Standard name | |
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Human Ortholog | |
Description | Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane and in vesicle fusion during sporulation; forms a complex with Sec9p that binds v-SNARE Snc2p; syntaxin homolog; functionally redundant with Sso2p; SSO1 has a paralog, SSO2, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 0 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 8 | 3 | 1 | 2 | 4 |
Bud | 5 | 0 | 0 | 3 | 8 | 3 | 5 | 9 | – | 13 | 7 | 6 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 4 | 2 | 0 | 1 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 3 | 2 | 3 | 0 | 0 | 0 | 0 | 4 | 1 | 0 | 1 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 81 | 176 | 65 | 36 | 71 | 158 | 172 | 223 | – | 265 | 165 | 225 | 75 | 90 | 172 | 47 | 61 | 40 | 5 | 41 | 15 | 8 | 8 | 9 |
Endoplasmic Reticulum | 1 | 6 | 4 | 0 | 1 | 3 | 2 | 0 | – | 0 | 0 | 1 | 16 | 8 | 4 | 11 | 11 | 7 | 1 | 3 | 4 | 3 | 4 | 4 |
Endosome | 16 | 53 | 18 | 73 | 54 | 11 | 7 | 3 | – | 6 | 3 | 1 | 21 | 66 | 67 | 83 | 117 | 86 | 70 | 112 | 73 | 62 | 78 | 72 |
Golgi | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 4 | 1 | 3 | 7 | 3 |
Mitochondria | 25 | 14 | 25 | 11 | 47 | 69 | 101 | 98 | – | 114 | 106 | 113 | 0 | 1 | 0 | 12 | 8 | 4 | 26 | 36 | 30 | 23 | 35 | 27 |
Nucleus | 1 | 2 | 0 | 0 | 1 | 1 | 1 | 3 | – | 1 | 2 | 1 | 1 | 1 | 1 | 4 | 7 | 3 | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 |
Nucleolus | 1 | 0 | 1 | 3 | 3 | 1 | 0 | 1 | – | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 3 | 6 | 3 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 3 | 3 | 2 |
SpindlePole | 3 | 3 | 12 | 28 | 19 | 11 | 2 | 3 | – | 5 | 1 | 1 | 13 | 26 | 17 | 15 | 10 | 13 | 3 | 7 | 8 | 2 | 3 | 4 |
Vac/Vac Membrane | 18 | 74 | 14 | 13 | 50 | 36 | 29 | 11 | – | 23 | 19 | 8 | 14 | 20 | 18 | 108 | 149 | 128 | 58 | 125 | 45 | 61 | 87 | 90 |
Unique Cell Count | 135 | 281 | 123 | 127 | 193 | 240 | 266 | 294 | 359 | 232 | 288 | 133 | 194 | 269 | 204 | 260 | 207 | 177 | 365 | 197 | 177 | 241 | 232 | |
Labelled Cell Count | 154 | 331 | 144 | 173 | 259 | 294 | 320 | 353 | 429 | 303 | 357 | 145 | 225 | 287 | 285 | 375 | 285 | 177 | 365 | 197 | 177 | 241 | 232 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.6 | 4.8 | 4.2 | 4.0 | 4.1 | 3.7 | 3.3 | 3.4 | – | 3.2 | 3.1 | 3.0 | 5.8 | 5.4 | 5.5 | 6.8 | 6.6 | 6.7 | 6.3 | 6.5 | 6.8 |
Std Deviation (1e-4) | 1.3 | 1.0 | 1.9 | 1.4 | 1.5 | 1.2 | 1.2 | 1.3 | – | 1.2 | 1.1 | 0.9 | 1.1 | 1.2 | 1.3 | 1.3 | 1.2 | 1.4 | 1.9 | 1.5 | 2.2 |
Intensity Change (Log2) | – | – | – | -0.08 | -0.05 | -0.16 | -0.35 | -0.31 | – | -0.41 | -0.45 | -0.47 | 0.47 | 0.37 | 0.39 | 0.71 | 0.66 | 0.69 | 0.6 | 0.63 | 0.7 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | 7.5 | 8.5 | 9.0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.6307 | 2.3083 | 1.2815 | 0.6172 | 0.2769 | 1.3935 | 2.4381 | 3.3149 | 2.9424 | 2.2325 | 2.7231 | 3.1085 | -0.2615 | 1.2243 | 0.5712 | 0.459 | 0.0104 | 0.6989 |
Actin | 0.0125 | 0.0003 | 0.0191 | 0.0001 | 0.0204 | 0.0002 | 0.0023 | 0.0001 | 0.0094 | 0.0244 | 0.0015 | 0.0023 | 0.0005 | 0.0001 | 0.0023 | 0 | 0 | 0.0001 |
Bud | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 |
Bud Neck | 0.0011 | 0.0023 | 0.0027 | 0.0003 | 0.0002 | 0.0008 | 0.0015 | 0.0003 | 0.0005 | 0.0007 | 0.0002 | 0.0005 | 0.0003 | 0.0004 | 0.0008 | 0.0002 | 0.0003 | 0.0004 |
Bud Periphery | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 | 0 | 0 |
Bud Site | 0.0036 | 0.0003 | 0.0011 | 0.0002 | 0.0002 | 0.0002 | 0.0007 | 0.0002 | 0.0006 | 0.0017 | 0.0002 | 0.0002 | 0.0003 | 0.0011 | 0.001 | 0.0001 | 0.0001 | 0.0001 |
Cell Periphery | 0.0002 | 0.0002 | 0.0005 | 0.0002 | 0 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0006 | 0.0002 | 0.0001 | 0 | 0.0001 |
Cytoplasm | 0.0104 | 0.0032 | 0.0042 | 0.009 | 0.0066 | 0.0023 | 0.0093 | 0.0046 | 0.0047 | 0.011 | 0.0054 | 0.0041 | 0.0069 | 0.0109 | 0.0088 | 0.0022 | 0.0025 | 0.0026 |
Cytoplasmic Foci | 0.1128 | 0.1064 | 0.1071 | 0.0696 | 0.0844 | 0.0846 | 0.0946 | 0.0847 | 0.1131 | 0.1484 | 0.1468 | 0.0884 | 0.0905 | 0.0779 | 0.1077 | 0.1361 | 0.1101 | 0.0827 |
Eisosomes | 0.0001 | 0.0001 | 0.0005 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0026 | 0.0013 | 0.0019 | 0.0019 | 0.0006 | 0.0009 | 0.0016 | 0.0014 | 0.0028 | 0.001 | 0.0024 | 0.0016 | 0.0018 | 0.0016 | 0.0016 | 0.0004 | 0.0003 | 0.0006 |
Endosome | 0.2662 | 0.2811 | 0.2684 | 0.4204 | 0.2801 | 0.2787 | 0.3967 | 0.3377 | 0.33 | 0.4814 | 0.3884 | 0.2796 | 0.3697 | 0.2968 | 0.3501 | 0.524 | 0.3822 | 0.2614 |
Golgi | 0.0216 | 0.0296 | 0.0343 | 0.0386 | 0.0329 | 0.0243 | 0.0334 | 0.0354 | 0.0458 | 0.0573 | 0.0314 | 0.0341 | 0.024 | 0.0227 | 0.0385 | 0.0302 | 0.0323 | 0.0282 |
Lipid Particles | 0.448 | 0.4899 | 0.4158 | 0.2706 | 0.4557 | 0.4912 | 0.3618 | 0.3972 | 0.367 | 0.2005 | 0.338 | 0.4741 | 0.4066 | 0.4799 | 0.3592 | 0.1848 | 0.395 | 0.5247 |
Mitochondria | 0.0073 | 0.0024 | 0.0097 | 0.0359 | 0.0048 | 0.0062 | 0.009 | 0.0047 | 0.006 | 0.0074 | 0.0073 | 0.0064 | 0.0069 | 0.0022 | 0.0173 | 0.0442 | 0.0022 | 0.004 |
None | 0.0332 | 0.0156 | 0.041 | 0.062 | 0.0336 | 0.0173 | 0.0078 | 0.0408 | 0.0236 | 0.0062 | 0.0072 | 0.0163 | 0.0199 | 0.0124 | 0.0196 | 0.0005 | 0.0004 | 0.0122 |
Nuclear Periphery | 0.003 | 0.0027 | 0.0085 | 0.0034 | 0.0007 | 0.004 | 0.0073 | 0.0028 | 0.0047 | 0.0016 | 0.0092 | 0.0142 | 0.0048 | 0.0061 | 0.0073 | 0.0007 | 0.0004 | 0.0082 |
Nucleolus | 0.0039 | 0.0031 | 0.0025 | 0.0007 | 0.0003 | 0.0025 | 0.0087 | 0.0019 | 0.0061 | 0.0013 | 0.0006 | 0.0031 | 0.0022 | 0.0051 | 0.0027 | 0.0006 | 0.0008 | 0.001 |
Nucleus | 0.0013 | 0.0004 | 0.0021 | 0.001 | 0.0003 | 0.0009 | 0.0086 | 0.0013 | 0.0018 | 0.0005 | 0.0008 | 0.0013 | 0.0024 | 0.0051 | 0.003 | 0.0003 | 0.0003 | 0.0005 |
Peroxisomes | 0.0331 | 0.0158 | 0.0432 | 0.0151 | 0.0577 | 0.0274 | 0.0264 | 0.0171 | 0.0403 | 0.0314 | 0.0274 | 0.0255 | 0.0164 | 0.0109 | 0.0339 | 0.017 | 0.0408 | 0.0146 |
Punctate Nuclear | 0.0045 | 0.0024 | 0.0104 | 0.001 | 0.0019 | 0.0032 | 0.0052 | 0.0009 | 0.0105 | 0.0022 | 0.0032 | 0.0038 | 0.005 | 0.0051 | 0.0046 | 0.001 | 0.0011 | 0.0022 |
Vacuole | 0.0269 | 0.0298 | 0.0189 | 0.0546 | 0.0159 | 0.0406 | 0.0189 | 0.0572 | 0.0272 | 0.0166 | 0.0189 | 0.0295 | 0.0338 | 0.051 | 0.0328 | 0.0438 | 0.0249 | 0.041 |
Vacuole Periphery | 0.0074 | 0.0129 | 0.0077 | 0.0151 | 0.0035 | 0.0144 | 0.0056 | 0.0115 | 0.0053 | 0.0056 | 0.011 | 0.0145 | 0.0075 | 0.0099 | 0.0083 | 0.0136 | 0.0061 | 0.0153 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 60.0363 | 55.3636 | 36.8901 | 73.0141 | 81.1172 | 56.845 | 45.982 | 45.1064 | 60.7747 | 84.6003 |
Translational Efficiency | 1.6759 | 1.0003 | 2.0115 | 1.5321 | 1.79 | 2.1394 | 1.2057 | 1.3178 | 1.8899 | 1.6859 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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