Standard name
Human Ortholog
Description MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – – – – – – –
Cell Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Cytoplasm 0 0 0.08 0.12 0.08 0.07 0.07 – 0.1 0.06 0.05 0 0.15 0.16 0.24 0.12 0.15 – 0 0 0 0.05 0 0.07
Endoplasmic Reticulum 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0.1 0.06 – 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0.12 0.14 – 0 0 0.05 0 0 0
Golgi 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Mitochondria 0.26 0 0 0 0 0.1 0.11 – 0.2 0.15 0.44 0.26 0 0.07 0 0.12 0.08 – 0 0 0 0 0 0
Nucleus 0.81 0.83 0.85 0.84 0.87 0.84 0.81 – 0.78 0.78 0.7 0.78 0.85 0.69 0.73 0.38 0.48 – 0.59 0.64 0.58 0.6 0.63 0.59
Nuclear Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Nucleolus 0.05 0 0 0 0 0 0 – 0.07 0.08 0.16 0.08 0 0 0 0 0 – 0.15 0.13 0.07 0.1 0.13 0.12
Peroxisomes 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
SpindlePole 0 0 0.06 0 0.05 0 0 – 0 0 0 0 0 0.07 0 0.05 0 – 0.07 0 0.05 0.06 0.06 0.06
Vac/Vac Membrane 0 0.13 0.06 0 0 0 0 – 0 0 0 0 0 0 0 0.28 0.22 – 0.11 0.09 0.15 0.12 0.08 0.1
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 2 0 0 0
Bud 0 0 0 0 0 1 0 – 0 1 1 0 0 0 0 0 0 – 2 3 4 0 1 1
Bud Neck 0 0 1 1 2 0 1 – 0 3 1 1 0 0 0 0 0 – 0 1 0 0 0 1
Bud Site 0 0 0 0 0 2 1 – 3 4 13 8 0 0 0 0 0 – – – – – – –
Cell Periphery 0 0 1 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
Cytoplasm 6 12 13 22 18 22 21 – 20 17 16 13 4 7 19 5 13 – 1 2 4 2 2 7
Endoplasmic Reticulum 0 0 1 0 0 0 0 – 0 0 0 0 0 0 0 4 5 – 0 1 1 0 0 0
Endosome 1 8 3 2 3 4 4 – 1 0 0 1 0 1 0 5 12 – 6 10 9 0 0 1
Golgi 1 1 0 0 0 0 0 – 0 0 0 0 0 1 0 0 1 – 0 1 0 0 0 0
Mitochondria 48 4 2 5 2 34 33 – 39 43 143 89 1 3 0 5 7 – 1 4 4 0 1 1
Nucleus 152 242 137 151 186 272 247 – 155 224 227 263 23 31 58 15 41 – 132 222 115 23 57 64
Nuclear Periphery 0 0 0 0 0 1 2 – 0 2 3 1 0 0 0 0 0 – 1 1 0 0 0 0
Nucleolus 9 2 2 2 1 9 12 – 13 24 51 26 0 2 1 0 0 – 32 46 14 4 12 13
Peroxisomes 0 1 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0 0
SpindlePole 4 5 10 6 10 3 5 – 6 9 0 7 0 3 1 2 3 – 15 15 9 2 5 6
Vac/Vac Membrane 6 37 10 1 5 8 7 – 2 4 4 6 0 2 1 11 19 – 24 31 29 4 7 10
Unique Cell Count 187 290 162 180 214 324 306 200 287 325 339 27 45 79 40 85 225 348 200 40 91 109
Labelled Cell Count 227 312 180 190 227 356 333 239 331 459 415 28 50 80 47 101 225 348 200 40 91 109


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 4.3 5.8 6.0 6.1 6.7 5.5 5.9 – 4.9 5.4 4.8 4.9 6.2 6.7 5.7 6.2 7.1 – – 6.0 6.9
Std Deviation (1e-4) 0.5 0.9 1.3 1.6 2.2 1.5 2.0 – 1.3 1.5 1.5 1.0 0.9 3.0 0.8 1.0 2.2 – – 1.4 2.3
Intensity Change (Log2) – – – 0.01 0.15 -0.13 -0.02 – -0.3 -0.15 -0.32 -0.31 0.03 0.14 -0.08 0.03 0.24 – – 0.0 0.19

WT3RAP60RAP140RAP220RAP300RAP460RAP540RAP620RAP70002468WT3HU80HU120HU16002468WT3rpd3Δ_1rpd3Δ_202468WT1AF140AF18002468
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Bud 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Bud Neck 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Bud Site 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Cell Periphery 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Cytoplasm 1.3 0.1 -0.5 -0.5 – 0.6 -0.9 -1.4 -2.0 0 0 3.4 0 1.8 –
Endoplasmic Reticulum 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Endosome 0 0 0 0 – 0 0 0 0 0 0 0 0 3.8 –
Golgi 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Mitochondria 0 0 3.7 3.7 – 5.5 4.7 0 6.8 0 0 0 0 0 –
Nucleus -0.2 0.6 -0.2 -1.0 – -1.7 -1.7 -3.5 -1.8 0.1 -2.4 -2.1 -6.2 -6.0 –
Nuclear Periphery 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
Nucleolus 0 0 0 0 – 2.5 3.1 0 2.9 0 0 0 0 0 –
Peroxisomes 0 0 0 0 – 0 0 0 0 0 0 0 0 0 –
SpindlePole -1.2 -0.6 0 -2.7 – -1.5 -1.5 0 -2.4 0 0 0 0 0 –
Vacuole -2.9 -1.9 -2.0 -2.1 – -2.7 -2.8 0 -2.6 0 0 0 0 3.8 –

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration -0.1185 -0.0337 -0.0769 -0.0488 -0.7056 -0.2374 0.8659 1.49 0.9212 0.6395 0.5355 0.7448 0.7364 0.9704 0.7311 0.839 0.8061 0.4513
Actin 0.024 0.0001 0.0038 0.0186 0.0006 0.0023 0.0093 0 0.0022 0.0009 0.0005 0.0001 0.0142 0 0.0001 0.0001 0.0005 0
Bud 0.0012 0 0.0004 0.0003 0.0003 0.0002 0.0005 0.0001 0.0003 0.0002 0.0016 0 0.0001 0 0 0.0001 0.0001 0
Bud Neck 0.0023 0.0004 0.0014 0.0003 0.002 0.0033 0.0045 0.0002 0.001 0.0009 0.0018 0.001 0.0016 0.0002 0.0002 0.0007 0.0008 0.0009
Bud Periphery 0.0038 0 0.0005 0.0004 0.0005 0.0005 0.0015 0 0.0002 0.0002 0.001 0 0.0003 0.0001 0 0.0001 0.0001 0
Bud Site 0.0069 0.0005 0.0093 0.0005 0.001 0.0006 0.005 0.0006 0.0006 0.0006 0.0018 0 0.0004 0.0001 0.0001 0.0001 0.0005 0
Cell Periphery 0.0019 0 0.0002 0 0.0001 0.0001 0.0005 0 0 0 0.0002 0 0.0001 0 0 0 0 0
Cytoplasm 0.0059 0.0014 0.0037 0.0003 0.0041 0.0006 0.0034 0.0031 0.0013 0.001 0.0187 0.0002 0.0016 0.0003 0.0006 0.0015 0.0005 0.0001
Cytoplasmic Foci 0.006 0.0003 0.0085 0.0053 0.0073 0.002 0.008 0.0009 0.0043 0.0105 0.0145 0.0001 0.0021 0 0.0001 0 0.0098 0
Eisosomes 0.0004 0 0.0001 0.0001 0 0.0001 0.0002 0 0 0 0.0001 0 0.0002 0 0 0 0 0
Endoplasmic Reticulum 0.0073 0.0002 0.0004 0.0001 0.002 0.0004 0.0009 0.0001 0.0001 0.0001 0.0007 0 0.0021 0.0001 0.0001 0 0.0001 0
Endosome 0.0307 0.0002 0.0086 0.0047 0.0458 0.0135 0.0077 0.0001 0.0041 0.0012 0.012 0 0.008 0.0002 0.0003 0.0001 0.0026 0
Golgi 0.0143 0 0.0052 0.0096 0.0098 0.006 0.0026 0 0.0049 0.0021 0.0016 0 0.0022 0 0 0 0.0012 0
Lipid Particles 0.0071 0 0.0253 0.0322 0.0225 0.0109 0.0063 0 0.0033 0.002 0.0019 0 0.0017 0 0.0001 0 0.0047 0
Mitochondria 0.0207 0.0001 0.0166 0.0097 0.0198 0.0171 0.0144 0.0001 0.0031 0.0003 0.0239 0.0001 0.0015 0.0002 0.0002 0.0002 0.0008 0
None 0.0168 0.0009 0.0013 0.0002 0.0015 0.002 0.0053 0.014 0.0056 0.0004 0.013 0.0027 0.002 0.0001 0.0003 0.0001 0.0003 0
Nuclear Periphery 0.035 0.0162 0.009 0.0037 0.0255 0.0041 0.0103 0.0032 0.0021 0.004 0.0091 0.0011 0.0117 0.0041 0.0118 0.0027 0.0034 0.0006
Nucleolus 0.0253 0.0428 0.0286 0.0136 0.0677 0.0439 0.0353 0.029 0.024 0.0299 0.0597 0.0538 0.0215 0.0229 0.0241 0.0183 0.0796 0.0453
Nucleus 0.7506 0.8908 0.8364 0.8917 0.729 0.8554 0.8428 0.9229 0.8857 0.8257 0.7104 0.9044 0.9081 0.9673 0.9496 0.9676 0.833 0.9466
Peroxisomes 0.0045 0 0.0051 0.0048 0.0058 0.0031 0.0042 0 0.002 0.0194 0.0025 0 0.0005 0 0 0 0.0127 0
Punctate Nuclear 0.0258 0.0455 0.0343 0.0036 0.0447 0.03 0.0332 0.0257 0.0545 0.1004 0.1195 0.0363 0.0187 0.0034 0.0122 0.0083 0.0489 0.0061
Vacuole 0.0068 0.0001 0.0012 0.0002 0.0073 0.0024 0.003 0.0001 0.0004 0.0003 0.002 0 0.0007 0.0004 0.0001 0.0001 0.0002 0.0001
Vacuole Periphery 0.0026 0.0002 0.0004 0.0002 0.0027 0.0014 0.0012 0 0.0001 0.0001 0.0037 0 0.0006 0.0004 0.0002 0.0001 0.0002 0

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 10.594 13.1128 6.8472 11.2749 13.0312 15.7464 14.3632 13.9199 7.1796 14.6728
Translational Efficiency 0.7737 0.7813 0.891 0.469 0.5636 0.5731 0.5856 0.4963 0.8989 0.6388

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
160 878 730 1213 1999 1893 146 963 2159 2771 876 2176

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 590.37 732.66 882.48 892.96 719.29 752.17 992.79 905.28 709.74 745.99 900.87 898.41
Standard Deviation 64.07 101.96 126.86 119.81 83.71 100.20 112.78 133.87 89.07 101.17 131.23 126.37
Intensity Change Log 2 — 0.311524 0.579944 0.596976 — 0.064485 0.464915 0.331791 — 0.181105 0.517906 0.457393

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000180 0.000708 0.001083 0.001444 0.000154 0.000344 0.001490 0.002737 0.000156 0.000459 0.001151 0.002017
Bud Neck 0.000409 0.004968 0.010673 0.015224 0.004079 0.008571 0.006408 0.018437 0.003807 0.007429 0.009962 0.016646
Bud Site 0.001292 0.001973 0.003483 0.027670 0.000650 0.002907 0.001566 0.021269 0.000698 0.002611 0.003163 0.024837
Cell Periphery 0.000102 0.000129 0.000107 0.000311 0.000072 0.000097 0.000115 0.000167 0.000074 0.000107 0.000108 0.000247
Cytoplasm 0.084915 0.052963 0.018072 0.091461 0.042341 0.039265 0.010920 0.052481 0.045497 0.043605 0.016880 0.074210
Cytoplasmic Foci 0.030515 0.010971 0.000495 0.006857 0.006696 0.009813 0.000551 0.007268 0.008461 0.010180 0.000504 0.007039
Eisosomes 0.000060 0.000045 0.000039 0.000047 0.000025 0.000035 0.000081 0.000041 0.000028 0.000038 0.000046 0.000044
Endoplasmic Reticulum 0.000608 0.003851 0.007830 0.007338 0.001570 0.002764 0.013638 0.006498 0.001498 0.003108 0.008798 0.006966
Endosome 0.000562 0.001909 0.000647 0.005211 0.001077 0.003189 0.001119 0.012914 0.001039 0.002783 0.000726 0.008620
Golgi 0.000311 0.000838 0.000128 0.002700 0.000476 0.001644 0.000139 0.005915 0.000464 0.001389 0.000130 0.004123
Lipid Particles 0.003316 0.003451 0.000656 0.000893 0.002319 0.003800 0.001245 0.000929 0.002393 0.003689 0.000754 0.000909
Mitochondria 0.000888 0.006687 0.001150 0.002634 0.003049 0.009478 0.000999 0.005529 0.002889 0.008594 0.001125 0.003915
Mitotic Spindle 0.000027 0.003870 0.002428 0.029856 0.002989 0.011512 0.000804 0.047417 0.002769 0.009091 0.002157 0.037628
None 0.048236 0.019864 0.006961 0.013680 0.010493 0.012108 0.006556 0.012450 0.013290 0.014566 0.006893 0.013136
Nuclear Periphery 0.000262 0.002173 0.001099 0.002153 0.002155 0.002905 0.001954 0.003397 0.002014 0.002673 0.001241 0.002704
Nuclear Periphery Foci 0.000428 0.003075 0.000942 0.000952 0.001077 0.001517 0.007831 0.001457 0.001029 0.002011 0.002090 0.001176
Nucleolus 0.024329 0.035305 0.010638 0.004712 0.024078 0.034301 0.015510 0.005517 0.024097 0.034619 0.011450 0.005068
Nucleus 0.799395 0.841197 0.928016 0.762433 0.894430 0.847258 0.914604 0.751036 0.887387 0.845337 0.925781 0.757389
Peroxisomes 0.002531 0.002941 0.000305 0.000522 0.001149 0.002979 0.000417 0.001188 0.001251 0.002967 0.000324 0.000817
Vacuole 0.001529 0.002029 0.005062 0.022641 0.000943 0.004335 0.013834 0.034668 0.000986 0.003605 0.006524 0.027964
Vacuole Periphery 0.000105 0.001050 0.000186 0.001260 0.000179 0.001177 0.000220 0.008684 0.000174 0.001137 0.000191 0.004546

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -5.39 -9.51 -10.04 -6.00 -1.28 -4.83 -8.33 -5.10 -4.47 0.46 -7.95 -14.04 -9.71 -7.57 -1.02
Bud Neck -7.10 -11.09 -17.02 -11.70 -3.04 -5.55 -2.69 -12.53 -9.05 -6.12 -5.83 -8.74 -18.19 -13.46 -5.38
Bud Site -0.61 -2.11 -6.37 -6.57 -5.45 -4.36 -4.80 -6.52 -5.14 -5.02 -4.67 -4.65 -9.60 -8.16 -6.80
Cell Periphery -0.99 0.01 -4.94 -3.73 -5.50 -1.87 -4.77 -8.74 -3.85 -0.06 -2.99 -3.87 -9.90 -5.84 -5.37
Cytoplasm 2.56 5.69 2.11 -1.13 -10.93 0.87 8.15 -0.02 -0.73 -6.77 0.62 11.23 -1.77 -2.47 -12.63
Cytoplasmic Foci 3.48 5.14 4.78 4.88 -3.29 -2.33 9.16 5.55 6.67 -2.64 -0.95 10.53 7.14 8.07 -4.33
Eisosomes 2.08 2.05 -0.12 -4.20 -4.05 -4.76 -7.54 -11.39 -6.81 4.30 -5.60 -8.16 -14.75 -8.90 -1.24
Endoplasmic Reticulum -12.48 -17.28 -22.15 -14.30 -3.35 -6.04 -10.44 -17.80 -14.80 4.55 -10.19 -18.51 -27.12 -21.41 -0.54
Endosome -2.11 -0.60 -3.64 -1.29 -3.58 -3.14 -1.60 -3.54 -1.18 -2.85 -3.24 0.07 -4.25 -1.23 -5.05
Golgi -1.72 1.68 -1.26 -0.27 -1.97 -2.92 2.26 -1.92 0.11 -2.48 -3.17 2.67 -2.16 0.35 -3.18
Lipid Particles 0.25 3.42 3.12 4.72 -1.72 -2.60 2.21 4.85 5.81 2.72 -2.75 5.14 5.13 7.13 -0.44
Mitochondria -3.32 -2.01 -5.63 2.08 -5.39 -5.37 4.04 -1.60 4.72 -7.25 -5.56 3.82 -1.03 5.40 -8.84
Mitotic Spindle -3.50 -4.42 -8.79 -6.76 -7.07 -4.28 0.94 -8.40 -6.04 -8.76 -4.16 -0.68 -10.98 -8.16 -10.75
None 2.92 4.48 4.12 5.27 -2.43 -1.28 4.10 0.95 2.01 -2.94 -0.99 6.11 3.38 4.71 -3.46
Nuclear Periphery -4.69 -12.68 -18.84 -3.59 -9.88 -1.99 -1.23 -5.99 -4.03 -1.11 -2.02 0.23 -7.77 -5.17 -8.11
Nuclear Periphery Foci -3.53 -2.12 -2.72 2.56 0.04 -1.02 -1.42 -0.66 0.38 1.36 -2.97 -1.73 -1.34 2.22 1.26
Nucleolus -1.86 2.63 4.59 13.05 5.90 -4.42 3.35 11.81 14.65 1.94 -5.25 6.15 13.70 19.64 6.07
Nucleus -2.30 -6.20 -0.38 4.04 14.32 7.01 0.07 10.50 4.94 7.04 7.00 -4.95 13.10 6.70 17.12
Peroxisomes 0.06 2.18 2.15 4.84 -0.46 -4.33 3.99 3.84 6.58 0.04 -4.59 5.06 4.72 8.22 -0.70
Vacuole -1.31 -6.32 -13.24 -13.10 -10.48 -4.73 -6.28 -11.25 -10.21 -2.87 -5.29 -9.41 -17.52 -16.12 -11.80
Vacuole Periphery -2.53 -4.24 -3.15 1.02 -2.54 -4.28 -2.17 -2.88 -1.54 -2.78 -4.87 -2.57 -3.49 -0.72 -3.35
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication
Localization
Cell Percentages nucleus (97%)
Cell Cycle Regulation No
Subcompartmental Group nucleus-3

Rlm1

Rlm1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rlm1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available