0 0 0.0001 0 0.0001 0.0043 0 0 0.0002 0.0002 0.0001 0.0002 0.0001 0
Nucleus 0.0002 0.0001 0.0002 0.0001 0.0003 0.0003 0.0003 0.0001 0.0008 0.0042 0.0002 0.0002 0.0003 0.0003 0.0007 0.0004 0.0001 0.0001
Peroxisomes 0.0007 0.001 0.0004 0.0003 0.0002 0.0002 0.0033 0.0005 0.0031 0.0005 0.0002 0.0011 0.0012 0.0007 0.0007 0.0002 0.0031 0.0002
Punctate Nuclear 0.0002 0.0002 0.0002 0.0001 0.0003 0.0002 0.0008 0.0001 0.0015 0.0014 0.0001 0.0004 0.0004 0.0002 0.0002 0.0002 0.0015 0.0001
Vacuole 0.0029 0.005 0.0039 0.0098 0.0327 0.0018 0.0044 0.0028 0.0057 0.0122 0.0264 0.0016 0.0055 0.0057 0.0114 0.0262 0.0033 0.0025
Vacuole Periphery 0.0033 0.0026 0.0032 0.0098 0.0144 0.0029 0.0048 0.0026 0.0049 0.0066 0.0158 0.0021 0.0063 0.0023 0.0072 0.0104 0.004 0.0038

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 125.7175 102.167 77.1907 75.2351 72.743 53.9974 111.7529 89.3699 65.8399 91.8051
Translational Efficiency 1.3859 1.7804 1.6138 1.2391 1.739 3.2194 1.5756 1.5466 1.7775 1.646

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1569 1326 284 1164 1136 1599 1495 1609 2705 2925 1779 2773

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1891.56 1842.84 3736.93 3504.78 1612.91 1849.11 3417.43 3297.97 1774.54 1846.27 3468.44 3384.78
Standard Deviation 410.89 420.49 542.81 679.97 360.11 382.81 514.76 799.17 413.89 400.34 532.36 758.34
Intensity Change Log 2 — -0.037646 0.982277 0.889747 — 0.197165 1.083246 1.031912 — 0.075187 1.029626 0.956922

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.002598 0.002184 0.013625 0.002324 0.001935 0.004950 0.001776 0.003076 0.002320 0.003696 0.003667 0.002760
Bud Neck 0.001137 0.000836 0.019905 0.002676 0.000664 0.000963 0.002092 0.002010 0.000938 0.000906 0.004935 0.002290
Bud Site 0.009610 0.003228 0.005972 0.014161 0.003910 0.005088 0.005753 0.018439 0.007216 0.004245 0.005788 0.016643
Cell Periphery 0.005766 0.001152 0.008125 0.054775 0.001875 0.002287 0.004687 0.031247 0.004132 0.001773 0.005235 0.041123
Cytoplasm 0.005184 0.001038 0.000137 0.014031 0.001315 0.001797 0.002148 0.016119 0.003559 0.001453 0.001827 0.015243
Cytoplasmic Foci 0.065066 0.053369 0.008224 0.032833 0.060526 0.072413 0.046137 0.071136 0.063159 0.063780 0.040085 0.055058
Eisosomes 0.000130 0.000086 0.000851 0.000286 0.000124 0.000353 0.000168 0.000326 0.000127 0.000232 0.000277 0.000309
Endoplasmic Reticulum 0.279173 0.047418 0.043856 0.105758 0.118328 0.132903 0.082687 0.088430 0.211624 0.094150 0.076488 0.095704
Endosome 0.062873 0.081040 0.033488 0.025485 0.078968 0.102218 0.068994 0.042997 0.069632 0.092617 0.063326 0.035646
Golgi 0.430404 0.650711 0.444811 0.198888 0.603930 0.543960 0.463074 0.222878 0.503279 0.592354 0.460158 0.212808
Lipid Particles 0.060965 0.107812 0.241209 0.435230 0.074344 0.100119 0.240315 0.411041 0.066584 0.103606 0.240457 0.421194
Mitochondria 0.001058 0.000650 0.000749 0.001287 0.000324 0.001395 0.000580 0.002351 0.000750 0.001058 0.000607 0.001904
Mitotic Spindle 0.000850 0.000304 0.000955 0.001703 0.000321 0.000412 0.001641 0.000952 0.000628 0.000363 0.001532 0.001267
None 0.000662 0.000384 0.000137 0.000651 0.000205 0.000304 0.000229 0.000658 0.000470 0.000341 0.000214 0.000655
Nuclear Periphery 0.000608 0.000282 0.004986 0.001285 0.000304 0.000186 0.000738 0.000555 0.000481 0.000230 0.001416 0.000862
Nuclear Periphery Foci 0.011438 0.005611 0.013687 0.009154 0.008864 0.003683 0.008094 0.005895 0.010357 0.004557 0.008987 0.007263
Nucleolus 0.000033 0.000495 0.000077 0.000026 0.000048 0.000056 0.000009 0.000092 0.000039 0.000255 0.000020 0.000065
Nucleus 0.000263 0.000722 0.000111 0.000301 0.000133 0.000349 0.000065 0.000380 0.000208 0.000518 0.000072 0.000347
Peroxisomes 0.000087 0.000102 0.000082 0.000668 0.000104 0.000209 0.000149 0.003183 0.000094 0.000161 0.000139 0.002127
Vacuole 0.028743 0.027175 0.125599 0.081736 0.024468 0.015338 0.056383 0.060950 0.026948 0.020704 0.067432 0.069675
Vacuole Periphery 0.033350 0.015399 0.033415 0.016741 0.019311 0.011015 0.014282 0.017284 0.027454 0.013003 0.017337 0.017056

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 0.58 -2.55 0.22 -0.29 2.59 -3.35 0.20 -1.82 2.02 -2.43 -2.29 -1.64 -0.95 1.44 1.02
Bud Neck 1.50 -6.27 -5.65 -6.29 5.69 -1.98 -5.62 -6.84 -4.64 0.29 0.15 -7.34 -8.18 -7.73 4.62
Bud Site 5.62 2.57 -3.26 -7.54 -5.17 -1.68 -2.31 -9.38 -8.43 -7.45 4.09 1.31 -8.30 -11.28 -8.84
Cell Periphery 13.26 -2.07 -15.69 -17.27 -14.07 -1.39 -8.37 -15.16 -14.82 -13.54 9.16 -2.98 -21.20 -22.62 -20.33
Cytoplasm 4.46 5.55 -4.75 -7.72 -8.29 -1.09 -1.54 -10.16 -9.60 -9.05 3.60 2.39 -9.66 -12.36 -11.33
Cytoplasmic Foci 3.35 19.13 8.91 6.24 -9.04 -3.29 4.17 -2.44 0.39 -6.11 -0.25 8.37 2.83 3.18 -5.01
Eisosomes 2.68 -4.62 -5.27 -7.62 3.60 -2.02 -2.10 -8.51 0.24 -6.13 -1.67 -4.88 -9.70 -1.20 -0.93
Endoplasmic Reticulum 29.43 25.31 19.82 -10.03 -8.09 -1.86 5.04 4.39 7.20 -1.02 19.40 21.97 19.71 -0.23 -4.17
Endosome -6.33 10.58 20.50 21.67 3.22 -7.12 3.26 13.26 23.78 11.77 -10.78 2.97 21.24 31.37 15.19
Golgi -21.19 -0.54 23.01 45.90 12.23 5.60 12.85 37.67 35.22 24.90 -11.53 5.01 39.81 56.12 29.60
Lipid Particles -8.11 -12.35 -39.89 -31.64 -11.35 -4.69 -21.72 -39.45 -36.39 -16.82 -9.54 -27.16 -56.91 -48.06 -21.44
Mitochondria 1.75 1.08 -0.37 -1.02 -0.83 -1.95 -1.19 -7.14 -1.58 -5.09 -0.94 0.71 -3.63 -1.99 -3.72
Mitotic Spindle 5.90 -0.69 -2.80 -4.46 -2.07 -0.74 -3.20 -4.66 -3.27 1.70 3.02 -2.69 -4.26 -5.59 0.86
None 1.63 4.86 0.01 -1.14 -2.62 -1.00 -0.33 -3.74 -2.34 -3.00 1.21 2.64 -1.55 -2.39 -3.47
Nuclear Periphery 6.51 -4.42 -7.71 -11.81 3.75 2.98 -6.28 -4.62 -8.18 2.59 7.83 -5.47 -7.69 -14.05 3.28
Nuclear Periphery Foci 6.52 -0.94 2.60 -4.91 1.72 3.66 0.36 1.96 -4.31 3.16 7.54 1.17 3.85 -6.28 2.49
Nucleolus -1.57 -1.86 0.47 1.60 2.58 -0.32 1.86 -1.12 -0.70 -2.34 -1.62 1.50 -1.09 1.41 -2.12
Nucleus -1.05 2.10 -0.78 0.92 -5.19 -0.96 1.19 -2.43 -0.15 -3.44 -1.33 2.86 -2.16 0.67 -5.02
Peroxisomes -0.51 0.17 -5.12 -4.88 -5.10 -2.18 -1.17 -8.88 -8.51 -8.71 -2.23 -1.38 -9.77 -9.37 -9.47
Vacuole 0.73 -9.85 -14.23 -14.53 4.21 4.98 -11.38 -12.12 -16.09 -1.32 4.38 -14.38 -18.14 -21.33 -0.73
Vacuole Periphery 10.21 -0.01 9.53 -1.00 5.25 5.60 3.60 1.26 -5.48 -2.93 12.25 8.25 8.60 -4.64 0.28
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p
Localization
Cell Percentages ER (22%), cytoplasm (1%), mixed (46%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Yip3

Yip3


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Yip3-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available