Standard name | |
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Human Ortholog | |
Description | GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 |
Bud | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 4 | 5 | 4 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 3 | 3 | 11 | 23 | 34 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 4 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 209 | 128 | 155 | 74 | 90 | 102 | 78 | 113 | 73 | 84 | 67 | 68 | 104 | 117 | 109 | 126 | 81 | 105 | 218 | 115 | 154 | 215 | 182 | 184 |
Endoplasmic Reticulum | 2 | 2 | 0 | 1 | 2 | 1 | 0 | 4 | 1 | 2 | 4 | 3 | 2 | 3 | 3 | 7 | 15 | 7 | 1 | 2 | 7 | 5 | 4 | 6 |
Endosome | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 6 | 0 | 2 | 2 | 16 | 12 | 1 | 0 | 0 | 5 | 1 | 7 | 6 | 6 | 7 |
Golgi | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 5 | 3 | 11 | 4 | 1 | 1 | 0 | 3 | 1 | 1 |
Mitochondria | 4 | 1 | 8 | 10 | 11 | 25 | 32 | 49 | 43 | 51 | 60 | 47 | 1 | 0 | 0 | 4 | 1 | 0 | 3 | 0 | 6 | 11 | 11 | 8 |
Nucleus | 14 | 5 | 9 | 51 | 38 | 56 | 71 | 117 | 98 | 109 | 76 | 79 | 51 | 42 | 47 | 17 | 6 | 5 | 33 | 47 | 38 | 50 | 69 | 80 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 6 | 2 | 3 | 2 | 5 | 0 | 2 | 0 | 0 | 0 | 0 | 6 | 1 | 12 | 1 | 2 | 3 |
Nucleolus | 1 | 0 | 0 | 1 | 0 | 2 | 7 | 15 | 5 | 10 | 6 | 3 | 0 | 5 | 8 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 8 | 4 | 9 | 9 | 15 | 9 |
Vac/Vac Membrane | 103 | 71 | 128 | 134 | 199 | 148 | 232 | 262 | 162 | 166 | 90 | 95 | 281 | 450 | 442 | 276 | 251 | 233 | 32 | 23 | 41 | 75 | 123 | 138 |
Unique Cell Count | 280 | 182 | 250 | 241 | 312 | 301 | 378 | 512 | 341 | 383 | 259 | 275 | 376 | 582 | 585 | 367 | 309 | 307 | 325 | 208 | 288 | 404 | 459 | 489 |
Labelled Cell Count | 334 | 208 | 301 | 273 | 342 | 335 | 423 | 571 | 391 | 438 | 309 | 307 | 441 | 640 | 629 | 438 | 365 | 354 | 325 | 208 | 288 | 404 | 459 | 489 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.1 | 5.9 | 5.1 | 6.1 | 8.4 | 10.1 | 9.9 | 10.8 | 10.5 | 10.7 | 11.2 | 12.3 | 8.9 | 11.8 | 13.4 | 23.0 | 23.5 | 23.7 | 7.7 | 8.2 | 8.8 |
Std Deviation (1e-4) | 0.8 | 0.9 | 1.2 | 1.8 | 2.1 | 2.8 | 3.3 | 3.7 | 3.9 | 4.3 | 4.6 | 5.2 | 2.2 | 4.0 | 4.3 | 8.0 | 7.0 | 6.9 | 3.7 | 3.4 | 2.1 |
Intensity Change (Log2) | – | – | – | 0.27 | 0.74 | 1.0 | 0.97 | 1.09 | 1.06 | 1.08 | 1.15 | 1.29 | 0.82 | 1.23 | 1.41 | 2.18 | 2.22 | 2.23 | 0.6 | 0.7 | 0.8 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -6.9 | -7.9 | -6.6 | -10.5 | -10.8 | -10.0 | -10.2 | -8.2 | -8.6 | -8.5 | -11.8 | -12.3 | -6.8 | -8.5 | -6.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.5 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.2 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0.6 | 0.2 | 2.5 | 2.6 | 3.1 | 4.0 | 4.3 | 6.6 | 5.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 5.9 | 3.7 | 5.4 | 5.6 | 6.7 | 7.8 | 7.9 | 7.8 | 7.7 | 4.1 | 2.0 | 2.3 | 0.6 | -1.2 | -1.5 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 1.0 | 3.0 | -0.5 | 2.5 | 0 | -0.9 | -1.9 | -3.7 | -3.9 | 6.1 | 7.5 | 6.9 | 6.2 | 7.6 | 6.1 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0.0083 | 0.0002 | 0.0007 | 0.0178 | 0.0064 | 0.0003 | 0.0084 | 0.0016 | 0.0042 | 0.0016 | 0.0209 | 0.0007 | 0.2742 | 0.0006 | 0.0151 | 0.0006 | 0.0002 | 0.0008 |
Bud | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0.0008 | 0.0007 | 0.0021 | 0.0005 | 0.0001 | 0.0044 | 0.0002 | 0.0004 | 0 | 0.0001 | 0.0002 |
Bud Neck | 0.0016 | 0.0004 | 0.0006 | 0.0022 | 0.0013 | 0.0026 | 0.0054 | 0.0005 | 0.0005 | 0.0032 | 0.0009 | 0.0011 | 0.0019 | 0.0003 | 0.0005 | 0.0003 | 0.0005 | 0.002 |
Bud Periphery | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0014 | 0.0004 | 0.0006 | 0.0011 | 0.0006 | 0.0001 | 0.01 | 0.0001 | 0.0002 | 0 | 0 | 0.0002 |
Bud Site | 0.0007 | 0.0005 | 0.0002 | 0.0002 | 0.0002 | 0.0009 | 0.004 | 0.0021 | 0.0045 | 0.0134 | 0.0009 | 0.0001 | 0.0074 | 0.0006 | 0.0032 | 0 | 0.0001 | 0.0001 |
Cell Periphery | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0009 | 0.0001 | 0.0001 | 0 | 0 | 0 |
Cytoplasm | 0.0544 | 0.1541 | 0.1016 | 0.0676 | 0.0646 | 0.0764 | 0.1097 | 0.3347 | 0.1467 | 0.1091 | 0.1848 | 0.126 | 0.1506 | 0.4584 | 0.31 | 0.2063 | 0.1512 | 0.1237 |
Cytoplasmic Foci | 0.0059 | 0.0006 | 0.0005 | 0.0049 | 0.0117 | 0.001 | 0.0069 | 0.0038 | 0.0044 | 0.0193 | 0.0091 | 0.0032 | 0.0398 | 0.0015 | 0.0336 | 0.0002 | 0.0002 | 0.0041 |
Eisosomes | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0024 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0069 | 0.0045 | 0.0059 | 0.0221 | 0.0027 | 0.0045 | 0.0124 | 0.0126 | 0.0111 | 0.0081 | 0.007 | 0.0079 | 0.013 | 0.0238 | 0.01 | 0.0212 | 0.0022 | 0.0046 |
Endosome | 0.0128 | 0.0022 | 0.0034 | 0.0091 | 0.0115 | 0.0045 | 0.0231 | 0.0058 | 0.0103 | 0.0398 | 0.0197 | 0.0048 | 0.0192 | 0.0049 | 0.0548 | 0.0022 | 0.0008 | 0.0148 |
Golgi | 0.002 | 0 | 0 | 0.0011 | 0.0168 | 0.0001 | 0.002 | 0.0002 | 0.0024 | 0.0124 | 0.0135 | 0.0006 | 0.0143 | 0.0001 | 0.0041 | 0 | 0 | 0.0073 |
Lipid Particles | 0.0051 | 0 | 0 | 0.0008 | 0.0262 | 0.0001 | 0.0021 | 0.0001 | 0.0005 | 0.017 | 0.0053 | 0.0009 | 0.007 | 0.0003 | 0.0077 | 0 | 0 | 0.0345 |
Mitochondria | 0.0014 | 0.0005 | 0.0004 | 0.0007 | 0.0029 | 0.0003 | 0.0045 | 0.0007 | 0.0016 | 0.0064 | 0.0045 | 0.0007 | 0.0312 | 0.0007 | 0.0015 | 0.0005 | 0.0007 | 0.0091 |
None | 0.004 | 0.0039 | 0.0009 | 0.002 | 0.0005 | 0.002 | 0.0177 | 0.049 | 0.0206 | 0.0026 | 0.0418 | 0.0213 | 0.0063 | 0.0044 | 0.0047 | 0.0007 | 0.0012 | 0.0022 |
Nuclear Periphery | 0.1504 | 0.1 | 0.1773 | 0.1258 | 0.0591 | 0.0913 | 0.1809 | 0.1092 | 0.1766 | 0.1467 | 0.0724 | 0.106 | 0.0332 | 0.0936 | 0.1577 | 0.2496 | 0.0365 | 0.0585 |
Nucleolus | 0.0015 | 0.0006 | 0.0006 | 0.0005 | 0.0009 | 0.0021 | 0.0049 | 0.0009 | 0.0008 | 0.0033 | 0.0006 | 0.0006 | 0.0006 | 0.0004 | 0.0009 | 0.0001 | 0.0005 | 0.001 |
Nucleus | 0.7258 | 0.7248 | 0.6958 | 0.7289 | 0.778 | 0.7951 | 0.5906 | 0.4611 | 0.5982 | 0.5646 | 0.5848 | 0.7058 | 0.3392 | 0.3972 | 0.3573 | 0.5123 | 0.8018 | 0.7238 |
Peroxisomes | 0.0012 | 0 | 0 | 0.0008 | 0.0078 | 0 | 0.0005 | 0.0002 | 0.0021 | 0.0049 | 0.0034 | 0.0003 | 0.0296 | 0 | 0.0118 | 0 | 0 | 0.0028 |
Punctate Nuclear | 0.0145 | 0.0029 | 0.0083 | 0.0126 | 0.0068 | 0.0158 | 0.0118 | 0.0101 | 0.0089 | 0.032 | 0.0262 | 0.0171 | 0.004 | 0.0075 | 0.0151 | 0.0019 | 0.0025 | 0.0061 |
Vacuole | 0.0021 | 0.0034 | 0.0021 | 0.0017 | 0.0019 | 0.0018 | 0.0089 | 0.0047 | 0.0037 | 0.0091 | 0.0019 | 0.0017 | 0.004 | 0.004 | 0.0084 | 0.0019 | 0.0011 | 0.0024 |
Vacuole Periphery | 0.0012 | 0.0009 | 0.0011 | 0.001 | 0.0006 | 0.0007 | 0.0039 | 0.0013 | 0.0016 | 0.0028 | 0.0009 | 0.001 | 0.0067 | 0.0012 | 0.003 | 0.002 | 0.0005 | 0.0018 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 29.1246 | 32.7304 | 30.9112 | 47.6966 | 44.2346 | 48.2368 | 42.1193 | 53.3019 | 69.1604 | 57.4238 |
Translational Efficiency | 2.0536 | 1.5258 | 1.6945 | 1.5356 | 1.393 | 1.6018 | 1.5162 | 1.3867 | 1.412 | 1.4719 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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