Standard name | |
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Human Ortholog | |
Description | NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh3p; expression regulated by nitrogen and carbon sources; GDH1 has a paralog, GDH3, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 5 | 1 | 2 | 4 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 3 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 8 | 0 | 3 | 7 | 14 | 11 | 19 | 11 | 25 | 14 | 1 | 6 | 5 | 50 | 31 | 61 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 385 | 393 | 489 | 295 | 270 | 382 | 447 | 357 | 361 | 367 | 351 | 338 | 459 | 387 | 477 | 168 | 304 | 286 | 366 | 364 | 449 | 360 | 482 | 512 |
Endoplasmic Reticulum | 2 | 0 | 0 | 0 | 2 | 5 | 33 | 24 | 16 | 12 | 16 | 13 | 0 | 0 | 1 | 5 | 32 | 20 | 0 | 0 | 6 | 2 | 1 | 3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 2 | 1 | 3 | 4 |
Unique Cell Count | 387 | 394 | 492 | 296 | 275 | 391 | 489 | 386 | 391 | 388 | 385 | 362 | 459 | 388 | 479 | 189 | 313 | 313 | 376 | 379 | 475 | 376 | 505 | 530 |
Labelled Cell Count | 388 | 396 | 499 | 298 | 277 | 397 | 497 | 396 | 401 | 391 | 394 | 371 | 461 | 394 | 483 | 224 | 369 | 367 | 376 | 379 | 475 | 376 | 505 | 530 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 181.5 | 273.3 | 246.4 | 242.1 | 212.6 | 208.0 | 220.6 | 228.2 | 258.2 | 245.4 | 254.5 | 260.2 | 248.2 | 251.8 | 233.3 | 485.1 | 440.2 | 480.4 | 253.8 | 281.8 | 295.1 |
Std Deviation (1e-4) | 37.4 | 52.5 | 58.2 | 48.4 | 62.9 | 54.4 | 58.0 | 64.6 | 72.5 | 72.6 | 76.8 | 83.8 | 54.5 | 56.9 | 59.1 | 132.6 | 118.6 | 122.7 | 66.1 | 76.4 | 78.0 |
Intensity Change (Log2) | – | – | – | -0.03 | -0.21 | -0.24 | -0.16 | -0.11 | 0.07 | -0.01 | 0.05 | 0.08 | 0.01 | 0.03 | -0.08 | 0.98 | 0.84 | 0.96 | 0.04 | 0.19 | 0.26 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0.2 | 1.3 | 1.2 | 2.8 | 1.2 | 3.8 | 2.0 | 0 | -0.1 | -0.8 | 10.4 | 5.3 | 8.8 |
Cytoplasm | 0.5 | -1.6 | -2.2 | -6.0 | -5.4 | -5.5 | -4.3 | -6.0 | -5.0 | 1.7 | 0.8 | 0.4 | -6.7 | -2.6 | -5.9 |
Endoplasmic Reticulum | 0 | 0 | 0 | 5.9 | 5.6 | 4.5 | 3.9 | 4.6 | 4.2 | 0 | 0 | 0 | 0 | 7.2 | 5.7 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 321.0419 | 372.806 | 317.3872 | 354.1447 | 310.0826 | 414.1222 | 337.8972 | 410.6541 | 380.5093 | 332.9919 | 355.3608 | 382.7136 | 361.4084 | 427.5338 | 343.3769 | 284.7338 | 325.4174 | 279.0001 |
Actin | 0.003 | 0.0013 | 0.004 | 0.0022 | 0.0001 | 0.0001 | 0.0009 | 0.0002 | 0.0004 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0003 | 0.0114 | 0.0101 | 0.0034 | 0.0013 |
Bud | 0.0036 | 0.0003 | 0.0052 | 0.0002 | 0.0001 | 0.0001 | 0.0008 | 0.0005 | 0.0004 | 0.0003 | 0.0008 | 0.0005 | 0.0006 | 0.0005 | 0.0008 | 0.0007 | 0.0009 | 0.0005 |
Bud Neck | 0.0002 | 0.0002 | 0.0003 | 0.0002 | 0.0003 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0004 | 0.0008 | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0002 | 0.0004 |
Bud Periphery | 0.0011 | 0.0001 | 0.0085 | 0.0001 | 0 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0.0003 | 0.0002 | 0.0001 | 0.0003 | 0.0004 | 0.0006 | 0.0001 |
Bud Site | 0.0015 | 0.0005 | 0.0018 | 0.0001 | 0 | 0 | 0.0004 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0.0002 | 0.0003 | 0.0003 |
Cell Periphery | 0.0007 | 0.0005 | 0.0013 | 0.0001 | 0.0001 | 0 | 0.0013 | 0.0005 | 0.0004 | 0.0005 | 0.0015 | 0.0003 | 0.0005 | 0.0001 | 0.0005 | 0.0002 | 0.0009 | 0.0004 |
Cytoplasm | 0.8325 | 0.9467 | 0.8314 | 0.8075 | 0.9652 | 0.9371 | 0.8505 | 0.9638 | 0.9425 | 0.9063 | 0.9037 | 0.9215 | 0.8876 | 0.9708 | 0.8575 | 0.6941 | 0.707 | 0.7255 |
Cytoplasmic Foci | 0.0087 | 0.0003 | 0.0039 | 0.0002 | 0.0001 | 0.0001 | 0.0047 | 0.0004 | 0.0008 | 0.0015 | 0.0022 | 0.0016 | 0.0121 | 0.0002 | 0.0098 | 0.0008 | 0.0199 | 0.0122 |
Eisosomes | 0.0004 | 0 | 0.0007 | 0 | 0 | 0 | 0.0014 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0005 | 0 | 0.0007 | 0 | 0.0008 | 0.0001 |
Endoplasmic Reticulum | 0.001 | 0.0003 | 0.0008 | 0.0011 | 0.0001 | 0 | 0.0006 | 0.0002 | 0.0005 | 0.0004 | 0.0005 | 0.0008 | 0.0002 | 0.0001 | 0.0027 | 0.0036 | 0.0005 | 0.0038 |
Endosome | 0.0006 | 0 | 0.0008 | 0.0009 | 0.0001 | 0 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0044 | 0.005 | 0.0019 | 0.0054 |
Golgi | 0.0004 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0011 | 0.0008 | 0.0003 | 0.0003 |
Lipid Particles | 0.0037 | 0 | 0.001 | 0 | 0 | 0 | 0.0011 | 0 | 0.0003 | 0.0004 | 0.0007 | 0.0002 | 0.0012 | 0 | 0.0019 | 0.0002 | 0.005 | 0.0005 |
Mitochondria | 0.0082 | 0.0019 | 0.0261 | 0.003 | 0.0004 | 0.0005 | 0.0046 | 0.0012 | 0.001 | 0.0003 | 0.0014 | 0.0036 | 0.0159 | 0.0006 | 0.0163 | 0.0073 | 0.0424 | 0.014 |
None | 0.0071 | 0.0015 | 0.0075 | 0.0008 | 0.0001 | 0.0003 | 0.0232 | 0.0015 | 0.0036 | 0.0184 | 0.0124 | 0.0025 | 0.0161 | 0.0011 | 0.0082 | 0.0015 | 0.0227 | 0.0332 |
Nuclear Periphery | 0.0323 | 0.0048 | 0.0131 | 0.0489 | 0.0056 | 0.0024 | 0.0182 | 0.003 | 0.0109 | 0.0087 | 0.015 | 0.0087 | 0.0058 | 0.0017 | 0.0096 | 0.1451 | 0.0317 | 0.0935 |
Nucleolus | 0.0051 | 0.0128 | 0.014 | 0.0006 | 0.0001 | 0 | 0.0157 | 0.0042 | 0.0012 | 0.004 | 0.0049 | 0.0136 | 0.0149 | 0.0002 | 0.02 | 0.0015 | 0.0688 | 0.0237 |
Nucleus | 0.0813 | 0.0274 | 0.0577 | 0.1312 | 0.0257 | 0.0588 | 0.069 | 0.0212 | 0.0347 | 0.0551 | 0.0415 | 0.0423 | 0.039 | 0.0234 | 0.0451 | 0.1167 | 0.0688 | 0.0531 |
Peroxisomes | 0.0008 | 0 | 0.0009 | 0 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0007 | 0 | 0.0007 | 0.0001 | 0.0012 | 0.0004 |
Punctate Nuclear | 0.0033 | 0.0003 | 0.0087 | 0.0008 | 0 | 0.0001 | 0.0018 | 0.0003 | 0.0004 | 0.0009 | 0.0008 | 0.0003 | 0.001 | 0.0001 | 0.0013 | 0.0022 | 0.0014 | 0.0206 |
Vacuole | 0.0029 | 0.0005 | 0.0055 | 0.0006 | 0.001 | 0.0001 | 0.0034 | 0.0019 | 0.0014 | 0.002 | 0.0093 | 0.0015 | 0.0014 | 0.0003 | 0.0027 | 0.0022 | 0.0056 | 0.004 |
Vacuole Periphery | 0.0016 | 0.0004 | 0.0066 | 0.0014 | 0.0011 | 0.0001 | 0.0014 | 0.0007 | 0.0007 | 0.0005 | 0.0039 | 0.0008 | 0.0015 | 0.0002 | 0.0045 | 0.0074 | 0.0155 | 0.0066 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 357.697 | 387.3243 | 419.8565 | 430.2582 | 575.389 | 300.5416 | 281.2965 | 278.127 | 356.7722 | 388.0319 |
Translational Efficiency | 1.5471 | 1.3422 | 1.3016 | 1.4801 | 1.3931 | 1.3266 | 1.5087 | 1.3689 | 1.3107 | 1.4233 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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