Standard name | |
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Human Ortholog | |
Description | Para hydroxybenzoate polyprenyl transferase; catalyzes the second step in ubiquinone (coenzyme Q) biosynthesis; human COQ2, mutations in which are implicated in an increased risk of mutiple-system atrophy, can complement a yeast coq2 null mutant |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | – | – | – | 2 | 7 | 7 | 2 | 10 | 12 |
Bud | 1 | 4 | 13 | 11 | 20 | 36 | 35 | 41 | 32 | 44 | 47 | 44 | 1 | 4 | 1 | – | – | – | 0 | 2 | 0 | 1 | 2 | 5 |
Bud Neck | 0 | 1 | 2 | 1 | 1 | 5 | 0 | 0 | 1 | 4 | 2 | 5 | 3 | 1 | 1 | – | – | – | 1 | 4 | 2 | 1 | 6 | 7 |
Bud Site | 0 | 0 | 1 | 1 | 3 | 15 | 15 | 9 | 18 | 22 | 14 | 16 | 0 | 0 | 0 | – | – | – | – | – | – | – | – | – |
Cell Periphery | 0 | 4 | 2 | 2 | 2 | 2 | 2 | 1 | 4 | 4 | 4 | 0 | 3 | 1 | 8 | – | – | – | 0 | 1 | 1 | 0 | 3 | 0 |
Cytoplasm | 14 | 68 | 67 | 74 | 90 | 96 | 121 | 111 | 91 | 118 | 72 | 69 | 101 | 163 | 199 | – | – | – | 2 | 15 | 8 | 3 | 6 | 6 |
Endoplasmic Reticulum | 4 | 10 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 6 | 3 | 3 | – | – | – | 0 | 3 | 5 | 2 | 4 | 7 |
Endosome | 9 | 20 | 12 | 7 | 13 | 1 | 5 | 2 | 1 | 4 | 0 | 2 | 16 | 37 | 21 | – | – | – | 29 | 27 | 28 | 13 | 29 | 24 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | – | – | 5 | 5 | 2 | 2 | 10 | 8 |
Mitochondria | 149 | 123 | 238 | 261 | 410 | 482 | 653 | 636 | 478 | 697 | 517 | 614 | 29 | 23 | 9 | – | – | – | 139 | 210 | 251 | 142 | 238 | 289 |
Nucleus | 3 | 1 | 1 | 0 | 5 | 20 | 16 | 30 | 17 | 11 | 7 | 13 | 3 | 1 | 1 | – | – | – | 0 | 2 | 0 | 0 | 1 | 1 |
Nuclear Periphery | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 1 | 4 | 4 | 1 | 4 | 1 | 0 | 0 | – | – | – | 2 | 0 | 2 | 1 | 1 | 1 |
Nucleolus | 0 | 1 | 1 | 0 | 0 | 2 | 2 | 7 | 4 | 5 | 4 | 2 | 0 | 0 | 1 | – | – | – | 0 | 0 | 1 | 0 | 2 | 2 |
Peroxisomes | 3 | 1 | 17 | 18 | 14 | 2 | 1 | 4 | 2 | 10 | 3 | 7 | 5 | 16 | 11 | – | – | – | 7 | 6 | 14 | 6 | 13 | 8 |
SpindlePole | 3 | 6 | 24 | 21 | 20 | 28 | 48 | 59 | 36 | 89 | 47 | 61 | 6 | 8 | 11 | – | – | – | 1 | 5 | 10 | 1 | 9 | 5 |
Vac/Vac Membrane | 19 | 34 | 14 | 8 | 41 | 9 | 20 | 10 | 11 | 10 | 6 | 3 | 23 | 40 | 26 | – | – | – | 7 | 21 | 11 | 11 | 35 | 32 |
Unique Cell Count | 177 | 233 | 319 | 330 | 515 | 558 | 756 | 750 | 556 | 817 | 568 | 682 | 171 | 264 | 269 | 205 | 317 | 360 | 193 | 385 | 423 | |||
Labelled Cell Count | 206 | 275 | 393 | 407 | 619 | 700 | 918 | 912 | 700 | 1023 | 725 | 841 | 198 | 298 | 293 | 205 | 317 | 360 | 193 | 385 | 423 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.4 | 4.5 | 3.6 | 3.5 | 3.5 | 3.4 | 2.9 | 3.3 | 2.9 | 2.8 | 2.7 | 2.7 | 5.1 | 5.0 | 5.0 | – | – | – | 5.5 | 5.9 | 5.8 |
Std Deviation (1e-4) | 0.6 | 0.7 | 1.0 | 1.3 | 1.3 | 1.4 | 1.3 | 1.6 | 1.3 | 0.9 | 1.0 | 1.0 | 1.3 | 1.1 | 1.0 | – | – | – | 1.1 | 1.6 | 1.3 |
Intensity Change (Log2) | – | – | – | -0.05 | -0.02 | -0.08 | -0.29 | -0.12 | -0.29 | -0.36 | -0.41 | -0.38 | 0.5 | 0.5 | 0.49 | – | – | – | 0.61 | 0.71 | 0.7 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.5945 | 0.4357 | 0.3927 | 0.3125 | 0.4273 | 0.5192 | 2.0531 | 2.2537 | 1.9694 | 1.2927 | 2.3711 | 2.0464 | -1.2476 | -0.938 | -0.9016 | -0.8886 | -1.1562 | -0.8998 |
Actin | 0.0109 | 0.0067 | 0.0118 | 0.0047 | 0.0158 | 0.011 | 0.0354 | 0.0146 | 0.0142 | 0.0054 | 0.0323 | 0.0125 | 0.0138 | 0.0127 | 0.0088 | 0.0459 | 0.0023 | 0.0045 |
Bud | 0.0014 | 0.0118 | 0.0023 | 0.0113 | 0.0052 | 0.0035 | 0.0017 | 0.0023 | 0.0024 | 0.0037 | 0.0017 | 0.001 | 0.0008 | 0.0015 | 0.0009 | 0.0025 | 0.0006 | 0.0007 |
Bud Neck | 0.0027 | 0.0013 | 0.0022 | 0.0029 | 0.0041 | 0.0073 | 0.0015 | 0.0023 | 0.0081 | 0.0423 | 0.0024 | 0.0052 | 0.0024 | 0.0036 | 0.0082 | 0.0026 | 0.0005 | 0.0036 |
Bud Periphery | 0.0036 | 0.0079 | 0.0055 | 0.008 | 0.0083 | 0.0028 | 0.0031 | 0.004 | 0.0094 | 0.0152 | 0.0051 | 0.0043 | 0.0025 | 0.0045 | 0.003 | 0.0078 | 0.0011 | 0.0031 |
Bud Site | 0.0133 | 0.0269 | 0.0121 | 0.0148 | 0.0015 | 0.0021 | 0.0056 | 0.041 | 0.0114 | 0.0038 | 0.0019 | 0.0027 | 0.0084 | 0.0287 | 0.0053 | 0.0043 | 0.0009 | 0.0009 |
Cell Periphery | 0.0017 | 0.0014 | 0.0015 | 0.0028 | 0.0008 | 0.0006 | 0.0013 | 0.0014 | 0.0055 | 0.0017 | 0.0008 | 0.0045 | 0.0022 | 0.0021 | 0.0013 | 0.0018 | 0.0003 | 0.0011 |
Cytoplasm | 0.0212 | 0.0315 | 0.0166 | 0.0218 | 0.0251 | 0.0275 | 0.0313 | 0.0272 | 0.0335 | 0.0292 | 0.0209 | 0.0251 | 0.0197 | 0.0186 | 0.021 | 0.0398 | 0.0073 | 0.0178 |
Cytoplasmic Foci | 0.1101 | 0.0882 | 0.0745 | 0.0582 | 0.0726 | 0.0796 | 0.0995 | 0.093 | 0.0782 | 0.0528 | 0.0842 | 0.0927 | 0.085 | 0.1342 | 0.0776 | 0.0654 | 0.0356 | 0.084 |
Eisosomes | 0.001 | 0.0007 | 0.0008 | 0.0006 | 0.0014 | 0.0005 | 0.0012 | 0.0013 | 0.0029 | 0.0005 | 0.0008 | 0.0009 | 0.002 | 0.0025 | 0.0025 | 0.0017 | 0.0002 | 0.0009 |
Endoplasmic Reticulum | 0.0097 | 0.0054 | 0.0011 | 0.0016 | 0.0035 | 0.0021 | 0.0065 | 0.0014 | 0.0023 | 0.0014 | 0.0021 | 0.0015 | 0.0034 | 0.0009 | 0.0031 | 0.0026 | 0.001 | 0.0015 |
Endosome | 0.1236 | 0.1296 | 0.0831 | 0.1297 | 0.0879 | 0.0901 | 0.1167 | 0.1055 | 0.064 | 0.045 | 0.1123 | 0.0697 | 0.1122 | 0.0912 | 0.079 | 0.0608 | 0.1597 | 0.078 |
Golgi | 0.0523 | 0.0695 | 0.0351 | 0.052 | 0.0407 | 0.041 | 0.0654 | 0.0903 | 0.0408 | 0.0226 | 0.0621 | 0.0502 | 0.0535 | 0.0681 | 0.0307 | 0.042 | 0.0661 | 0.053 |
Lipid Particles | 0.0684 | 0.0193 | 0.0271 | 0.0251 | 0.0204 | 0.0292 | 0.0536 | 0.0373 | 0.0131 | 0.0099 | 0.0173 | 0.0249 | 0.1025 | 0.0277 | 0.0449 | 0.0168 | 0.0086 | 0.0493 |
Mitochondria | 0.3844 | 0.4141 | 0.5516 | 0.5891 | 0.4706 | 0.5122 | 0.3629 | 0.4428 | 0.5164 | 0.5837 | 0.4604 | 0.5203 | 0.4081 | 0.4582 | 0.5521 | 0.461 | 0.5512 | 0.5121 |
None | 0.0803 | 0.079 | 0.0956 | 0.0423 | 0.1163 | 0.0805 | 0.0962 | 0.0515 | 0.0844 | 0.0836 | 0.0951 | 0.0665 | 0.0756 | 0.0403 | 0.0627 | 0.1267 | 0.0668 | 0.069 |
Nuclear Periphery | 0.0077 | 0.0035 | 0.0011 | 0.0012 | 0.0034 | 0.0029 | 0.0061 | 0.0005 | 0.0008 | 0.0007 | 0.007 | 0.0007 | 0.0051 | 0.0002 | 0.001 | 0.0062 | 0.0004 | 0.0004 |
Nucleolus | 0.004 | 0.0038 | 0.0021 | 0.001 | 0.0013 | 0.0016 | 0.002 | 0.0008 | 0.0027 | 0.0017 | 0.001 | 0.0008 | 0.0014 | 0.0029 | 0.007 | 0.0038 | 0.0003 | 0.0009 |
Nucleus | 0.0031 | 0.0035 | 0.0017 | 0.0015 | 0.0067 | 0.0035 | 0.0047 | 0.0008 | 0.0021 | 0.0013 | 0.0035 | 0.0008 | 0.0019 | 0.0014 | 0.0016 | 0.0033 | 0.0004 | 0.0008 |
Peroxisomes | 0.0788 | 0.0748 | 0.0583 | 0.0191 | 0.0978 | 0.0858 | 0.0872 | 0.0723 | 0.0978 | 0.0829 | 0.0737 | 0.1078 | 0.0868 | 0.0933 | 0.0749 | 0.0877 | 0.0829 | 0.1072 |
Punctate Nuclear | 0.0073 | 0.0048 | 0.0064 | 0.002 | 0.0054 | 0.0047 | 0.0039 | 0.0018 | 0.0011 | 0.0023 | 0.0074 | 0.0014 | 0.0025 | 0.0013 | 0.001 | 0.0074 | 0.0003 | 0.0014 |
Vacuole | 0.0102 | 0.0107 | 0.0066 | 0.0062 | 0.0057 | 0.0075 | 0.0097 | 0.0053 | 0.0063 | 0.0075 | 0.0043 | 0.0041 | 0.007 | 0.0043 | 0.0091 | 0.0059 | 0.0076 | 0.0064 |
Vacuole Periphery | 0.0042 | 0.0055 | 0.003 | 0.0042 | 0.0054 | 0.0039 | 0.0046 | 0.0026 | 0.0027 | 0.0028 | 0.0035 | 0.0024 | 0.0035 | 0.0018 | 0.0044 | 0.0041 | 0.0058 | 0.0035 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 17.2561 | 22.9185 | 24.8557 | 23.5647 | 24.291 | 27.5945 | 18.7165 | 21.054 | 30.929 | 23.2238 |
Translational Efficiency | 1.1598 | 0.7593 | 0.8593 | 1.2205 | 0.787 | 0.7011 | 0.9954 | 1.0261 | 0.8213 | 0.7779 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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