Standard name | |
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Human Ortholog | |
Description | Protein with role in regulation of MBF-specific transcription at Start; phosphorylated by Cln-Cdc28p kinases in vitro; unphosphorylated form binds Swi6p, which is required for Stb1p function; expression is cell-cycle regulated; STB1 has a paralog, YOL131W, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 |
Bud | 3 | 0 | 2 | 1 | 3 | 2 | 5 | 4 | 8 | 4 | 5 | 7 | 2 | 2 | 2 | 0 | 0 | 0 | 18 | 14 | 7 | 15 | 4 | 12 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 0 | 5 |
Bud Site | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 3 | 4 | 8 | 7 | 6 | 0 | 0 | 0 | 1 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 1 | 2 | 0 | 4 | 1 | 5 | 1 | 4 | 3 | 0 | 0 | 2 | 3 | 7 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 113 | 74 | 70 | 86 | 193 | 89 | 100 | 125 | 64 | 80 | 47 | 71 | 266 | 281 | 344 | 212 | 137 | 72 | 82 | 50 | 54 | 21 | 6 | 4 |
Endoplasmic Reticulum | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 1 | 1 | 1 | 2 | 2 | 20 | 10 | 6 | 0 | 1 | 2 | 1 | 2 | 2 |
Endosome | 1 | 0 | 1 | 0 | 2 | 0 | 9 | 7 | 0 | 0 | 0 | 0 | 4 | 48 | 21 | 9 | 4 | 2 | 3 | 1 | 7 | 3 | 12 | 17 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 8 | 3 |
Mitochondria | 61 | 23 | 19 | 32 | 39 | 138 | 176 | 217 | 182 | 272 | 209 | 325 | 12 | 17 | 11 | 25 | 10 | 5 | 3 | 0 | 4 | 2 | 6 | 8 |
Nucleus | 130 | 65 | 53 | 76 | 62 | 103 | 139 | 183 | 164 | 188 | 174 | 215 | 169 | 240 | 234 | 191 | 104 | 54 | 104 | 64 | 38 | 284 | 345 | 365 |
Nuclear Periphery | 3 | 0 | 0 | 1 | 2 | 1 | 10 | 6 | 4 | 9 | 5 | 10 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 4 |
Nucleolus | 29 | 2 | 5 | 2 | 9 | 19 | 38 | 36 | 44 | 64 | 54 | 74 | 11 | 16 | 6 | 14 | 4 | 8 | 27 | 11 | 10 | 41 | 91 | 84 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 2 | 1 | 5 | 4 | 2 | 0 | 1 | 2 | 3 | 4 | 2 | 3 | 6 | 1 | 13 | 12 | 10 | 16 | 17 | 27 |
Vac/Vac Membrane | 5 | 8 | 2 | 3 | 10 | 9 | 13 | 18 | 7 | 17 | 14 | 14 | 22 | 143 | 95 | 8 | 12 | 6 | 8 | 9 | 9 | 12 | 43 | 81 |
Unique Cell Count | 266 | 157 | 136 | 171 | 292 | 266 | 359 | 458 | 339 | 443 | 356 | 477 | 468 | 687 | 672 | 429 | 260 | 138 | 270 | 170 | 152 | 408 | 549 | 634 |
Labelled Cell Count | 345 | 174 | 152 | 202 | 325 | 363 | 505 | 605 | 487 | 644 | 522 | 730 | 493 | 753 | 719 | 487 | 295 | 157 | 270 | 170 | 152 | 408 | 549 | 634 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.7 | 5.2 | 5.0 | 4.8 | 5.0 | 4.5 | 4.2 | 4.5 | 4.5 | 4.3 | 4.4 | 4.2 | 5.6 | 5.6 | 5.5 | 6.6 | 7.5 | 8.7 | 5.3 | 5.4 | 5.8 |
Std Deviation (1e-4) | 0.6 | 1.0 | 1.1 | 1.2 | 1.3 | 1.1 | 1.1 | 1.3 | 1.1 | 1.3 | 1.0 | 1.1 | 0.9 | 1.2 | 1.1 | 1.3 | 1.2 | 1.6 | 1.1 | 1.6 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.07 | 0.0 | -0.17 | -0.27 | -0.15 | -0.15 | -0.23 | -0.2 | -0.25 | 0.15 | 0.16 | 0.12 | 0.39 | 0.57 | 0.79 | 0.07 | 0.11 | 0.21 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.2 | 2.9 | -3.5 | -4.9 | -5.3 | -7.1 | -7.8 | -8.9 | -8.9 | 1.1 | -2.3 | -0.1 | -0.4 | 0.2 | 0.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.8 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | -0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -5.3 | -6.0 | -6.9 | -3.1 | -3.7 | -3.0 |
Nucleus | 1.0 | -3.9 | 0 | -0.1 | 0.2 | 1.9 | 0.7 | 2.0 | 1.3 | -0.6 | -0.9 | -0.9 | 1.1 | 0.2 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.8 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.7 | 5.4 | 4.1 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.6639 | 1.7993 | 1.7942 | 1.6903 | 1.2551 | 1.7328 | 1.2113 | 1.4254 | 1.4883 | 1.3646 | 1.5575 | 1.2533 | 3.261 | 3.1011 | 3.192 | 3.1456 | 3.0615 | 3.0736 |
Actin | 0.0085 | 0.0022 | 0.0052 | 0.0006 | 0.0019 | 0.0035 | 0.0417 | 0.0028 | 0.0063 | 0.0044 | 0.0181 | 0.0074 | 0.0342 | 0.0017 | 0.0161 | 0.0073 | 0.0208 | 0.0114 |
Bud | 0.0013 | 0.0273 | 0.0354 | 0.0107 | 0.0169 | 0.0088 | 0.0005 | 0.0331 | 0.0311 | 0.0194 | 0.0384 | 0.0095 | 0.0011 | 0.043 | 0.0361 | 0.0525 | 0.0074 | 0.0117 |
Bud Neck | 0.0025 | 0.0054 | 0.0094 | 0.0055 | 0.01 | 0.017 | 0.0013 | 0.0029 | 0.0172 | 0.0054 | 0.0055 | 0.0144 | 0.0103 | 0.004 | 0.0046 | 0.0083 | 0.0067 | 0.019 |
Bud Periphery | 0.0013 | 0.0169 | 0.0274 | 0.0098 | 0.0292 | 0.0128 | 0.001 | 0.0242 | 0.0309 | 0.0179 | 0.0309 | 0.0123 | 0.0026 | 0.0284 | 0.0341 | 0.0654 | 0.0105 | 0.0136 |
Bud Site | 0.0054 | 0.0584 | 0.0524 | 0.009 | 0.0091 | 0.0045 | 0.0021 | 0.0605 | 0.0373 | 0.0078 | 0.0072 | 0.0041 | 0.003 | 0.0998 | 0.0495 | 0.0231 | 0.004 | 0.0041 |
Cell Periphery | 0.0002 | 0.0016 | 0.002 | 0.0009 | 0.0006 | 0.0004 | 0.0002 | 0.002 | 0.0022 | 0.0012 | 0.001 | 0.0004 | 0.0002 | 0.0026 | 0.0017 | 0.0021 | 0.0008 | 0.0005 |
Cytoplasm | 0.0381 | 0.3042 | 0.4385 | 0.4725 | 0.3809 | 0.0623 | 0.0466 | 0.3293 | 0.4501 | 0.4712 | 0.3959 | 0.0938 | 0.0224 | 0.3945 | 0.5471 | 0.5658 | 0.4865 | 0.0842 |
Cytoplasmic Foci | 0.0058 | 0.0052 | 0.0106 | 0.019 | 0.0109 | 0.0022 | 0.0234 | 0.0088 | 0.014 | 0.0151 | 0.0191 | 0.0056 | 0.0107 | 0.0111 | 0.0113 | 0.0144 | 0.0111 | 0.0038 |
Eisosomes | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0005 | 0.0001 | 0.0006 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0017 | 0.0001 |
Endoplasmic Reticulum | 0.0014 | 0.0046 | 0.007 | 0.0062 | 0.0077 | 0.0009 | 0.0034 | 0.0047 | 0.0061 | 0.0069 | 0.0083 | 0.002 | 0.0016 | 0.0075 | 0.0065 | 0.0066 | 0.0062 | 0.0011 |
Endosome | 0.0039 | 0.0044 | 0.0151 | 0.0266 | 0.0205 | 0.0011 | 0.024 | 0.0085 | 0.0085 | 0.0443 | 0.0319 | 0.0094 | 0.0124 | 0.0075 | 0.0088 | 0.0146 | 0.0091 | 0.0034 |
Golgi | 0.0007 | 0.0004 | 0.0014 | 0.0008 | 0.0004 | 0.0003 | 0.0079 | 0.0006 | 0.0014 | 0.005 | 0.03 | 0.0057 | 0.0057 | 0.0008 | 0.0029 | 0.0009 | 0.0022 | 0.0013 |
Lipid Particles | 0.001 | 0.0004 | 0.0048 | 0.0009 | 0.0007 | 0.0001 | 0.0143 | 0.0006 | 0.0026 | 0.0078 | 0.0134 | 0.0078 | 0.0136 | 0.0008 | 0.0058 | 0.0008 | 0.0025 | 0.0016 |
Mitochondria | 0.001 | 0.0017 | 0.0024 | 0.0016 | 0.0028 | 0.0011 | 0.0064 | 0.0017 | 0.0128 | 0.0095 | 0.1004 | 0.0059 | 0.008 | 0.0017 | 0.0158 | 0.0025 | 0.0027 | 0.0018 |
None | 0.0195 | 0.086 | 0.0828 | 0.1742 | 0.1739 | 0.0241 | 0.0373 | 0.1567 | 0.1782 | 0.1956 | 0.0943 | 0.043 | 0.0248 | 0.0663 | 0.0934 | 0.0968 | 0.244 | 0.013 |
Nuclear Periphery | 0.0051 | 0.0167 | 0.0089 | 0.0048 | 0.0105 | 0.0027 | 0.019 | 0.0048 | 0.0062 | 0.0107 | 0.0176 | 0.0044 | 0.0054 | 0.0076 | 0.007 | 0.0066 | 0.0089 | 0.0062 |
Nucleolus | 0.0216 | 0.0173 | 0.014 | 0.01 | 0.0343 | 0.0394 | 0.0135 | 0.009 | 0.0105 | 0.0042 | 0.005 | 0.0301 | 0.0129 | 0.0198 | 0.0059 | 0.0051 | 0.0095 | 0.0345 |
Nucleus | 0.8306 | 0.3992 | 0.246 | 0.1909 | 0.2275 | 0.7876 | 0.715 | 0.3306 | 0.1411 | 0.0947 | 0.1458 | 0.7253 | 0.8059 | 0.267 | 0.1148 | 0.0933 | 0.125 | 0.7607 |
Peroxisomes | 0.0013 | 0.0005 | 0.0009 | 0.0004 | 0.0005 | 0.0002 | 0.0244 | 0.0004 | 0.0136 | 0.0029 | 0.0128 | 0.0081 | 0.0104 | 0.0007 | 0.0068 | 0.0011 | 0.0017 | 0.0023 |
Punctate Nuclear | 0.0486 | 0.0304 | 0.0077 | 0.0032 | 0.0274 | 0.0279 | 0.0108 | 0.0049 | 0.0077 | 0.0033 | 0.0025 | 0.0072 | 0.0125 | 0.0126 | 0.0129 | 0.004 | 0.0234 | 0.0212 |
Vacuole | 0.0018 | 0.0156 | 0.0258 | 0.0486 | 0.0307 | 0.0027 | 0.0041 | 0.0123 | 0.019 | 0.0649 | 0.0167 | 0.003 | 0.0017 | 0.0208 | 0.0161 | 0.0261 | 0.0139 | 0.0041 |
Vacuole Periphery | 0.0003 | 0.0014 | 0.0026 | 0.0041 | 0.0034 | 0.0003 | 0.0025 | 0.0013 | 0.0025 | 0.0077 | 0.0047 | 0.0007 | 0.0006 | 0.0018 | 0.0024 | 0.0028 | 0.0016 | 0.0005 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 15.2887 | 5.4669 | 6.9542 | 16.5611 | 17.557 | 22.702 | 6.3172 | 9.3268 | 7.7896 | 17.6034 |
Translational Efficiency | 2.9619 | 2.2619 | 2.1482 | 1.4755 | 1.8131 | 2.3722 | 2.0837 | 1.2829 | 2.7082 | 1.9666 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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