Standard name
Human Ortholog
Description Dihydrolipoamide acetyltransferase component (E2) of the PDC; the pyruvate dehydrogenase complex (PDC) catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0.06 0 0.06 0 0.05
Bud 0 0 0 0 0 0 0 0 0.1 0.06 0.05 0.09 0 0.05 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0.06 0.05 0 0 0 0 0
Bud Site 0 0.1 0 0 0 0 0 0 0 0.06
Cell Periphery 0 0 0 0 0 0 0 0 0.05 0.12 0 0 0 0 0 0
Cytoplasm 0.11 0.05 0.18 0.11 0.17 0.12 0.05 0 0.05 0.06 0.09 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0.06 0 0
Endosome 0 0 0 0 0 0 0 0.16 0.2 0.12 0.09 0.09 0.14 0 0 0.05
Golgi 0 0 0 0 0 0 0 0.24 0.3 0 0 0.1 0.1 0.06 0.14 0.19
Mitochondria 0.78 0.9 0.77 0.83 0.67 0.85 0.88 0.52 0.05 0.12 0.5 0.62 0.64 0.53 0.54 0.55
Nucleus 0 0 0 0 0.06 0 0 0 0 0.06 0 0 0 0 0 0
Nuclear Periphery 0 0.05 0.1 0.12 0.19 0.1 0.07 0 0 0 0.1 0 0 0 0 0
Nucleolus 0.17 0.1 0.12 0.15 0.24 0.1 0.14 0 0.05 0.12 0 0 0 0 0 0
Peroxisomes 0 0.08 0 0 0 0 0 0.08 0.2 0.29 0 0 0.08 0.07 0.09 0.06
SpindlePole 0 0.05 0 0 0 0 0 0.08 0.05 0.06 0 0.05 0 0 0 0
Vac/Vac Membrane 0 0.05 0 0 0 0 0 0.16 0.1 0.06 0.05 0 0 0 0.07 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 4
Bud 0 1 1 2 1 1 1 0 2 1 0 1 0 1 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
Bud Site 0 4 1 0 1 0 1 0 0 1
Cell Periphery 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0
Cytoplasm 5 2 17 12 9 7 3 0 1 1 0 0 0 0 0 1
Endoplasmic Reticulum 0 0 2 0 0 1 1 0 1 0 0 0 0 1 0 1
Endosome 2 0 0 0 0 0 0 4 4 2 0 1 5 0 1 4
Golgi 1 0 0 0 0 0 1 6 6 0 0 1 3 1 9 16
Mitochondria 36 35 75 87 36 51 49 13 1 2 5 9 23 15 33 47
Nucleus 0 1 0 3 3 0 2 1 0 1 0 0 0 0 1 0
Nuclear Periphery 0 2 10 13 10 6 4 0 0 0 0 0 0 1 0 0
Nucleolus 8 4 12 16 13 6 8 1 1 2 0 0 0 0 1 0
Peroxisomes 2 3 1 0 0 1 1 2 4 5 0 0 3 1 5 5
SpindlePole 1 2 2 0 0 1 1 2 1 1 0 0 0 0 0 0
Vac/Vac Membrane 0 2 2 4 1 0 0 4 2 1 0 0 0 0 4 1
Unique Cell Count 46 39 97 105 54 60 56 25 20 17 10 15 37 30 63 87
Labelled Cell Count 55 57 123 138 74 74 72 33 24 20 10 15 37 30 63 87


Mitochondria

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 6.9 6.0 6.2 6.0 6.5 7.2 7.6 10.0 8.5 7.8 15.5 15.2
Std Deviation (1e-4) 3.0 1.5 2.5 1.8 1.8 2.6 2.5 2.3 2.1 2.4 9.5 6.1
Intensity Change (Log2)


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration
Actin 0.0264 0.003 0.0113 0.0007 0.0056 0.0119 0.2453 0.0008 0.0064 0.0115 0.0001 0.0005
Bud 0.0004 0.0008 0.0001 0 0 0.0004 0.0003 0 0.0054 0.0004 0 0
Bud Neck 0.0006 0.0001 0.0001 0.0001 0 0.0001 0.0003 0 0.0003 0.0003 0 0
Bud Periphery 0.0007 0.0009 0.0002 0.0001 0.0001 0.0008 0.0006 0.0002 0.0104 0.0003 0 0
Bud Site 0.0011 0.0017 0.0005 0.0001 0.0001 0.0004 0.0011 0 0.0053 0.0024 0 0
Cell Periphery 0.0003 0.0004 0.0002 0.0001 0 0.0001 0.0003 0.0001 0.0007 0.0001 0 0
Cytoplasm 0.0019 0 0.0012 0 0.0024 0.0001 0.0004 0 0.0004 0.0004 0 0
Cytoplasmic Foci 0.0147 0.0014 0.0109 0.0011 0.0028 0.0007 0.0084 0.0004 0.0188 0.0355 0 0.0002
Eisosomes 0.0005 0.0004 0.0007 0.0001 0.0001 0.0001 0.001 0.0001 0.0002 0.0001 0.0001 0.0001
Endoplasmic Reticulum 0.0035 0.0001 0.0004 0 0.0051 0.0003 0.0023 0 0.0002 0.0001 0 0
Endosome 0.0266 0.0023 0.0077 0.0029 0.0483 0.0046 0.0055 0.0003 0.0189 0.0079 0 0.0004
Golgi 0.0183 0.0061 0.0257 0.0049 0.0064 0.011 0.0143 0.0007 0.0306 0.021 0.0002 0.0029
Lipid Particles 0.0256 0.0229 0.0243 0.0094 0.007 0.0018 0.0761 0.0072 0.0171 0.0139 0 0.0115
Mitochondria 0.8329 0.9311 0.8978 0.9727 0.8784 0.9652 0.3758 0.9646 0.8104 0.897 0.9994 0.9814
None 0.0021 0 0.0018 0 0.0029 0 0.0011 0 0.0007 0.0001 0 0
Nuclear Periphery 0.016 0.0001 0.0002 0 0.0265 0.0001 0.1659 0 0.0005 0.0001 0 0
Nucleolus 0.0006 0.0014 0.0007 0.0001 0.0001 0 0.0069 0.0002 0.002 0.0003 0 0
Nucleus 0.0044 0.0003 0.0002 0.0001 0.0013 0 0.0096 0.0001 0.0007 0.0002 0 0
Peroxisomes 0.0094 0.0135 0.0112 0.0042 0.007 0.0005 0.0362 0.0194 0.0559 0.0068 0.0002 0.0021
Punctate Nuclear 0.0011 0 0.0008 0 0.0022 0 0.0048 0 0.0111 0.0009 0 0
Vacuole 0.0061 0.0051 0.0011 0.0007 0.0008 0.0003 0.0032 0.0011 0.0023 0.0003 0 0.0001
Vacuole Periphery 0.0068 0.0084 0.0029 0.0028 0.0028 0.0014 0.0407 0.0046 0.0017 0.0004 0 0.0007

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 214.7412 214.4296 197.5059 217.7601 178.7031 231.3659 231.0914 233.6664 250.6124 231.6136
Translational Efficiency 1.6756 1.6399 1.8199 1.6765 1.9909 1.5516 1.4601 1.7213 1.6032 1.595

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1110 451 1985 348 1361 748 2405 258 2471 1199 4390 606

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 751.42 998.15 1138.74 1729.54 866.77 898.74 1453.72 2000.88 814.95 936.13 1311.30 1845.06
Standard Deviation 113.65 209.01 178.33 356.13 166.25 169.16 299.70 458.64 155.94 191.32 296.92 424.72
Intensity Change Log 2 0.409637 0.599747 1.202697 0.052255 0.746028 1.206914 0.229255 0.679941 1.204957

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000775 0.008136 0.006203 0.016177 0.001927 0.005921 0.005696 0.025225 0.001409 0.006754 0.005925 0.020029
Bud Neck 0.013573 0.020807 0.001210 0.005559 0.002579 0.016547 0.000314 0.004558 0.007518 0.018149 0.000719 0.005133
Bud Site 0.015964 0.046057 0.005752 0.004981 0.005636 0.034187 0.000430 0.004714 0.010275 0.038651 0.002837 0.004868
Cell Periphery 0.000516 0.000591 0.000206 0.000523 0.001064 0.001547 0.000082 0.000629 0.000818 0.001188 0.000138 0.000568
Cytoplasm 0.008163 0.007245 0.001578 0.000399 0.001261 0.005868 0.000172 0.000349 0.004361 0.006386 0.000808 0.000378
Cytoplasmic Foci 0.057313 0.059572 0.040349 0.020334 0.023898 0.039690 0.008903 0.017347 0.038909 0.047168 0.023121 0.019062
Eisosomes 0.000093 0.000151 0.000081 0.000899 0.000094 0.000145 0.000278 0.003619 0.000094 0.000147 0.000189 0.002057
Endoplasmic Reticulum 0.000629 0.000875 0.000769 0.004279 0.000379 0.000707 0.000156 0.003214 0.000491 0.000770 0.000433 0.003825
Endosome 0.127599 0.139071 0.035788 0.016311 0.047435 0.112669 0.004676 0.014588 0.083446 0.122600 0.018744 0.015578
Golgi 0.077027 0.068746 0.116101* 0.277455* 0.030824 0.050770 0.057957 0.290739* 0.051579 0.057531 0.084248 0.283111*
Lipid Particles 0.016231 0.006078 0.003200 0.018666 0.014204 0.010973 0.001690 0.005682 0.015114 0.009132 0.002373 0.013138
Mitochondria 0.533547* 0.462149* 0.704030* 0.545178* 0.809354* 0.568685* 0.902514* 0.550691* 0.685459* 0.528612* 0.812767* 0.547525*
Mitotic Spindle 0.019500 0.035609 0.019469 0.007417 0.004197 0.017536 0.000888 0.002365 0.011071 0.024334 0.009290 0.005266
None 0.001825 0.000952 0.000501 0.004308 0.000403 0.000521 0.001087 0.004858 0.001042 0.000683 0.000822 0.004542
Nuclear Periphery 0.000317 0.000756 0.001979 0.002787 0.000250 0.000277 0.000314 0.001236 0.000280 0.000457 0.001067 0.002127
Nuclear Periphery Foci 0.000883 0.001538 0.001143 0.001664 0.000569 0.000725 0.000147 0.000599 0.000710 0.001031 0.000597 0.001211
Nucleolus 0.001942 0.002716 0.000075 0.000280 0.000819 0.003469 0.000032 0.000468 0.001324 0.003185 0.000051 0.000360
Nucleus 0.003364 0.002975 0.000069 0.000197 0.000779 0.004303 0.000010 0.000331 0.001940 0.003804 0.000037 0.000254
Peroxisomes 0.083560 0.087066 0.007076 0.002571 0.041167 0.077221 0.002526 0.008150 0.060210 0.080924 0.004584 0.004946
Vacuole 0.021248 0.034850 0.020479 0.021723 0.007041 0.034274 0.002894 0.020006 0.013423 0.034491 0.010845 0.020992
Vacuole Periphery 0.015931 0.014062 0.033942 0.048293 0.006120 0.013966 0.009234 0.040630 0.010527 0.014002 0.020406 0.045030

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -2.77 -6.64 -4.58 -1.86 -2.88 -2.47 -3.58 -4.99 -3.96 -4.14 -3.80 -6.59 -6.70 -4.30 -4.98
Bud Neck -2.35 7.78 3.70 5.02 -2.93 -7.40 5.65 -1.54 5.17 -3.29 -6.25 8.99 1.82 7.04 -4.38
Bud Site -5.48 5.36 3.39 7.01 0.01 -7.57 5.18 0.21 6.88 -2.19 -9.00 7.26 2.46 9.67 -1.57
Cell Periphery -0.80 5.15 -0.05 0.52 -2.46 -0.52 1.47 0.65 1.39 -5.70 -0.68 1.84 0.66 1.49 -5.11
Cytoplasm 0.13 4.98 5.98 4.29 2.70 -3.31 4.57 3.42 3.97 -1.92 -1.87 5.79 6.53 5.72 1.89
Cytoplasmic Foci -0.42 4.79 9.38 7.33 6.19 -4.72 8.58 1.77 5.16 -2.75 -2.75 8.25 7.66 8.64 1.79
Eisosomes -5.22 2.15 -7.78 -7.19 -7.90 -2.96 -6.39 -3.11 -3.06 -2.95 -4.97 -5.92 -4.02 -3.91 -3.82
Endoplasmic Reticulum -1.57 -1.17 -3.10 -2.87 -2.98 -4.00 4.35 -6.18 -5.42 -6.70 -3.51 0.94 -4.75 -4.33 -4.83
Endosome -1.11 16.95 20.10 14.18 7.84 -9.47 13.84 7.99 14.50 -3.57 -6.69 20.98 20.01 20.35 1.75
Golgi 1.32 -6.87 -11.98 -12.23 -9.59 -4.94 -7.41 -13.63 -12.45 -12.12 -1.61 -9.84 -18.49 -17.79 -15.77
Lipid Particles 4.52 6.45 -0.62 -3.56 -4.56 1.18 6.78 4.07 2.43 -3.89 3.19 9.35 0.83 -1.66 -5.37
Mitochondria 3.43 -12.63 -0.52 -3.14 7.41 14.84 -10.12 10.95 0.68 15.57* 11.81 -14.96 8.33 -1.06 17.10*
Mitotic Spindle -3.17 -0.04 3.26 5.05 3.46 -6.01 4.68 1.38 6.31 -1.32 -5.46 1.32 2.77 6.67 2.02
None 0.82 2.31 -3.48 -4.55 -9.33 -1.88 -10.42 -8.20 -7.97 -6.94 0.82 0.86 -8.31 -9.66 -11.29
Nuclear Periphery -0.81 -3.23 -5.37 -2.96 -1.22 -0.39 -0.62 -5.03 -4.88 -4.36 -0.84 -3.29 -6.71 -4.99 -3.00
Nuclear Periphery Foci -0.92 -0.83 -2.20 -0.15 -1.42 -0.71 2.09 -0.13 0.94 -4.24 -1.07 0.65 -2.24 -0.55 -3.05
Nucleolus -0.65 4.45 3.96 2.43 -2.47 -2.60 2.65 0.79 2.92 -1.37 -2.39 5.12 3.47 3.88 -2.12
Nucleus 0.20 3.58 3.43 3.33 -1.47 -2.63 2.91 1.21 2.93 -1.30 -1.99 4.31 3.70 3.95 -1.87
Peroxisomes -0.39 15.32 15.86 10.74 2.82 -5.58 11.96 6.38 9.98 -1.60 -3.86 19.22 16.13 15.38 -0.32
Vacuole -3.45 0.33 -0.15 2.69 -0.36 -8.20 4.84 -2.60 2.24 -3.43 -8.16 2.37 -2.58 3.49 -3.49
Vacuole Periphery 0.90 -7.93 -6.72 -7.05 -2.89 -4.91 -3.63 -6.38 -4.77 -5.79 -2.66 -8.62 -9.66 -8.45 -6.80
Standard name
Human Ortholog
Description Dihydrolipoamide acetyltransferase component (E2) of the PDC; the pyruvate dehydrogenase complex (PDC) catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA
Localization
Cell Percentages mitochondrion (90%)
Cell Cycle Regulation No
Subcompartmental Group mito-2

Lat1

Lat1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Lat1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available